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The map label for this gene is 150400615

Identifier: 150400615

GI number: 150400615

Start: 195526

End: 196029

Strand: Reverse

Name: 150400615

Synonym: Maeo_0177

Alternate gene names: NA

Gene position: 196029-195526 (Counterclockwise)

Preceding gene: 150400616

Following gene: 150400614

Centisome position: 12.49

GC content: 28.97

Gene sequence:

>504_bases
ATGATAATAACAACATCACGAAAACCTTCTCAAAAAACCCGAAGTTTTGTAAATGATTTAGCAAGAGTTTTGGGATTGTC
AGTATTTAACAGAGGTAAAACTCCCATAAATAAAATATCTGAAAAATATCCTAAATATATATTAGTCGGAGAATATACTG
GAAATCCTGGCAGGGTGGAGCTCCATGATACCAGAAATAATCAGGTAATCTCCATGCTAATATCTGCAAAACTTCAAAGA
GAAGTATGCAATAAAGAAATAGCAAACCCCACTAGACTATTAGACATATCATTTGACAGACTATATAATGAAGAATGTGG
GGAATACAACTATAAAGAACTGTTTTTAGAATTTTTCGATGAACTAAATGAAGATTCAGATTTTAAAATGAGTTTTGAAG
GTTCTGATGGTAGAAATTTGTTTTATATTCAATTTTATAATAAAGATGAAAAAATAGGACCTTTAATAATAGTTAAGTCT
ATTAAAATTATGGATAAGGAATAA

Upstream 100 bases:

>100_bases
TTACCCAGGATGAATTAGGAATGAAAGCAAAATGTCCATATTGTAGTAATAAGTTATTAATTAAATTAAGAACTAGAATA
ATTAAAGAAGTGAAGGCAAG

Downstream 100 bases:

>100_bases
TACAATAAATAATAAAATAATAAAATAATAAAAATAAAATATAAATAATACATACAAGGTTAATTATGGAAATAAAAAAT
AAACCAAATTTTACCTTAAA

Product: ribosomal biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MIITTSRKPSQKTRSFVNDLARVLGLSVFNRGKTPINKISEKYPKYILVGEYTGNPGRVELHDTRNNQVISMLISAKLQR
EVCNKEIANPTRLLDISFDRLYNEECGEYNYKELFLEFFDELNEDSDFKMSFEGSDGRNLFYIQFYNKDEKIGPLIIVKS
IKIMDKE

Sequences:

>Translated_167_residues
MIITTSRKPSQKTRSFVNDLARVLGLSVFNRGKTPINKISEKYPKYILVGEYTGNPGRVELHDTRNNQVISMLISAKLQR
EVCNKEIANPTRLLDISFDRLYNEECGEYNYKELFLEFFDELNEDSDFKMSFEGSDGRNLFYIQFYNKDEKIGPLIIVKS
IKIMDKE
>Mature_167_residues
MIITTSRKPSQKTRSFVNDLARVLGLSVFNRGKTPINKISEKYPKYILVGEYTGNPGRVELHDTRNNQVISMLISAKLQR
EVCNKEIANPTRLLDISFDRLYNEECGEYNYKELFLEFFDELNEDSDFKMSFEGSDGRNLFYIQFYNKDEKIGPLIIVKS
IKIMDKE

Specific function: Probably involved in the biogenesis of the ribosome [H]

COG id: COG2136

COG function: function code JA; Predicted exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP) component, contains IMP4 domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Brix domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004154
- InterPro:   IPR007109 [H]

Pfam domain/function: PF04427 Brix [H]

EC number: NA

Molecular weight: Translated: 19482; Mature: 19482

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS50833 BRIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIITTSRKPSQKTRSFVNDLARVLGLSVFNRGKTPINKISEKYPKYILVGEYTGNPGRVE
CEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEECCCCCEEE
LHDTRNNQVISMLISAKLQREVCNKEIANPTRLLDISFDRLYNEECGEYNYKELFLEFFD
EEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHH
ELNEDSDFKMSFEGSDGRNLFYIQFYNKDEKIGPLIIVKSIKIMDKE
HHCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEEEEEECCC
>Mature Secondary Structure
MIITTSRKPSQKTRSFVNDLARVLGLSVFNRGKTPINKISEKYPKYILVGEYTGNPGRVE
CEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEECCCCCEEE
LHDTRNNQVISMLISAKLQREVCNKEIANPTRLLDISFDRLYNEECGEYNYKELFLEFFD
EEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHH
ELNEDSDFKMSFEGSDGRNLFYIQFYNKDEKIGPLIIVKSIKIMDKE
HHCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]