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The map label for this gene is pfdB

Identifier: 150400613

GI number: 150400613

Start: 194760

End: 195107

Strand: Reverse

Name: pfdB

Synonym: Maeo_0175

Alternate gene names: 150400613

Gene position: 195107-194760 (Counterclockwise)

Preceding gene: 150400614

Following gene: 150400612

Centisome position: 12.43

GC content: 31.61

Gene sequence:

>348_bases
ATGGATATGCCAGCAAATATTCAAAATCAATTAATGCAGTTTCAACAACTCCAACAGCAATTACAAACAATTGTTATGCA
AAAACAACAATTGGAAGCCCAAATAAAAGAAATGGAAAAAGCAATGGAAGAAATGGAAAAATCCGAAGATAGCACCGTAT
ATAAAATGGCAGGCGGAATTCTAGTAAGTAGAAACAAGGAAGATGTAAAAGAAGAATTAAGCGAAAAAGTAGAAACCTAC
AAAGTAAGAATTACAACATTTGCAAAACAAGAAGAAAAAATGCAAAAAAGATTAACAGACATGCAGGAATCATTGCAAAA
AGCACTTCAAGGAACTAATATAGCATAA

Upstream 100 bases:

>100_bases
AATAATATTGAATAATTATTTTATATAGTTCCGATATGTTTTTATTTATCATACATAAAATACATATGAAAAAAGATAAA
GTAGTAAAAGAGGGAAAATT

Downstream 100 bases:

>100_bases
TTCTTTTTTATTATTTTTATTTATCTTATTTTTTAATGACCTCATTTAGATATTAAACATTTCAACGCTTTTTAAATTAT
TATATATTGTCTTTCAGAAT

Product: prefoldin, beta subunit

Products: NA

Alternate protein names: GimC subunit beta

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MDMPANIQNQLMQFQQLQQQLQTIVMQKQQLEAQIKEMEKAMEEMEKSEDSTVYKMAGGILVSRNKEDVKEELSEKVETY
KVRITTFAKQEEKMQKRLTDMQESLQKALQGTNIA

Sequences:

>Translated_115_residues
MDMPANIQNQLMQFQQLQQQLQTIVMQKQQLEAQIKEMEKAMEEMEKSEDSTVYKMAGGILVSRNKEDVKEELSEKVETY
KVRITTFAKQEEKMQKRLTDMQESLQKALQGTNIA
>Mature_115_residues
MDMPANIQNQLMQFQQLQQQLQTIVMQKQQLEAQIKEMEKAMEEMEKSEDSTVYKMAGGILVSRNKEDVKEELSEKVETY
KVRITTFAKQEEKMQKRLTDMQESLQKALQGTNIA

Specific function: Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding

COG id: COG1382

COG function: function code O; Prefoldin, chaperonin cofactor

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prefoldin subunit beta family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PFDB_META3 (A6UTE5)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001324379.1
- ProteinModelPortal:   A6UTE5
- SMR:   A6UTE5
- STRING:   A6UTE5
- GeneID:   5327595
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_0175
- eggNOG:   arNOG14126
- HOGENOM:   HBG726985
- OMA:   ELPPQIQ
- ProtClustDB:   CLSK876412
- BioCyc:   MAEO419665:MAEO_0175-MONOMER
- HAMAP:   MF_00307
- InterPro:   IPR012713
- InterPro:   IPR002777
- InterPro:   IPR009053
- TIGRFAMs:   TIGR02338

Pfam domain/function: PF01920 Prefoldin_2; SSF46579 Prefoldin

EC number: NA

Molecular weight: Translated: 13447; Mature: 13447

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.7 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.7 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMPANIQNQLMQFQQLQQQLQTIVMQKQQLEAQIKEMEKAMEEMEKSEDSTVYKMAGGI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCH
LVSRNKEDVKEELSEKVETYKVRITTFAKQEEKMQKRLTDMQESLQKALQGTNIA
HEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDMPANIQNQLMQFQQLQQQLQTIVMQKQQLEAQIKEMEKAMEEMEKSEDSTVYKMAGGI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCH
LVSRNKEDVKEELSEKVETYKVRITTFAKQEEKMQKRLTDMQESLQKALQGTNIA
HEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA