| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400464
Identifier: 150400464
GI number: 150400464
Start: 25552
End: 26850
Strand: Reverse
Name: 150400464
Synonym: Maeo_0025
Alternate gene names: NA
Gene position: 26850-25552 (Counterclockwise)
Preceding gene: 150400470
Following gene: 150400455
Centisome position: 1.71
GC content: 33.1
Gene sequence:
>1299_bases ATGAAAATATTATTTAGGGGCGGAGCAATGGAAGTAGGTAGAAGTTGTATTGAAGTCAGAAGCGATAACAGCATTATATT ATTGGATTGTGGAGTAAAACTATTGGAAGAGGATAATAATAAGAATAATAATCCCGAATATCCTGTATTTAATAAATTAT ATCCTAATGCAGTTTTTATATCTCATGCCCATCTTGACCATACCGGTGCTTTACCTGTGCTTCCCCATATGAAAATCAAT TGTCCAATATATTCAACCCCTATGACACAGGATTTAACTAAGGAGCTCCTAAAAGATTCATTAAAAATAGGATTAATGGA GCATGGTCAAGTTCCATTTAATAAAGGAGACCTTAAAAAAGAAATACGACACCATAAAGATATAGAATATAAAAATATGG AACAATTCAGAGACTTTGAATTTACATATTATGATGCTGGACATATTCCAGGAAGTGCCACAATAGATTTAAATTATGAA AATGGCAAAAGAATAGTTTATACAGGAGATACAAGAGTTTCAAAAACCAGATTAGTAAATGGGGCAGATTTAAGTTATTG TGATAATGATATAAATGCCCTAATAATTGAATCTACCTATGGTGGAGAAAATCACCCTGATAGGGAGCTCCTTGAAAAAG AGTTTCTAAATAAGGTAAAGGAAACAGTGGAAAGAGGGGGAGTTGCTATAATACCAGTTTTTGCAGTAGATAGAAGTCAG GAAATACTATTGATGCTCAATGAAGTAAATTGGAGCGTTCCAATTTATTTTGATGGATTAGGTATAAAAATAACAAAAAT TATGTTAAATCAAAATCCGTCATATCTTGAAAATCATGCAAAACTTAAAAGTGCGTTTCTAAGTACGCATAAAGTTAAAG AAGACCGAAAATATGTAATTGAAGATTTAAGGGAAAATGGCGGAATAATTGTTAGCACGGCTGGAATGCTCAGTGGAGGA CCAGTATTAAATTATATAGATAACTTTTGGAATGACCCACGGAGCTCCCTGATATTGACAGGTTATCAAGTGAAAAATAC GGCGGGACGAATTCTCCTCGATACTGGAAAATTCCCAATAGGAGAGTTATTTATAAAACCTAAATTTGAAGTGGCACAGT ATGAATTTTCGGCACATGCCGACATGGATGAATTAAGAACAATTGTAAAAAAAGCAAATCCTGAAAATCTCATAATACAG CACGGGGAGGAAGAAAGTATAATGTTATTTAAAGAATGGGCAATTGAAAATGGATTTAATACGATTACTCCGCGATTAGG GGATAAATTAAAAATATAA
Upstream 100 bases:
>100_bases ATAAAAATAAATGTATATATAATTAATTAGAATTTACATTAAATTATATGTAATTCTCTCTCTACATTATATATCATATA AATAAAAGGGGTGATAATAT
Downstream 100 bases:
>100_bases TTAGAGATACAATCAAATATAAAAAAATATAAAAAAATATAATATAAACAAAATAATATTATTATTCATCAGATTCCAAA ATAGCATTTTTAATATTGAA
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MKILFRGGAMEVGRSCIEVRSDNSIILLDCGVKLLEEDNNKNNNPEYPVFNKLYPNAVFISHAHLDHTGALPVLPHMKIN CPIYSTPMTQDLTKELLKDSLKIGLMEHGQVPFNKGDLKKEIRHHKDIEYKNMEQFRDFEFTYYDAGHIPGSATIDLNYE NGKRIVYTGDTRVSKTRLVNGADLSYCDNDINALIIESTYGGENHPDRELLEKEFLNKVKETVERGGVAIIPVFAVDRSQ EILLMLNEVNWSVPIYFDGLGIKITKIMLNQNPSYLENHAKLKSAFLSTHKVKEDRKYVIEDLRENGGIIVSTAGMLSGG PVLNYIDNFWNDPRSSLILTGYQVKNTAGRILLDTGKFPIGELFIKPKFEVAQYEFSAHADMDELRTIVKKANPENLIIQ HGEEESIMLFKEWAIENGFNTITPRLGDKLKI
Sequences:
>Translated_432_residues MKILFRGGAMEVGRSCIEVRSDNSIILLDCGVKLLEEDNNKNNNPEYPVFNKLYPNAVFISHAHLDHTGALPVLPHMKIN CPIYSTPMTQDLTKELLKDSLKIGLMEHGQVPFNKGDLKKEIRHHKDIEYKNMEQFRDFEFTYYDAGHIPGSATIDLNYE NGKRIVYTGDTRVSKTRLVNGADLSYCDNDINALIIESTYGGENHPDRELLEKEFLNKVKETVERGGVAIIPVFAVDRSQ EILLMLNEVNWSVPIYFDGLGIKITKIMLNQNPSYLENHAKLKSAFLSTHKVKEDRKYVIEDLRENGGIIVSTAGMLSGG PVLNYIDNFWNDPRSSLILTGYQVKNTAGRILLDTGKFPIGELFIKPKFEVAQYEFSAHADMDELRTIVKKANPENLIIQ HGEEESIMLFKEWAIENGFNTITPRLGDKLKI >Mature_432_residues MKILFRGGAMEVGRSCIEVRSDNSIILLDCGVKLLEEDNNKNNNPEYPVFNKLYPNAVFISHAHLDHTGALPVLPHMKIN CPIYSTPMTQDLTKELLKDSLKIGLMEHGQVPFNKGDLKKEIRHHKDIEYKNMEQFRDFEFTYYDAGHIPGSATIDLNYE NGKRIVYTGDTRVSKTRLVNGADLSYCDNDINALIIESTYGGENHPDRELLEKEFLNKVKETVERGGVAIIPVFAVDRSQ EILLMLNEVNWSVPIYFDGLGIKITKIMLNQNPSYLENHAKLKSAFLSTHKVKEDRKYVIEDLRENGGIIVSTAGMLSGG PVLNYIDNFWNDPRSSLILTGYQVKNTAGRILLDTGKFPIGELFIKPKFEVAQYEFSAHADMDELRTIVKKANPENLIIQ HGEEESIMLFKEWAIENGFNTITPRLGDKLKI
Specific function: Unknown
COG id: COG1236
COG function: function code J; Predicted exonuclease of the beta-lactamase fold involved in RNA processing
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family [H]
Homologues:
Organism=Homo sapiens, GI33300633, Length=434, Percent_Identity=31.1059907834101, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI7706427, Length=433, Percent_Identity=27.4826789838337, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI32564696, Length=437, Percent_Identity=29.7482837528604, Blast_Score=152, Evalue=2e-37, Organism=Caenorhabditis elegans, GI32566029, Length=440, Percent_Identity=27.2727272727273, Blast_Score=149, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6323307, Length=461, Percent_Identity=26.0303687635575, Blast_Score=144, Evalue=3e-35, Organism=Drosophila melanogaster, GI21358523, Length=459, Percent_Identity=29.6296296296296, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI24648013, Length=426, Percent_Identity=27.4647887323944, Blast_Score=155, Evalue=5e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022712 - InterPro: IPR001279 - InterPro: IPR011108 [H]
Pfam domain/function: PF10996 Beta-Casp; PF00753 Lactamase_B; PF07521 RMMBL [H]
EC number: NA
Molecular weight: Translated: 49037; Mature: 49037
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILFRGGAMEVGRSCIEVRSDNSIILLDCGVKLLEEDNNKNNNPEYPVFNKLYPNAVFI CEEEEECCCHHHCHHHHEECCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEEEE SHAHLDHTGALPVLPHMKINCPIYSTPMTQDLTKELLKDSLKIGLMEHGQVPFNKGDLKK EEECCCCCCCCCCCCCCEECCCEECCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCHHHH EIRHHKDIEYKNMEQFRDFEFTYYDAGHIPGSATIDLNYENGKRIVYTGDTRVSKTRLVN HHHHHCCCCCCCHHHHCCCEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCEEHEEEEC GADLSYCDNDINALIIESTYGGENHPDRELLEKEFLNKVKETVERGGVAIIPVFAVDRSQ CCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCC EILLMLNEVNWSVPIYFDGLGIKITKIMLNQNPSYLENHAKLKSAFLSTHKVKEDRKYVI EEEEEEECCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDLRENGGIIVSTAGMLSGGPVLNYIDNFWNDPRSSLILTGYQVKNTAGRILLDTGKFPI HHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCC GELFIKPKFEVAQYEFSAHADMDELRTIVKKANPENLIIQHGEEESIMLFKEWAIENGFN CCEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEHHHHCCCC TITPRLGDKLKI CCCCCCCCCCCC >Mature Secondary Structure MKILFRGGAMEVGRSCIEVRSDNSIILLDCGVKLLEEDNNKNNNPEYPVFNKLYPNAVFI CEEEEECCCHHHCHHHHEECCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEEEE SHAHLDHTGALPVLPHMKINCPIYSTPMTQDLTKELLKDSLKIGLMEHGQVPFNKGDLKK EEECCCCCCCCCCCCCCEECCCEECCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCHHHH EIRHHKDIEYKNMEQFRDFEFTYYDAGHIPGSATIDLNYENGKRIVYTGDTRVSKTRLVN HHHHHCCCCCCCHHHHCCCEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCEEHEEEEC GADLSYCDNDINALIIESTYGGENHPDRELLEKEFLNKVKETVERGGVAIIPVFAVDRSQ CCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCC EILLMLNEVNWSVPIYFDGLGIKITKIMLNQNPSYLENHAKLKSAFLSTHKVKEDRKYVI EEEEEEECCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDLRENGGIIVSTAGMLSGGPVLNYIDNFWNDPRSSLILTGYQVKNTAGRILLDTGKFPI HHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCC GELFIKPKFEVAQYEFSAHADMDELRTIVKKANPENLIIQHGEEESIMLFKEWAIENGFN CCEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEHHHHCCCC TITPRLGDKLKI CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]