| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400476
Identifier: 150400476
GI number: 150400476
Start: 41741
End: 42514
Strand: Reverse
Name: 150400476
Synonym: Maeo_0037
Alternate gene names: NA
Gene position: 42514-41741 (Counterclockwise)
Preceding gene: 150400477
Following gene: 150400474
Centisome position: 2.71
GC content: 26.36
Gene sequence:
>774_bases ATGCACCCAAAAATAAAAGAAATTAGATTAATATCTGCAATGGATAATTTAATAAATTTATATAATGAAGGAACGGTTGA TAAAAATACATATTTAAATTTGAAAAGGTTATTGGACAACAGAATTAATGGAATTGATAATGATTACGAATATGATAACA TAACCAATAATACAAAACAAACCGCAATTGTTGCATTTAGTGGTGGTGTTGATAGCACAGCATCCACAGTAATAGCAAGT AAACTTTTTAATATAATCGGGATTACAGCATATTCTGATATAATTATGCACCCAGACAATAAAAAAAATATATCAAATTT AGCAAAGAAATTAAAAATACGCCATGAATTTTTAGACATTGATTTAAATGAAGTATTAAAGGGTACAGTTAATGGAAAAT ACCACCCATGTGGTAGATGCCATACAACAGTGGAATCTGCTGTTTTAAATTATGCCCTAGAAAATAATATTAAATATATT ATTTATGGAGATATGCTTTCCGTGGGTCAATTATCCATAATTAGAAATAAAAATAATATAGTTAGAATAAATATGCCCTC ATTTTTATGTCTCACAAAAAACGAAAGTAGAGAAATATTAAAGAAAAATAATATAGTTATTTCTCAAAAATATGGTTGTT CTTTGTTAAAAAAATCCCATGCATTTAATCATAATAGAAAATTTACCATTCAAAGAATATTAAGAGAAGTTAGGGCGCAA GTCATAGATAAGGAAGAAGGTTTAAATAATATTTTAGAAGTGTTAGATATGTGA
Upstream 100 bases:
>100_bases AACCCCGTCCGTAAGGGAGGGGTAATTCACTATCAATTCACCATTAATATAATATAAATTAATATAATATAAATATGACC ATAAAATATTAGAGGATATT
Downstream 100 bases:
>100_bases ATTACCCCTCCCTTGTGGAAGGGGCTTCCTGATTAAATTTTATTATTATTTTTACTATTTATTACCAATATAATTATATA ACTATCCAACGGCAATAGCA
Product: ExsB family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MHPKIKEIRLISAMDNLINLYNEGTVDKNTYLNLKRLLDNRINGIDNDYEYDNITNNTKQTAIVAFSGGVDSTASTVIAS KLFNIIGITAYSDIIMHPDNKKNISNLAKKLKIRHEFLDIDLNEVLKGTVNGKYHPCGRCHTTVESAVLNYALENNIKYI IYGDMLSVGQLSIIRNKNNIVRINMPSFLCLTKNESREILKKNNIVISQKYGCSLLKKSHAFNHNRKFTIQRILREVRAQ VIDKEEGLNNILEVLDM
Sequences:
>Translated_257_residues MHPKIKEIRLISAMDNLINLYNEGTVDKNTYLNLKRLLDNRINGIDNDYEYDNITNNTKQTAIVAFSGGVDSTASTVIAS KLFNIIGITAYSDIIMHPDNKKNISNLAKKLKIRHEFLDIDLNEVLKGTVNGKYHPCGRCHTTVESAVLNYALENNIKYI IYGDMLSVGQLSIIRNKNNIVRINMPSFLCLTKNESREILKKNNIVISQKYGCSLLKKSHAFNHNRKFTIQRILREVRAQ VIDKEEGLNNILEVLDM >Mature_257_residues MHPKIKEIRLISAMDNLINLYNEGTVDKNTYLNLKRLLDNRINGIDNDYEYDNITNNTKQTAIVAFSGGVDSTASTVIAS KLFNIIGITAYSDIIMHPDNKKNISNLAKKLKIRHEFLDIDLNEVLKGTVNGKYHPCGRCHTTVESAVLNYALENNIKYI IYGDMLSVGQLSIIRNKNNIVRINMPSFLCLTKNESREILKKNNIVISQKYGCSLLKKSHAFNHNRKFTIQRILREVRAQ VIDKEEGLNNILEVLDM
Specific function: Unknown
COG id: COG1365
COG function: function code R; Predicted ATPase (PP-loop superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012096 - InterPro: IPR018317 - InterPro: IPR014729 [H]
Pfam domain/function: PF06508 ExsB [H]
EC number: NA
Molecular weight: Translated: 29296; Mature: 29296
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPKIKEIRLISAMDNLINLYNEGTVDKNTYLNLKRLLDNRINGIDNDYEYDNITNNTKQ CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC TAIVAFSGGVDSTASTVIASKLFNIIGITAYSDIIMHPDNKKNISNLAKKLKIRHEFLDI EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCC DLNEVLKGTVNGKYHPCGRCHTTVESAVLNYALENNIKYIIYGDMLSVGQLSIIRNKNNI CHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCE VRINMPSFLCLTKNESREILKKNNIVISQKYGCSLLKKSHAFNHNRKFTIQRILREVRAQ EEEECCCEEEEECCCHHHHHHHCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH VIDKEEGLNNILEVLDM HHCHHCCHHHHHHHHCC >Mature Secondary Structure MHPKIKEIRLISAMDNLINLYNEGTVDKNTYLNLKRLLDNRINGIDNDYEYDNITNNTKQ CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC TAIVAFSGGVDSTASTVIASKLFNIIGITAYSDIIMHPDNKKNISNLAKKLKIRHEFLDI EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCC DLNEVLKGTVNGKYHPCGRCHTTVESAVLNYALENNIKYIIYGDMLSVGQLSIIRNKNNI CHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCE VRINMPSFLCLTKNESREILKKNNIVISQKYGCSLLKKSHAFNHNRKFTIQRILREVRAQ EEEECCCEEEEECCCHHHHHHHCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH VIDKEEGLNNILEVLDM HHCHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]