| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is fmdC [H]
Identifier: 150400522
GI number: 150400522
Start: 86655
End: 87932
Strand: Direct
Name: fmdC [H]
Synonym: Maeo_0084
Alternate gene names: 150400522
Gene position: 86655-87932 (Clockwise)
Preceding gene: 150400521
Following gene: 150400523
Centisome position: 5.52
GC content: 36.23
Gene sequence:
>1278_bases ATGGATATAATATTAACTCCAACCAAAAAACCAGACATATCAATTGAGGCAGATGTTATTTCTCCCGATTATTTTGCAGG TAAAACCATAGACGAAATTAAATCATTAGAGGTATGGCAAGGCCCTATTAAATTACCACTTTCAGATTTCTTTGATGTAA AAATTGAAAATAATGAAAAAGATAAAGCAGATGGAAGGGGGGGAGCTCCCAAAGATATCAACGAAATTAATATAATAATT AATGGAGATGTCGATAGAATAAAATATATAGGAACTGAAATGACCGGTGGAACCATTACAATTAATGGAAATACTGGAAT AAGAATTGGTTCATCAATGAAGGGAGGAAGCATAACCATAAATGGAAATGCAGGCTCATGGACTGGAATGGAAATGAAAG GAGGAAGCATAACCATAAATGGAAATGCAGGAGACTATATTGGCTGTGCATATAGGGGTAGCTGGGAAGGAATGACTGGC GGAACAATAACCATAAATGGAAATGCAGGAAAAAATGTTGCAACTGGATTAAAAGGGGGAACCATTACAATTAATGGTGA TGTTGATGAGTTTTGTGGAATAAGACAAAACGGGGGACTTATTGTAATAAATGGAAATGTCACAAGAACCGTAGGAGTTG AAATGACAAAAGGAACATTGGTGGTTTGCGGAAATATTAGGGGTTTTGCCCCTGGTTTCGAGCAAATCGGAGTAGAAAAA GATATAGTTTTAAAAGACGGCACAAAAATCAACGGTAAATTCCTTAAATTCAAAGGAGATATAGCAATTGTGCCAAAACC AAAAGGAATTTTGTATGTTTCCGAAGAAAATAACATTGGGCTTGCAGACCCTTCAAAATATACGACCTTCAAAGAATACC ACTACAAAGGAGGCATGGAAGCTCTTTTAAACACTGGAAGTACTGTGGAGCAAGGGGCCATTATTAAAGGCGGTGAAAAA TACACAAAAGAATATGTTGAAGAATGTGCTGTCTGCCATATTCATCCAGAAGATTACAGAATACTTGGAGCTCCGACATA TGTAAAAATAATAAGTAATGATAAAAAATCCGAAGTAGCTGTAAAGGCAGTTTCAGACGATGGATTGCATAAAGGAACTA TATTTATGCCAAGGTCTATATGGGCTAACGCAATTACTGGTTCCCATACTGATTCGTGTGGTTCTCCCCTGTATAAAGGA AATAGTGTATTTGTTGAACCGATTGAAAAAGGAAATATAATCGATGCAGAACAGATGATAAAAAGTATGTATTGGTGA
Upstream 100 bases:
>100_bases GAATCTTGGTTTAAGAAATACTACTCACTTAGGCTAAAAAACTATCCTACAACGAATAAATATCTTACAAATCCAGAAGC TGTAAATATAGGTGAATAAT
Downstream 100 bases:
>100_bases GATAATGAAAAAAGTATATAGGGATATCAACTGTCCCGTATGTGGTATGGGATGTGATGATATCGTAGTAATCTACGATA AAGAAAACAATACGATAGAG
Product: formylmethanofuran dehydrogenase
Products: NA
Alternate protein names: Molybdenum-containing formylmethanofuran dehydrogenase I subunit C [H]
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MDIILTPTKKPDISIEADVISPDYFAGKTIDEIKSLEVWQGPIKLPLSDFFDVKIENNEKDKADGRGGAPKDINEINIII NGDVDRIKYIGTEMTGGTITINGNTGIRIGSSMKGGSITINGNAGSWTGMEMKGGSITINGNAGDYIGCAYRGSWEGMTG GTITINGNAGKNVATGLKGGTITINGDVDEFCGIRQNGGLIVINGNVTRTVGVEMTKGTLVVCGNIRGFAPGFEQIGVEK DIVLKDGTKINGKFLKFKGDIAIVPKPKGILYVSEENNIGLADPSKYTTFKEYHYKGGMEALLNTGSTVEQGAIIKGGEK YTKEYVEECAVCHIHPEDYRILGAPTYVKIISNDKKSEVAVKAVSDDGLHKGTIFMPRSIWANAITGSHTDSCGSPLYKG NSVFVEPIEKGNIIDAEQMIKSMYW
Sequences:
>Translated_425_residues MDIILTPTKKPDISIEADVISPDYFAGKTIDEIKSLEVWQGPIKLPLSDFFDVKIENNEKDKADGRGGAPKDINEINIII NGDVDRIKYIGTEMTGGTITINGNTGIRIGSSMKGGSITINGNAGSWTGMEMKGGSITINGNAGDYIGCAYRGSWEGMTG GTITINGNAGKNVATGLKGGTITINGDVDEFCGIRQNGGLIVINGNVTRTVGVEMTKGTLVVCGNIRGFAPGFEQIGVEK DIVLKDGTKINGKFLKFKGDIAIVPKPKGILYVSEENNIGLADPSKYTTFKEYHYKGGMEALLNTGSTVEQGAIIKGGEK YTKEYVEECAVCHIHPEDYRILGAPTYVKIISNDKKSEVAVKAVSDDGLHKGTIFMPRSIWANAITGSHTDSCGSPLYKG NSVFVEPIEKGNIIDAEQMIKSMYW >Mature_425_residues MDIILTPTKKPDISIEADVISPDYFAGKTIDEIKSLEVWQGPIKLPLSDFFDVKIENNEKDKADGRGGAPKDINEINIII NGDVDRIKYIGTEMTGGTITINGNTGIRIGSSMKGGSITINGNAGSWTGMEMKGGSITINGNAGDYIGCAYRGSWEGMTG GTITINGNAGKNVATGLKGGTITINGDVDEFCGIRQNGGLIVINGNVTRTVGVEMTKGTLVVCGNIRGFAPGFEQIGVEK DIVLKDGTKINGKFLKFKGDIAIVPKPKGILYVSEENNIGLADPSKYTTFKEYHYKGGMEALLNTGSTVEQGAIIKGGEK YTKEYVEECAVCHIHPEDYRILGAPTYVKIISNDKKSEVAVKAVSDDGLHKGTIFMPRSIWANAITGSHTDSCGSPLYKG NSVFVEPIEKGNIIDAEQMIKSMYW
Specific function: Catalyzes the reversible oxidation of CO(2) and methanofuran (MFR) to N-formylmethanofuran (CHO-MFR). Can only oxidize formylmethanofuran. This enzyme is oxygen-labile [H]
COG id: COG2218
COG function: function code C; Formylmethanofuran dehydrogenase subunit C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the molybdenum dinucleotide binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR012048 - InterPro: IPR017550 - InterPro: IPR002489 - InterPro: IPR006657 [H]
Pfam domain/function: PF01493 GXGXG; PF01568 Molydop_binding [H]
EC number: =1.2.99.5 [H]
Molecular weight: Translated: 45542; Mature: 45542
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIILTPTKKPDISIEADVISPDYFAGKTIDEIKSLEVWQGPIKLPLSDFFDVKIENNEK CCEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHCEEEECCCCCCCCCCEEEEEECCCCC DKADGRGGAPKDINEINIIINGDVDRIKYIGTEMTGGTITINGNTGIRIGSSMKGGSITI CCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCEEEEECCCCEEECCCCCCCEEEE NGNAGSWTGMEMKGGSITINGNAGDYIGCAYRGSWEGMTGGTITINGNAGKNVATGLKGG ECCCCCEECEEECCCEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCCCHHCCCCCC TITINGDVDEFCGIRQNGGLIVINGNVTRTVGVEMTKGTLVVCGNIRGFAPGFEQIGVEK EEEECCCHHHHCCEECCCCEEEECCCEEEEEEEEEECCEEEEEECCCCCCCCHHHHCCCC DIVLKDGTKINGKFLKFKGDIAIVPKPKGILYVSEENNIGLADPSKYTTFKEYHYKGGME EEEEECCCEECCEEEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCEEHHHHCCCCHH ALLNTGSTVEQGAIIKGGEKYTKEYVEECAVCHIHPEDYRILGAPTYVKIISNDKKSEVA HHHCCCCCCCCCCEEECCHHHHHHHHHHCEEEEECCCCEEEECCCEEEEEECCCCCCEEE VKAVSDDGLHKGTIFMPRSIWANAITGSHTDSCGSPLYKGNSVFVEPIEKGNIIDAEQMI EEEECCCCCCCCEEEECHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECHHHHH KSMYW HHHCC >Mature Secondary Structure MDIILTPTKKPDISIEADVISPDYFAGKTIDEIKSLEVWQGPIKLPLSDFFDVKIENNEK CCEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHCEEEECCCCCCCCCCEEEEEECCCCC DKADGRGGAPKDINEINIIINGDVDRIKYIGTEMTGGTITINGNTGIRIGSSMKGGSITI CCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCEEEEECCCCEEECCCCCCCEEEE NGNAGSWTGMEMKGGSITINGNAGDYIGCAYRGSWEGMTGGTITINGNAGKNVATGLKGG ECCCCCEECEEECCCEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCCCHHCCCCCC TITINGDVDEFCGIRQNGGLIVINGNVTRTVGVEMTKGTLVVCGNIRGFAPGFEQIGVEK EEEECCCHHHHCCEECCCCEEEECCCEEEEEEEEEECCEEEEEECCCCCCCCHHHHCCCC DIVLKDGTKINGKFLKFKGDIAIVPKPKGILYVSEENNIGLADPSKYTTFKEYHYKGGME EEEEECCCEECCEEEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCEEHHHHCCCCHH ALLNTGSTVEQGAIIKGGEKYTKEYVEECAVCHIHPEDYRILGAPTYVKIISNDKKSEVA HHHCCCCCCCCCCEEECCHHHHHHHHHHCEEEEECCCCEEEECCCEEEEEECCCCCCEEE VKAVSDDGLHKGTIFMPRSIWANAITGSHTDSCGSPLYKGNSVFVEPIEKGNIIDAEQMI EEEECCCCCCCCEEEECHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECHHHHH KSMYW HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]