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The map label for this gene is ynaI [C]

Identifier: 150400633

GI number: 150400633

Start: 210984

End: 212048

Strand: Direct

Name: ynaI [C]

Synonym: Maeo_0195

Alternate gene names: 150400633

Gene position: 210984-212048 (Clockwise)

Preceding gene: 150400632

Following gene: 150400634

Centisome position: 13.44

GC content: 28.73

Gene sequence:

>1065_bases
ATGGATTTAAGCAATATTACATATTATGGAAATACAACATATGATATTATATTATTTATTTTAATTATATTTTTTGGAAT
AATTGCAGGGAGACTATTTAACACAATTATAAAAAGAAAATTAAAGAAAATAGTGAGTAAAACCAAAACTAAATTTGACG
ATATCATATTTGATGCTATTGAATTACCTGCTTCAATATTAATATTTGTATTATTTTTTTATTTTGCTTTAAATACTATA
CTAATTCCTAAAACAATTGGTATCTTATTATATGAATTAATAGATATAATGGTAATAATAGGGGCAACCTGGTTTGTGCT
TAATTTCACAGATAGTTTCATACAGCACTACATTATTCCAAGGGTAAATAAAACGGAATCTACATTTGATGACCATATAA
TAGTCCCATTACGAAAACTATTAAAATTAATAATTATATGCTTGGGGTTATTGATGGCAATAGATGCCGCAGGATATAAT
ATATCCACATTACTTGCTGGACTTGGTATTGGGGGTCTTGCTGTGGCACTTGCAGCCCAGGATACAGTTAAAAATTTTAT
ATCGGGGGTTTTATTAATAATAGATAAACCATTTAAATTAAATCAATGGATTGAATTTGACGGGGTTGAAGGAGTTGTAG
AGGATATAGGTATCAGAAGCACAAAAATAAGAACATTTAATGATAGTTTAATAATTGTGCCAAATGCAGTTGTAATAAAT
GCCAACATTGAAAACCATTCGGAGATGAAAAAAAGGAGAGTTAAAACAATTATTGGATTAACCTATGATACCCCAGTTGA
TAAATGTAAATTGGCAAAAGAAATTATACATACCATACTAGAAGACCACAGGACAACGCTCCCACCATATAGAATTACAT
TTAACGAATTCGGAGCTCATTCATTAAATTTTAGATTGGAGTATTTTATTAGAAATATGGGTTTTGATTATTATCTTAAT
GCAGTTGATGATATAAACATGAGAATAAAAGAAGAATTTGAAAAAGAAGGCATTGAAATGGCATTTCCTACCCAAACAAT
ATATTTGAAGAAGGGGGACAACTAA

Upstream 100 bases:

>100_bases
AAACTAATCTCTACCATATTATCAATAAATGAAGAAATTCATTAATAATAGGACAGATGAGGGACAGTTATTGAAGATTA
ACTATAAAGGTGGTAATATA

Downstream 100 bases:

>100_bases
TATATAAAATATAAAAAATGGGGACATATTATGGAAATTATTTCAATAAATGACAAACAAGATTTAAAAAAAATATTTGA
AGAAACTAAAACCATAGCCA

Product: MscS mechanosensitive ion channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MDLSNITYYGNTTYDIILFILIIFFGIIAGRLFNTIIKRKLKKIVSKTKTKFDDIIFDAIELPASILIFVLFFYFALNTI
LIPKTIGILLYELIDIMVIIGATWFVLNFTDSFIQHYIIPRVNKTESTFDDHIIVPLRKLLKLIIICLGLLMAIDAAGYN
ISTLLAGLGIGGLAVALAAQDTVKNFISGVLLIIDKPFKLNQWIEFDGVEGVVEDIGIRSTKIRTFNDSLIIVPNAVVIN
ANIENHSEMKKRRVKTIIGLTYDTPVDKCKLAKEIIHTILEDHRTTLPPYRITFNEFGAHSLNFRLEYFIRNMGFDYYLN
AVDDINMRIKEEFEKEGIEMAFPTQTIYLKKGDN

Sequences:

>Translated_354_residues
MDLSNITYYGNTTYDIILFILIIFFGIIAGRLFNTIIKRKLKKIVSKTKTKFDDIIFDAIELPASILIFVLFFYFALNTI
LIPKTIGILLYELIDIMVIIGATWFVLNFTDSFIQHYIIPRVNKTESTFDDHIIVPLRKLLKLIIICLGLLMAIDAAGYN
ISTLLAGLGIGGLAVALAAQDTVKNFISGVLLIIDKPFKLNQWIEFDGVEGVVEDIGIRSTKIRTFNDSLIIVPNAVVIN
ANIENHSEMKKRRVKTIIGLTYDTPVDKCKLAKEIIHTILEDHRTTLPPYRITFNEFGAHSLNFRLEYFIRNMGFDYYLN
AVDDINMRIKEEFEKEGIEMAFPTQTIYLKKGDN
>Mature_354_residues
MDLSNITYYGNTTYDIILFILIIFFGIIAGRLFNTIIKRKLKKIVSKTKTKFDDIIFDAIELPASILIFVLFFYFALNTI
LIPKTIGILLYELIDIMVIIGATWFVLNFTDSFIQHYIIPRVNKTESTFDDHIIVPLRKLLKLIIICLGLLMAIDAAGYN
ISTLLAGLGIGGLAVALAAQDTVKNFISGVLLIIDKPFKLNQWIEFDGVEGVVEDIGIRSTKIRTFNDSLIIVPNAVVIN
ANIENHSEMKKRRVKTIIGLTYDTPVDKCKLAKEIIHTILEDHRTTLPPYRITFNEFGAHSLNFRLEYFIRNMGFDYYLN
AVDDINMRIKEEFEKEGIEMAFPTQTIYLKKGDN

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=220, Percent_Identity=35, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1789291, Length=240, Percent_Identity=32.9166666666667, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1786670, Length=276, Percent_Identity=23.5507246376812, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI2367355, Length=268, Percent_Identity=26.4925373134328, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 40378; Mature: 40378

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSNITYYGNTTYDIILFILIIFFGIIAGRLFNTIIKRKLKKIVSKTKTKFDDIIFDAI
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELPASILIFVLFFYFALNTILIPKTIGILLYELIDIMVIIGATWFVLNFTDSFIQHYIIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHCC
RVNKTESTFDDHIIVPLRKLLKLIIICLGLLMAIDAAGYNISTLLAGLGIGGLAVALAAQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHH
DTVKNFISGVLLIIDKPFKLNQWIEFDGVEGVVEDIGIRSTKIRTFNDSLIIVPNAVVIN
HHHHHHHCCEEEEECCCCCCCCCEECCCCHHHHHHCCCCCEEEEEECCCEEEECCEEEEE
ANIENHSEMKKRRVKTIIGLTYDTPVDKCKLAKEIIHTILEDHRTTLPPYRITFNEFGAH
CCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCCC
SLNFRLEYFIRNMGFDYYLNAVDDINMRIKEEFEKEGIEMAFPTQTIYLKKGDN
CHHHHHHHHHHHCCCHHEECCHHHCHHHHHHHHHHCCCEEECCCEEEEEEECCC
>Mature Secondary Structure
MDLSNITYYGNTTYDIILFILIIFFGIIAGRLFNTIIKRKLKKIVSKTKTKFDDIIFDAI
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELPASILIFVLFFYFALNTILIPKTIGILLYELIDIMVIIGATWFVLNFTDSFIQHYIIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHCC
RVNKTESTFDDHIIVPLRKLLKLIIICLGLLMAIDAAGYNISTLLAGLGIGGLAVALAAQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHH
DTVKNFISGVLLIIDKPFKLNQWIEFDGVEGVVEDIGIRSTKIRTFNDSLIIVPNAVVIN
HHHHHHHCCEEEEECCCCCCCCCEECCCCHHHHHHCCCCCEEEEEECCCEEEECCEEEEE
ANIENHSEMKKRRVKTIIGLTYDTPVDKCKLAKEIIHTILEDHRTTLPPYRITFNEFGAH
CCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCCC
SLNFRLEYFIRNMGFDYYLNAVDDINMRIKEEFEKEGIEMAFPTQTIYLKKGDN
CHHHHHHHHHHHCCCHHEECCHHHCHHHHHHHHHHCCCEEECCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]