| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is 150400528
Identifier: 150400528
GI number: 150400528
Start: 93949
End: 94581
Strand: Reverse
Name: 150400528
Synonym: Maeo_0090
Alternate gene names: NA
Gene position: 94581-93949 (Counterclockwise)
Preceding gene: 150400530
Following gene: 150400527
Centisome position: 6.03
GC content: 37.28
Gene sequence:
>633_bases TTGCATATTCCTGATGGATTTTTACCGATATGGGAAGCCGGATTATTATGGCTTGTTTCATTGGTATGTATTGGTTTGTC CCTTAAATGGGCATCAAAAGAAATGAATGAAAAAACAGTCCCTCTTTTTGCAGCAGTGGCAGCAGGTATATTTGCTATTC AAGCTATGAATATACCAATACCATGGGGAACCAGCGGACATATGGGCGGTGCGGCATTAGCATCTATCATATTTGATAGT CCCTGGGCTGGTGTGTTAATGTTAGCTCTTGTGTTAATTGTTCAAGGTTTATTCTTTGCAGATGGAGGAATATTGGCAAT GGGTGCAAATGTATTCAATATGGGTATAATTAGTGCATTTGTTGGATATTATGTATTTAAATCACTTAAAAAGGTAAATA TTGCCGTTGCAGCATTTGGTGCCGGTTGGTTTGCTTTATTCCTAGGTGCTATTGTTTGTGCTATTGAAATGGCAGTTGCT GGAACATTCCCATTAGATAAAGGATTACAGTTCATGGGATTATACCATGCAGCAATAGGATTTATTGAAGGAGGTATAAC GGCAGTAGTAATTCAATATATATCCTCAGTTAGACCTGATTTAATAAAAGGATTGGGTGGTAATAATGAATAA
Upstream 100 bases:
>100_bases AAATCAAATAAAAAACTATAAATAATACTATTTTTAATATAATATTATTGTAATACCAAATATAAAATAAATATTACAAA ATGTAAAAAAAGGTGAAAAT
Downstream 100 bases:
>100_bases AATATTAATTTCAGGACTTGCCGTTGCATTAATTATTGGGTTATTAGCTCCTTTTTTAGCATCAGGAAACCCTGATGGAT TGGAAAGTGCAGCAGAAAAA
Product: cobalt transport protein CbiM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MHIPDGFLPIWEAGLLWLVSLVCIGLSLKWASKEMNEKTVPLFAAVAAGIFAIQAMNIPIPWGTSGHMGGAALASIIFDS PWAGVLMLALVLIVQGLFFADGGILAMGANVFNMGIISAFVGYYVFKSLKKVNIAVAAFGAGWFALFLGAIVCAIEMAVA GTFPLDKGLQFMGLYHAAIGFIEGGITAVVIQYISSVRPDLIKGLGGNNE
Sequences:
>Translated_210_residues MHIPDGFLPIWEAGLLWLVSLVCIGLSLKWASKEMNEKTVPLFAAVAAGIFAIQAMNIPIPWGTSGHMGGAALASIIFDS PWAGVLMLALVLIVQGLFFADGGILAMGANVFNMGIISAFVGYYVFKSLKKVNIAVAAFGAGWFALFLGAIVCAIEMAVA GTFPLDKGLQFMGLYHAAIGFIEGGITAVVIQYISSVRPDLIKGLGGNNE >Mature_210_residues MHIPDGFLPIWEAGLLWLVSLVCIGLSLKWASKEMNEKTVPLFAAVAAGIFAIQAMNIPIPWGTSGHMGGAALASIIFDS PWAGVLMLALVLIVQGLFFADGGILAMGANVFNMGIISAFVGYYVFKSLKKVNIAVAAFGAGWFALFLGAIVCAIEMAVA GTFPLDKGLQFMGLYHAAIGFIEGGITAVVIQYISSVRPDLIKGLGGNNE
Specific function: Unknown
COG id: COG0310
COG function: function code P; ABC-type Co2+ transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002751 [H]
Pfam domain/function: PF01891 CbiM [H]
EC number: NA
Molecular weight: Translated: 22069; Mature: 22069
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIPDGFLPIWEAGLLWLVSLVCIGLSLKWASKEMNEKTVPLFAAVAAGIFAIQAMNIPI CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC PWGTSGHMGGAALASIIFDSPWAGVLMLALVLIVQGLFFADGGILAMGANVFNMGIISAF CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH VGYYVFKSLKKVNIAVAAFGAGWFALFLGAIVCAIEMAVAGTFPLDKGLQFMGLYHAAIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH FIEGGITAVVIQYISSVRPDLIKGLGGNNE HHHCCHHHHHHHHHHHHCHHHHHCCCCCCC >Mature Secondary Structure MHIPDGFLPIWEAGLLWLVSLVCIGLSLKWASKEMNEKTVPLFAAVAAGIFAIQAMNIPI CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC PWGTSGHMGGAALASIIFDSPWAGVLMLALVLIVQGLFFADGGILAMGANVFNMGIISAF CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH VGYYVFKSLKKVNIAVAAFGAGWFALFLGAIVCAIEMAVAGTFPLDKGLQFMGLYHAAIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH FIEGGITAVVIQYISSVRPDLIKGLGGNNE HHHCCHHHHHHHHHHHHCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]