Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150400553

Identifier: 150400553

GI number: 150400553

Start: 126346

End: 128457

Strand: Reverse

Name: 150400553

Synonym: Maeo_0115

Alternate gene names: NA

Gene position: 128457-126346 (Counterclockwise)

Preceding gene: 150400554

Following gene: 150400552

Centisome position: 8.18

GC content: 25.52

Gene sequence:

>2112_bases
ATGAAGAAATTATCTCTATTTTTAAAATTATTTTTATTATCTTTTTTGGTTGTGGGGGTTAATTATGCAGAAAATATAAC
TGTGGAATTAACTCCTAACAATACAAATACAATAGTTGGAGATACAATTAATTTAGATTTATTTGTAAAAAATATTCCAA
ATGATACAAAATGTAGTGGATTTGAAACTACCTTATCTTATGATTCAAATTTACTGAATTTAACAGACATAAAATTAAGT
GATATTTCAAATAATGCAGATCTAAAAGAGGCAGATTTATCAACAGGATCTATTAAGATAGCATGGTTCTCCAACGAACC
ATCTGGAAATATTACAATAGCATCGTTATCATTTAAGACACTAAATGAGGCAACCAGTCCTCCAGCAACAATATCCCTAT
CATCTAAAACAGCTGTATCCAATATAAATGGAGTTGGATATAATAATATTACGATAATTAATTCAAACATTACAATAAAT
CCACTAAATCAAACCGTGGGCATAATTACGATAAATGATTTTGAATTAAATAAAAATATTGATGCAGTTTTATCATTAAA
TGGTGCCAAAATTCCAATTAAAAATATATCTGGAAATATCTATTTTAACAATGTTTCAATTGAAAATAATCCCTATCCAA
CAGGAATATTATGTGATGAATTTAGAGTATATAATTTATCAAATAATCAAATGTCATTTTATGTTGTGCCAAATAGCAAA
TATGAAAATAATACCATGTTTGATTTTTTAAAAATACCTATAATTGTCAATAACAGCAAATACAATATCTCAATGGATTT
AATGGTAAATGGAAAGGAAATTAAAAATATTACAGTGCAAACAAAAGAAACACAAGAAAATATATCAAATTTTGTTGGGC
TAATATTCTATGTAGATGATGGATACAATGAAAACACAAACCTATCATTAGGATATTCAAAAGAAATTAAATTAAAAACC
TACAATATTAATGAAAATTTAACAAATTTTTCAGGCTATTTGTATATAAATAATTCATTATTTGAAGTAAATGAATACGA
GATTTCAAAATACTCTACAATATATGATAAAGTAAATAATTCAAATATTACATTAAATGGGGATTATCTATATTTTAATA
TCTCATTAAATAATGGAACAAATGGGACATATAGTATTTTAAAATTTAAAATATCTCCAAAAACCAATATTAATACCACT
TCAAAATTATTTGTTGGAAATTTATCAATTTATTCAAATTATACAAAAATAGAGCTCCCTACAAAAAATTTAACTGTAAA
TGTCATAGAGAGAGGGGCAAATATGCCACCATCTGCAAAAATCATAATGTCTATGCACAATAACAAGGTTGTAAATTTTT
ATGCCCTATGCTATGATGCAGACGATAGTGAATTAAATTATGAGTGGGATTTTGGAGATGGTGACTATTCCACGAATCAA
AATCCAATACATACATATTCAAATTATACAGATTATTCGGTAAAATTAACAGTAAAAGATACATTAAATGCATCTGATGA
AGTTAAAATTATAATACCAATTAACAAATATAATCCATTAAATTACTCCCTTTCAGAGAGTGAAATAATAGGAAAAGATG
GAGAAAATAAAACGGTCTTTTTAAAATTAAACATAAGTAATCCACTACCATATCAAGTTAATGCCTATGTTGATTTTGTA
GAGTATGCAGATATCGGAGCTCCGAGAAATCAATATAATTTTGAATTAAATCCCAATGAAACAAAAAATATGATTATTCC
AATAAATCTATCTAAAACTTCAACCATAAAGTGGAATCTTGCATATTATCCCCTTAATAAAAAAATGGATAATGCAGAAT
TATCATATTATACTTGGAGCTTTGACAAAAAAGTTAAAATTGTCTCGTCCGAAAAAATAGATGTAATAAAATATACTAAA
AATATCTCAATAAATAGTTCAAAAGTAATTGTAAATATAAACAGGCAGAAAGTACCAAAAACTATTGTAATTAATAAAAC
CATCGATTTAGATTATGTGGAAAAGTCTGATATTATTTATTATTGCCTAATATCTATTGTAGGCTTTATAGCTGGTTTAG
TTGTTGCGAAACATATTGGTGCTATTTTCTAA

Upstream 100 bases:

>100_bases
AAGTGCATAAAGATTATACTTTTCTAACAGCGATATTTTTAGTTAGTTTAGTTAGTGGGGTGGCATTTCGCCTTACATCT
AAAATATAATGGTGAATAAT

Downstream 100 bases:

>100_bases
TGAATTAACAAATAATATTATAAATAATATAAAAAAATTTAAAAATAAATCATGCCGTTAAAAAGCAGGTGAAAAATTGC
ATTTTAAAAGATTTTCTGTT

Product: PKD domain-containing protein

Products: NA

Alternate protein names: PKD Domain-Containing Protein; APHP Domain Protein; APHP Domain-Containing Protein; PKD Domain Containing Protein

Number of amino acids: Translated: 703; Mature: 703

Protein sequence:

>703_residues
MKKLSLFLKLFLLSFLVVGVNYAENITVELTPNNTNTIVGDTINLDLFVKNIPNDTKCSGFETTLSYDSNLLNLTDIKLS
DISNNADLKEADLSTGSIKIAWFSNEPSGNITIASLSFKTLNEATSPPATISLSSKTAVSNINGVGYNNITIINSNITIN
PLNQTVGIITINDFELNKNIDAVLSLNGAKIPIKNISGNIYFNNVSIENNPYPTGILCDEFRVYNLSNNQMSFYVVPNSK
YENNTMFDFLKIPIIVNNSKYNISMDLMVNGKEIKNITVQTKETQENISNFVGLIFYVDDGYNENTNLSLGYSKEIKLKT
YNINENLTNFSGYLYINNSLFEVNEYEISKYSTIYDKVNNSNITLNGDYLYFNISLNNGTNGTYSILKFKISPKTNINTT
SKLFVGNLSIYSNYTKIELPTKNLTVNVIERGANMPPSAKIIMSMHNNKVVNFYALCYDADDSELNYEWDFGDGDYSTNQ
NPIHTYSNYTDYSVKLTVKDTLNASDEVKIIIPINKYNPLNYSLSESEIIGKDGENKTVFLKLNISNPLPYQVNAYVDFV
EYADIGAPRNQYNFELNPNETKNMIIPINLSKTSTIKWNLAYYPLNKKMDNAELSYYTWSFDKKVKIVSSEKIDVIKYTK
NISINSSKVIVNINRQKVPKTIVINKTIDLDYVEKSDIIYYCLISIVGFIAGLVVAKHIGAIF

Sequences:

>Translated_703_residues
MKKLSLFLKLFLLSFLVVGVNYAENITVELTPNNTNTIVGDTINLDLFVKNIPNDTKCSGFETTLSYDSNLLNLTDIKLS
DISNNADLKEADLSTGSIKIAWFSNEPSGNITIASLSFKTLNEATSPPATISLSSKTAVSNINGVGYNNITIINSNITIN
PLNQTVGIITINDFELNKNIDAVLSLNGAKIPIKNISGNIYFNNVSIENNPYPTGILCDEFRVYNLSNNQMSFYVVPNSK
YENNTMFDFLKIPIIVNNSKYNISMDLMVNGKEIKNITVQTKETQENISNFVGLIFYVDDGYNENTNLSLGYSKEIKLKT
YNINENLTNFSGYLYINNSLFEVNEYEISKYSTIYDKVNNSNITLNGDYLYFNISLNNGTNGTYSILKFKISPKTNINTT
SKLFVGNLSIYSNYTKIELPTKNLTVNVIERGANMPPSAKIIMSMHNNKVVNFYALCYDADDSELNYEWDFGDGDYSTNQ
NPIHTYSNYTDYSVKLTVKDTLNASDEVKIIIPINKYNPLNYSLSESEIIGKDGENKTVFLKLNISNPLPYQVNAYVDFV
EYADIGAPRNQYNFELNPNETKNMIIPINLSKTSTIKWNLAYYPLNKKMDNAELSYYTWSFDKKVKIVSSEKIDVIKYTK
NISINSSKVIVNINRQKVPKTIVINKTIDLDYVEKSDIIYYCLISIVGFIAGLVVAKHIGAIF
>Mature_703_residues
MKKLSLFLKLFLLSFLVVGVNYAENITVELTPNNTNTIVGDTINLDLFVKNIPNDTKCSGFETTLSYDSNLLNLTDIKLS
DISNNADLKEADLSTGSIKIAWFSNEPSGNITIASLSFKTLNEATSPPATISLSSKTAVSNINGVGYNNITIINSNITIN
PLNQTVGIITINDFELNKNIDAVLSLNGAKIPIKNISGNIYFNNVSIENNPYPTGILCDEFRVYNLSNNQMSFYVVPNSK
YENNTMFDFLKIPIIVNNSKYNISMDLMVNGKEIKNITVQTKETQENISNFVGLIFYVDDGYNENTNLSLGYSKEIKLKT
YNINENLTNFSGYLYINNSLFEVNEYEISKYSTIYDKVNNSNITLNGDYLYFNISLNNGTNGTYSILKFKISPKTNINTT
SKLFVGNLSIYSNYTKIELPTKNLTVNVIERGANMPPSAKIIMSMHNNKVVNFYALCYDADDSELNYEWDFGDGDYSTNQ
NPIHTYSNYTDYSVKLTVKDTLNASDEVKIIIPINKYNPLNYSLSESEIIGKDGENKTVFLKLNISNPLPYQVNAYVDFV
EYADIGAPRNQYNFELNPNETKNMIIPINLSKTSTIKWNLAYYPLNKKMDNAELSYYTWSFDKKVKIVSSEKIDVIKYTK
NISINSSKVIVNINRQKVPKTIVINKTIDLDYVEKSDIIYYCLISIVGFIAGLVVAKHIGAIF

Specific function: Unknown

COG id: COG3291

COG function: function code R; FOG: PKD repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79190; Mature: 79190

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS50093 PKD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSLFLKLFLLSFLVVGVNYAENITVELTPNNTNTIVGDTINLDLFVKNIPNDTKCSG
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECEEEEEEEEECCCCCCCCCC
FETTLSYDSNLLNLTDIKLSDISNNADLKEADLSTGSIKIAWFSNEPSGNITIASLSFKT
EEEEEECCCCEEEEEEEEEECCCCCCCCEECCCCCCEEEEEEECCCCCCCEEEEEEEEEE
LNEATSPPATISLSSKTAVSNINGVGYNNITIINSNITINPLNQTVGIITINDFELNKNI
HHCCCCCCEEEEECCCCEECCCCCCCCCEEEEEECCEEEEECCCEEEEEEEEEEEECCCC
DAVLSLNGAKIPIKNISGNIYFNNVSIENNPYPTGILCDEFRVYNLSNNQMSFYVVPNSK
EEEEEECCCEEEEEECCCEEEEEEEEECCCCCCCCEEECCEEEEEECCCCEEEEEEECCC
YENNTMFDFLKIPIIVNNSKYNISMDLMVNGKEIKNITVQTKETQENISNFVGLIFYVDD
CCCCCEEEEEEEEEEECCCEEEEEEEEEECCCEEEEEEEEECHHHHHHCCEEEEEEEEEC
GYNENTNLSLGYSKEIKLKTYNINENLTNFSGYLYINNSLFEVNEYEISKYSTIYDKVNN
CCCCCCEEEEECCCEEEEEEEECCCCCCCCEEEEEECCCEEEECCEECCEEEEEECCCCC
SNITLNGDYLYFNISLNNGTNGTYSILKFKISPKTNINTTSKLFVGNLSIYSNYTKIELP
CEEEEECCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEEEEECEEEEEEC
TKNLTVNVIERGANMPPSAKIIMSMHNNKVVNFYALCYDADDSELNYEWDFGDGDYSTNQ
CCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCCC
NPIHTYSNYTDYSVKLTVKDTLNASDEVKIIIPINKYNPLNYSLSESEIIGKDGENKTVF
CCEEECCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCEEE
LKLNISNPLPYQVNAYVDFVEYADIGAPRNQYNFELNPNETKNMIIPINLSKTSTIKWNL
EEEECCCCCCEEEEEEEEEEEHHCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEE
AYYPLNKKMDNAELSYYTWSFDKKVKIVSSEKIDVIKYTKNISINSSKVIVNINRQKVPK
EEEECCCCCCCCEEEEEEEECCCEEEEEECCCEEEEEEEECEEECCCEEEEEECCCCCCE
TIVINKTIDLDYVEKSDIIYYCLISIVGFIAGLVVAKHIGAIF
EEEEEEEECEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKLSLFLKLFLLSFLVVGVNYAENITVELTPNNTNTIVGDTINLDLFVKNIPNDTKCSG
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECEEEEEEEEECCCCCCCCCC
FETTLSYDSNLLNLTDIKLSDISNNADLKEADLSTGSIKIAWFSNEPSGNITIASLSFKT
EEEEEECCCCEEEEEEEEEECCCCCCCCEECCCCCCEEEEEEECCCCCCCEEEEEEEEEE
LNEATSPPATISLSSKTAVSNINGVGYNNITIINSNITINPLNQTVGIITINDFELNKNI
HHCCCCCCEEEEECCCCEECCCCCCCCCEEEEEECCEEEEECCCEEEEEEEEEEEECCCC
DAVLSLNGAKIPIKNISGNIYFNNVSIENNPYPTGILCDEFRVYNLSNNQMSFYVVPNSK
EEEEEECCCEEEEEECCCEEEEEEEEECCCCCCCCEEECCEEEEEECCCCEEEEEEECCC
YENNTMFDFLKIPIIVNNSKYNISMDLMVNGKEIKNITVQTKETQENISNFVGLIFYVDD
CCCCCEEEEEEEEEEECCCEEEEEEEEEECCCEEEEEEEEECHHHHHHCCEEEEEEEEEC
GYNENTNLSLGYSKEIKLKTYNINENLTNFSGYLYINNSLFEVNEYEISKYSTIYDKVNN
CCCCCCEEEEECCCEEEEEEEECCCCCCCCEEEEEECCCEEEECCEECCEEEEEECCCCC
SNITLNGDYLYFNISLNNGTNGTYSILKFKISPKTNINTTSKLFVGNLSIYSNYTKIELP
CEEEEECCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEEEEECEEEEEEC
TKNLTVNVIERGANMPPSAKIIMSMHNNKVVNFYALCYDADDSELNYEWDFGDGDYSTNQ
CCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCCC
NPIHTYSNYTDYSVKLTVKDTLNASDEVKIIIPINKYNPLNYSLSESEIIGKDGENKTVF
CCEEECCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCEEE
LKLNISNPLPYQVNAYVDFVEYADIGAPRNQYNFELNPNETKNMIIPINLSKTSTIKWNL
EEEECCCCCCEEEEEEEEEEEHHCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEE
AYYPLNKKMDNAELSYYTWSFDKKVKIVSSEKIDVIKYTKNISINSSKVIVNINRQKVPK
EEEECCCCCCCCEEEEEEEECCCEEEEEECCCEEEEEEEECEEECCCEEEEEECCCCCCE
TIVINKTIDLDYVEKSDIIYYCLISIVGFIAGLVVAKHIGAIF
EEEEEEEECEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA