| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400553
Identifier: 150400553
GI number: 150400553
Start: 126346
End: 128457
Strand: Reverse
Name: 150400553
Synonym: Maeo_0115
Alternate gene names: NA
Gene position: 128457-126346 (Counterclockwise)
Preceding gene: 150400554
Following gene: 150400552
Centisome position: 8.18
GC content: 25.52
Gene sequence:
>2112_bases ATGAAGAAATTATCTCTATTTTTAAAATTATTTTTATTATCTTTTTTGGTTGTGGGGGTTAATTATGCAGAAAATATAAC TGTGGAATTAACTCCTAACAATACAAATACAATAGTTGGAGATACAATTAATTTAGATTTATTTGTAAAAAATATTCCAA ATGATACAAAATGTAGTGGATTTGAAACTACCTTATCTTATGATTCAAATTTACTGAATTTAACAGACATAAAATTAAGT GATATTTCAAATAATGCAGATCTAAAAGAGGCAGATTTATCAACAGGATCTATTAAGATAGCATGGTTCTCCAACGAACC ATCTGGAAATATTACAATAGCATCGTTATCATTTAAGACACTAAATGAGGCAACCAGTCCTCCAGCAACAATATCCCTAT CATCTAAAACAGCTGTATCCAATATAAATGGAGTTGGATATAATAATATTACGATAATTAATTCAAACATTACAATAAAT CCACTAAATCAAACCGTGGGCATAATTACGATAAATGATTTTGAATTAAATAAAAATATTGATGCAGTTTTATCATTAAA TGGTGCCAAAATTCCAATTAAAAATATATCTGGAAATATCTATTTTAACAATGTTTCAATTGAAAATAATCCCTATCCAA CAGGAATATTATGTGATGAATTTAGAGTATATAATTTATCAAATAATCAAATGTCATTTTATGTTGTGCCAAATAGCAAA TATGAAAATAATACCATGTTTGATTTTTTAAAAATACCTATAATTGTCAATAACAGCAAATACAATATCTCAATGGATTT AATGGTAAATGGAAAGGAAATTAAAAATATTACAGTGCAAACAAAAGAAACACAAGAAAATATATCAAATTTTGTTGGGC TAATATTCTATGTAGATGATGGATACAATGAAAACACAAACCTATCATTAGGATATTCAAAAGAAATTAAATTAAAAACC TACAATATTAATGAAAATTTAACAAATTTTTCAGGCTATTTGTATATAAATAATTCATTATTTGAAGTAAATGAATACGA GATTTCAAAATACTCTACAATATATGATAAAGTAAATAATTCAAATATTACATTAAATGGGGATTATCTATATTTTAATA TCTCATTAAATAATGGAACAAATGGGACATATAGTATTTTAAAATTTAAAATATCTCCAAAAACCAATATTAATACCACT TCAAAATTATTTGTTGGAAATTTATCAATTTATTCAAATTATACAAAAATAGAGCTCCCTACAAAAAATTTAACTGTAAA TGTCATAGAGAGAGGGGCAAATATGCCACCATCTGCAAAAATCATAATGTCTATGCACAATAACAAGGTTGTAAATTTTT ATGCCCTATGCTATGATGCAGACGATAGTGAATTAAATTATGAGTGGGATTTTGGAGATGGTGACTATTCCACGAATCAA AATCCAATACATACATATTCAAATTATACAGATTATTCGGTAAAATTAACAGTAAAAGATACATTAAATGCATCTGATGA AGTTAAAATTATAATACCAATTAACAAATATAATCCATTAAATTACTCCCTTTCAGAGAGTGAAATAATAGGAAAAGATG GAGAAAATAAAACGGTCTTTTTAAAATTAAACATAAGTAATCCACTACCATATCAAGTTAATGCCTATGTTGATTTTGTA GAGTATGCAGATATCGGAGCTCCGAGAAATCAATATAATTTTGAATTAAATCCCAATGAAACAAAAAATATGATTATTCC AATAAATCTATCTAAAACTTCAACCATAAAGTGGAATCTTGCATATTATCCCCTTAATAAAAAAATGGATAATGCAGAAT TATCATATTATACTTGGAGCTTTGACAAAAAAGTTAAAATTGTCTCGTCCGAAAAAATAGATGTAATAAAATATACTAAA AATATCTCAATAAATAGTTCAAAAGTAATTGTAAATATAAACAGGCAGAAAGTACCAAAAACTATTGTAATTAATAAAAC CATCGATTTAGATTATGTGGAAAAGTCTGATATTATTTATTATTGCCTAATATCTATTGTAGGCTTTATAGCTGGTTTAG TTGTTGCGAAACATATTGGTGCTATTTTCTAA
Upstream 100 bases:
>100_bases AAGTGCATAAAGATTATACTTTTCTAACAGCGATATTTTTAGTTAGTTTAGTTAGTGGGGTGGCATTTCGCCTTACATCT AAAATATAATGGTGAATAAT
Downstream 100 bases:
>100_bases TGAATTAACAAATAATATTATAAATAATATAAAAAAATTTAAAAATAAATCATGCCGTTAAAAAGCAGGTGAAAAATTGC ATTTTAAAAGATTTTCTGTT
Product: PKD domain-containing protein
Products: NA
Alternate protein names: PKD Domain-Containing Protein; APHP Domain Protein; APHP Domain-Containing Protein; PKD Domain Containing Protein
Number of amino acids: Translated: 703; Mature: 703
Protein sequence:
>703_residues MKKLSLFLKLFLLSFLVVGVNYAENITVELTPNNTNTIVGDTINLDLFVKNIPNDTKCSGFETTLSYDSNLLNLTDIKLS DISNNADLKEADLSTGSIKIAWFSNEPSGNITIASLSFKTLNEATSPPATISLSSKTAVSNINGVGYNNITIINSNITIN PLNQTVGIITINDFELNKNIDAVLSLNGAKIPIKNISGNIYFNNVSIENNPYPTGILCDEFRVYNLSNNQMSFYVVPNSK YENNTMFDFLKIPIIVNNSKYNISMDLMVNGKEIKNITVQTKETQENISNFVGLIFYVDDGYNENTNLSLGYSKEIKLKT YNINENLTNFSGYLYINNSLFEVNEYEISKYSTIYDKVNNSNITLNGDYLYFNISLNNGTNGTYSILKFKISPKTNINTT SKLFVGNLSIYSNYTKIELPTKNLTVNVIERGANMPPSAKIIMSMHNNKVVNFYALCYDADDSELNYEWDFGDGDYSTNQ NPIHTYSNYTDYSVKLTVKDTLNASDEVKIIIPINKYNPLNYSLSESEIIGKDGENKTVFLKLNISNPLPYQVNAYVDFV EYADIGAPRNQYNFELNPNETKNMIIPINLSKTSTIKWNLAYYPLNKKMDNAELSYYTWSFDKKVKIVSSEKIDVIKYTK NISINSSKVIVNINRQKVPKTIVINKTIDLDYVEKSDIIYYCLISIVGFIAGLVVAKHIGAIF
Sequences:
>Translated_703_residues MKKLSLFLKLFLLSFLVVGVNYAENITVELTPNNTNTIVGDTINLDLFVKNIPNDTKCSGFETTLSYDSNLLNLTDIKLS DISNNADLKEADLSTGSIKIAWFSNEPSGNITIASLSFKTLNEATSPPATISLSSKTAVSNINGVGYNNITIINSNITIN PLNQTVGIITINDFELNKNIDAVLSLNGAKIPIKNISGNIYFNNVSIENNPYPTGILCDEFRVYNLSNNQMSFYVVPNSK YENNTMFDFLKIPIIVNNSKYNISMDLMVNGKEIKNITVQTKETQENISNFVGLIFYVDDGYNENTNLSLGYSKEIKLKT YNINENLTNFSGYLYINNSLFEVNEYEISKYSTIYDKVNNSNITLNGDYLYFNISLNNGTNGTYSILKFKISPKTNINTT SKLFVGNLSIYSNYTKIELPTKNLTVNVIERGANMPPSAKIIMSMHNNKVVNFYALCYDADDSELNYEWDFGDGDYSTNQ NPIHTYSNYTDYSVKLTVKDTLNASDEVKIIIPINKYNPLNYSLSESEIIGKDGENKTVFLKLNISNPLPYQVNAYVDFV EYADIGAPRNQYNFELNPNETKNMIIPINLSKTSTIKWNLAYYPLNKKMDNAELSYYTWSFDKKVKIVSSEKIDVIKYTK NISINSSKVIVNINRQKVPKTIVINKTIDLDYVEKSDIIYYCLISIVGFIAGLVVAKHIGAIF >Mature_703_residues MKKLSLFLKLFLLSFLVVGVNYAENITVELTPNNTNTIVGDTINLDLFVKNIPNDTKCSGFETTLSYDSNLLNLTDIKLS DISNNADLKEADLSTGSIKIAWFSNEPSGNITIASLSFKTLNEATSPPATISLSSKTAVSNINGVGYNNITIINSNITIN PLNQTVGIITINDFELNKNIDAVLSLNGAKIPIKNISGNIYFNNVSIENNPYPTGILCDEFRVYNLSNNQMSFYVVPNSK YENNTMFDFLKIPIIVNNSKYNISMDLMVNGKEIKNITVQTKETQENISNFVGLIFYVDDGYNENTNLSLGYSKEIKLKT YNINENLTNFSGYLYINNSLFEVNEYEISKYSTIYDKVNNSNITLNGDYLYFNISLNNGTNGTYSILKFKISPKTNINTT SKLFVGNLSIYSNYTKIELPTKNLTVNVIERGANMPPSAKIIMSMHNNKVVNFYALCYDADDSELNYEWDFGDGDYSTNQ NPIHTYSNYTDYSVKLTVKDTLNASDEVKIIIPINKYNPLNYSLSESEIIGKDGENKTVFLKLNISNPLPYQVNAYVDFV EYADIGAPRNQYNFELNPNETKNMIIPINLSKTSTIKWNLAYYPLNKKMDNAELSYYTWSFDKKVKIVSSEKIDVIKYTK NISINSSKVIVNINRQKVPKTIVINKTIDLDYVEKSDIIYYCLISIVGFIAGLVVAKHIGAIF
Specific function: Unknown
COG id: COG3291
COG function: function code R; FOG: PKD repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79190; Mature: 79190
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS50093 PKD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSLFLKLFLLSFLVVGVNYAENITVELTPNNTNTIVGDTINLDLFVKNIPNDTKCSG CCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECEEEEEEEEECCCCCCCCCC FETTLSYDSNLLNLTDIKLSDISNNADLKEADLSTGSIKIAWFSNEPSGNITIASLSFKT EEEEEECCCCEEEEEEEEEECCCCCCCCEECCCCCCEEEEEEECCCCCCCEEEEEEEEEE LNEATSPPATISLSSKTAVSNINGVGYNNITIINSNITINPLNQTVGIITINDFELNKNI HHCCCCCCEEEEECCCCEECCCCCCCCCEEEEEECCEEEEECCCEEEEEEEEEEEECCCC DAVLSLNGAKIPIKNISGNIYFNNVSIENNPYPTGILCDEFRVYNLSNNQMSFYVVPNSK EEEEEECCCEEEEEECCCEEEEEEEEECCCCCCCCEEECCEEEEEECCCCEEEEEEECCC YENNTMFDFLKIPIIVNNSKYNISMDLMVNGKEIKNITVQTKETQENISNFVGLIFYVDD CCCCCEEEEEEEEEEECCCEEEEEEEEEECCCEEEEEEEEECHHHHHHCCEEEEEEEEEC GYNENTNLSLGYSKEIKLKTYNINENLTNFSGYLYINNSLFEVNEYEISKYSTIYDKVNN CCCCCCEEEEECCCEEEEEEEECCCCCCCCEEEEEECCCEEEECCEECCEEEEEECCCCC SNITLNGDYLYFNISLNNGTNGTYSILKFKISPKTNINTTSKLFVGNLSIYSNYTKIELP CEEEEECCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEEEEECEEEEEEC TKNLTVNVIERGANMPPSAKIIMSMHNNKVVNFYALCYDADDSELNYEWDFGDGDYSTNQ CCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCCC NPIHTYSNYTDYSVKLTVKDTLNASDEVKIIIPINKYNPLNYSLSESEIIGKDGENKTVF CCEEECCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCEEE LKLNISNPLPYQVNAYVDFVEYADIGAPRNQYNFELNPNETKNMIIPINLSKTSTIKWNL EEEECCCCCCEEEEEEEEEEEHHCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEE AYYPLNKKMDNAELSYYTWSFDKKVKIVSSEKIDVIKYTKNISINSSKVIVNINRQKVPK EEEECCCCCCCCEEEEEEEECCCEEEEEECCCEEEEEEEECEEECCCEEEEEECCCCCCE TIVINKTIDLDYVEKSDIIYYCLISIVGFIAGLVVAKHIGAIF EEEEEEEECEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKLSLFLKLFLLSFLVVGVNYAENITVELTPNNTNTIVGDTINLDLFVKNIPNDTKCSG CCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECEEEEEEEEECCCCCCCCCC FETTLSYDSNLLNLTDIKLSDISNNADLKEADLSTGSIKIAWFSNEPSGNITIASLSFKT EEEEEECCCCEEEEEEEEEECCCCCCCCEECCCCCCEEEEEEECCCCCCCEEEEEEEEEE LNEATSPPATISLSSKTAVSNINGVGYNNITIINSNITINPLNQTVGIITINDFELNKNI HHCCCCCCEEEEECCCCEECCCCCCCCCEEEEEECCEEEEECCCEEEEEEEEEEEECCCC DAVLSLNGAKIPIKNISGNIYFNNVSIENNPYPTGILCDEFRVYNLSNNQMSFYVVPNSK EEEEEECCCEEEEEECCCEEEEEEEEECCCCCCCCEEECCEEEEEECCCCEEEEEEECCC YENNTMFDFLKIPIIVNNSKYNISMDLMVNGKEIKNITVQTKETQENISNFVGLIFYVDD CCCCCEEEEEEEEEEECCCEEEEEEEEEECCCEEEEEEEEECHHHHHHCCEEEEEEEEEC GYNENTNLSLGYSKEIKLKTYNINENLTNFSGYLYINNSLFEVNEYEISKYSTIYDKVNN CCCCCCEEEEECCCEEEEEEEECCCCCCCCEEEEEECCCEEEECCEECCEEEEEECCCCC SNITLNGDYLYFNISLNNGTNGTYSILKFKISPKTNINTTSKLFVGNLSIYSNYTKIELP CEEEEECCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEEEEECEEEEEEC TKNLTVNVIERGANMPPSAKIIMSMHNNKVVNFYALCYDADDSELNYEWDFGDGDYSTNQ CCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCCC NPIHTYSNYTDYSVKLTVKDTLNASDEVKIIIPINKYNPLNYSLSESEIIGKDGENKTVF CCEEECCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCEEE LKLNISNPLPYQVNAYVDFVEYADIGAPRNQYNFELNPNETKNMIIPINLSKTSTIKWNL EEEECCCCCCEEEEEEEEEEEHHCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEE AYYPLNKKMDNAELSYYTWSFDKKVKIVSSEKIDVIKYTKNISINSSKVIVNINRQKVPK EEEECCCCCCCCEEEEEEEECCCEEEEEECCCEEEEEEEECEEECCCEEEEEECCCCCCE TIVINKTIDLDYVEKSDIIYYCLISIVGFIAGLVVAKHIGAIF EEEEEEEECEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA