| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is rplX
Identifier: 150400562
GI number: 150400562
Start: 140492
End: 140713
Strand: Reverse
Name: rplX
Synonym: Maeo_0124
Alternate gene names: 150400562
Gene position: 140713-140492 (Counterclockwise)
Preceding gene: 150400563
Following gene: 150400558
Centisome position: 8.97
GC content: 30.63
Gene sequence:
>222_bases ATGCCAAAAATATACAGAATAAAAGGAAAAATTGTTGGAAAAGATGAACCAATGGTATTTACAAAAGAATACAAAGCTAT GAAAGAAGAAGATGCAATTGAAAAAATATATTCAGAAATTGGAAGCAAACACAATGTTAAAAGGGCATCAATAAAAATCA TTGAAGTTAGCGAAATTTCGGCTGACGAAGTTCAAGACCCAATTTTACAGGCTGTGCTTTAA
Upstream 100 bases:
>100_bases TACCACAGGACCAGAGATGTTAAAAATAGAAGAAGGATTGGATTTAATAGATTAAACCTAAAATATAAAATTAAACATAA AAAAGGAAAAAGGTGAAAAT
Downstream 100 bases:
>100_bases TTTTTTATATCGTAGTTATAAAATAGGGAGCTCCGGAGCTCCCTTATATTATATTTGTTTTTTATATTTTTTACTGTAAT TTATCCTGTTTTATTAGTGC
Product: 50S ribosomal protein LX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MPKIYRIKGKIVGKDEPMVFTKEYKAMKEEDAIEKIYSEIGSKHNVKRASIKIIEVSEISADEVQDPILQAVL
Sequences:
>Translated_73_residues MPKIYRIKGKIVGKDEPMVFTKEYKAMKEEDAIEKIYSEIGSKHNVKRASIKIIEVSEISADEVQDPILQAVL >Mature_72_residues PKIYRIKGKIVGKDEPMVFTKEYKAMKEEDAIEKIYSEIGSKHNVKRASIKIIEVSEISADEVQDPILQAVL
Specific function: Unknown
COG id: COG2157
COG function: function code J; Ribosomal protein L20A (L18A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein LX family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RLX_META3 (A6UT94)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001324328.1 - ProteinModelPortal: A6UT94 - SMR: A6UT94 - STRING: A6UT94 - GeneID: 5327016 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_0124 - eggNOG: arNOG14074 - HOGENOM: HBG733155 - OMA: FTKEYRA - ProtClustDB: PRK00773 - BioCyc: MAEO419665:MAEO_0124-MONOMER - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_00273 - InterPro: IPR002670 - InterPro: IPR021138 - InterPro: IPR002768 - PANTHER: PTHR10052:SF1 - ProDom: PD010302
Pfam domain/function: PF01775 Ribosomal_L18ae
EC number: NA
Molecular weight: Translated: 8321; Mature: 8190
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKIYRIKGKIVGKDEPMVFTKEYKAMKEEDAIEKIYSEIGSKHNVKRASIKIIEVSEIS CCCEEEECCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC ADEVQDPILQAVL HHHHHHHHHHHCC >Mature Secondary Structure PKIYRIKGKIVGKDEPMVFTKEYKAMKEEDAIEKIYSEIGSKHNVKRASIKIIEVSEIS CCEEEECCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC ADEVQDPILQAVL HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA