Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is rplX

Identifier: 150400562

GI number: 150400562

Start: 140492

End: 140713

Strand: Reverse

Name: rplX

Synonym: Maeo_0124

Alternate gene names: 150400562

Gene position: 140713-140492 (Counterclockwise)

Preceding gene: 150400563

Following gene: 150400558

Centisome position: 8.97

GC content: 30.63

Gene sequence:

>222_bases
ATGCCAAAAATATACAGAATAAAAGGAAAAATTGTTGGAAAAGATGAACCAATGGTATTTACAAAAGAATACAAAGCTAT
GAAAGAAGAAGATGCAATTGAAAAAATATATTCAGAAATTGGAAGCAAACACAATGTTAAAAGGGCATCAATAAAAATCA
TTGAAGTTAGCGAAATTTCGGCTGACGAAGTTCAAGACCCAATTTTACAGGCTGTGCTTTAA

Upstream 100 bases:

>100_bases
TACCACAGGACCAGAGATGTTAAAAATAGAAGAAGGATTGGATTTAATAGATTAAACCTAAAATATAAAATTAAACATAA
AAAAGGAAAAAGGTGAAAAT

Downstream 100 bases:

>100_bases
TTTTTTATATCGTAGTTATAAAATAGGGAGCTCCGGAGCTCCCTTATATTATATTTGTTTTTTATATTTTTTACTGTAAT
TTATCCTGTTTTATTAGTGC

Product: 50S ribosomal protein LX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MPKIYRIKGKIVGKDEPMVFTKEYKAMKEEDAIEKIYSEIGSKHNVKRASIKIIEVSEISADEVQDPILQAVL

Sequences:

>Translated_73_residues
MPKIYRIKGKIVGKDEPMVFTKEYKAMKEEDAIEKIYSEIGSKHNVKRASIKIIEVSEISADEVQDPILQAVL
>Mature_72_residues
PKIYRIKGKIVGKDEPMVFTKEYKAMKEEDAIEKIYSEIGSKHNVKRASIKIIEVSEISADEVQDPILQAVL

Specific function: Unknown

COG id: COG2157

COG function: function code J; Ribosomal protein L20A (L18A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein LX family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RLX_META3 (A6UT94)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001324328.1
- ProteinModelPortal:   A6UT94
- SMR:   A6UT94
- STRING:   A6UT94
- GeneID:   5327016
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_0124
- eggNOG:   arNOG14074
- HOGENOM:   HBG733155
- OMA:   FTKEYRA
- ProtClustDB:   PRK00773
- BioCyc:   MAEO419665:MAEO_0124-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00273
- InterPro:   IPR002670
- InterPro:   IPR021138
- InterPro:   IPR002768
- PANTHER:   PTHR10052:SF1
- ProDom:   PD010302

Pfam domain/function: PF01775 Ribosomal_L18ae

EC number: NA

Molecular weight: Translated: 8321; Mature: 8190

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIYRIKGKIVGKDEPMVFTKEYKAMKEEDAIEKIYSEIGSKHNVKRASIKIIEVSEIS
CCCEEEECCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC
ADEVQDPILQAVL
HHHHHHHHHHHCC
>Mature Secondary Structure 
PKIYRIKGKIVGKDEPMVFTKEYKAMKEEDAIEKIYSEIGSKHNVKRASIKIIEVSEIS
CCEEEECCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC
ADEVQDPILQAVL
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA