| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400582
Identifier: 150400582
GI number: 150400582
Start: 162341
End: 163147
Strand: Reverse
Name: 150400582
Synonym: Maeo_0144
Alternate gene names: NA
Gene position: 163147-162341 (Counterclockwise)
Preceding gene: 150400583
Following gene: 150400581
Centisome position: 10.39
GC content: 28.0
Gene sequence:
>807_bases TTGTTGCAAAATACTGTGGATAATATAGCTCATTGTAATAAATTACGAAATGTTAATCCAAAATTAAAAGTAATATTTTC AATAATTACGCTGTTAATTTGTGTATTATCCCAATCAATTATTGTTCCACTTATTATAACCATATTGATGGTTTATTTAA CTTTATTCAGGGCAAATGTTCCGAAAAAAATATATTTACAATTTATGGGAGCTCCTGTTGGATTTGGAATAATCACCGTA ATTCTTATGGCATTTATATATAATCAGGGAGCTCCGTTATTTTCAATAGGTTTATTTGGTTTTAAAATCTCTGCGTCTAA ATATGGGGTTGAGCTTGGATTATTAATATTTAGTAGAATGCTAGGAGGAGTGTCATCAACATTATTTTTAACCTTAACAA CACCCATGACAGAATTATTTTTCGTATTAAAGGAACTTAAAGTTCCAACCGTAATGCTCGATATTGCCATGATGATGTAT AGGTATGTATTTGTATTATTGGATGAAATGATTAGAACTGAAAATGCTCAAAAAACAAGAGTTGGATATAGGAATTTATC AACGACATATAAATCATTGGGCATGTTGGCATCAAATTTATTTATAAGAACTTGGGATAGAGGAGAGGTCCTATTTACTA CCATGAGCTCCCGATGTTATAATGGAGATTTAAAAATATTAGGAAAAATAGAAAACCCAAAAATAGTGTATTTATTAATG TGTACCATATTTTGGATAATATTAATATCAATATCATATATTACAAAAGATTTTAAACTATTGGAGTATATTAATAGTTA TTATTAA
Upstream 100 bases:
>100_bases CGAATTTCTTCGTTTATTTGTAATATAAAAAGATTAGCTTTTAATTATGGCATATTTAAAAAAGACCGAAGATTAAATAT AATATATACGGGTGAAAATT
Downstream 100 bases:
>100_bases TATAGTTGATATTTATTATTAATATTATAATTATAAATACGGTGAATAAATGGCAATTATTGAAGCAAAGGACATTGTAT ATAAATACCCAGATGGAACT
Product: cobalt ABC transporter, inner membrane subunit CbiQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MLQNTVDNIAHCNKLRNVNPKLKVIFSIITLLICVLSQSIIVPLIITILMVYLTLFRANVPKKIYLQFMGAPVGFGIITV ILMAFIYNQGAPLFSIGLFGFKISASKYGVELGLLIFSRMLGGVSSTLFLTLTTPMTELFFVLKELKVPTVMLDIAMMMY RYVFVLLDEMIRTENAQKTRVGYRNLSTTYKSLGMLASNLFIRTWDRGEVLFTTMSSRCYNGDLKILGKIENPKIVYLLM CTIFWIILISISYITKDFKLLEYINSYY
Sequences:
>Translated_268_residues MLQNTVDNIAHCNKLRNVNPKLKVIFSIITLLICVLSQSIIVPLIITILMVYLTLFRANVPKKIYLQFMGAPVGFGIITV ILMAFIYNQGAPLFSIGLFGFKISASKYGVELGLLIFSRMLGGVSSTLFLTLTTPMTELFFVLKELKVPTVMLDIAMMMY RYVFVLLDEMIRTENAQKTRVGYRNLSTTYKSLGMLASNLFIRTWDRGEVLFTTMSSRCYNGDLKILGKIENPKIVYLLM CTIFWIILISISYITKDFKLLEYINSYY >Mature_268_residues MLQNTVDNIAHCNKLRNVNPKLKVIFSIITLLICVLSQSIIVPLIITILMVYLTLFRANVPKKIYLQFMGAPVGFGIITV ILMAFIYNQGAPLFSIGLFGFKISASKYGVELGLLIFSRMLGGVSSTLFLTLTTPMTELFFVLKELKVPTVMLDIAMMMY RYVFVLLDEMIRTENAQKTRVGYRNLSTTYKSLGMLASNLFIRTWDRGEVLFTTMSSRCYNGDLKILGKIENPKIVYLLM CTIFWIILISISYITKDFKLLEYINSYY
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbiQ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003339 - InterPro: IPR012809 [H]
Pfam domain/function: PF02361 CbiQ [H]
EC number: NA
Molecular weight: Translated: 30604; Mature: 30604
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQNTVDNIAHCNKLRNVNPKLKVIFSIITLLICVLSQSIIVPLIITILMVYLTLFRANV CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PKKIYLQFMGAPVGFGIITVILMAFIYNQGAPLFSIGLFGFKISASKYGVELGLLIFSRM CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHEEEECHHHHHHHHHHHHHHH LGGVSSTLFLTLTTPMTELFFVLKELKVPTVMLDIAMMMYRYVFVLLDEMIRTENAQKTR HCCCCHHEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VGYRNLSTTYKSLGMLASNLFIRTWDRGEVLFTTMSSRCYNGDLKILGKIENPKIVYLLM HHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEHHCHHCCCCEEEEEECCCCCHHHHHH CTIFWIILISISYITKDFKLLEYINSYY HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLQNTVDNIAHCNKLRNVNPKLKVIFSIITLLICVLSQSIIVPLIITILMVYLTLFRANV CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PKKIYLQFMGAPVGFGIITVILMAFIYNQGAPLFSIGLFGFKISASKYGVELGLLIFSRM CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHEEEECHHHHHHHHHHHHHHH LGGVSSTLFLTLTTPMTELFFVLKELKVPTVMLDIAMMMYRYVFVLLDEMIRTENAQKTR HCCCCHHEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VGYRNLSTTYKSLGMLASNLFIRTWDRGEVLFTTMSSRCYNGDLKILGKIENPKIVYLLM HHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEHHCHHCCCCEEEEEECCCCCHHHHHH CTIFWIILISISYITKDFKLLEYINSYY HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]