| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is 150400450
Identifier: 150400450
GI number: 150400450
Start: 12767
End: 14509
Strand: Direct
Name: 150400450
Synonym: Maeo_0011
Alternate gene names: NA
Gene position: 12767-14509 (Clockwise)
Preceding gene: 150400449
Following gene: 150400451
Centisome position: 0.81
GC content: 26.74
Gene sequence:
>1743_bases ATGCTAATTTCATTTAATTTTGAGGTCCATCAACCTCATAGATTGAATAAATATATTAAAAATGGGATTAATATTGACAA AATTAAAAATACTAACAATAACAACCATAATTTATGGGATAGATATATTGATGTGCCATTAAATAAAGAAGTATTTAATA AAGTTGCAAATAAATGCTATATTCCTACAAATCGAATTATGCTTGATTTAATAGATAAACATGATATTAAAATAGCATAC AGCATAACGGGGGTATTTTTAGAACAGGCAATGGAATTTAATGATGAGGTGCTGGACTTATTTAAAGACCTTGTGAAAAC TGGCAATGTTGAATTAATTGGGGAAACATACCACCATTCATTATCGTCTTTGTTTGAAACTCATGATGAATTTAAAGAAG ACATATTAAGACATAAAAAGCTTATAAAGGACTTATTTAATTATAAAACAGAGGTATTTAGAAATACTGAATTAATATAT CATAATAGCATAGCTAAAACTGTAAAGGACATAGGAGGATTTAAAGGTATATTTACAGAGGGCGCAGATAGATTGCTTGA TTGGAGGTCTCCAAATTATGTATATGATTCACTTTGTGGTTTAAATGTTCTTTTAAGGAATTATCAATTAAGTGATGATG TTGGTTTTAGATTTTCGTGTTGTGGTTGGGAAGATTATCCATTATACGCCGATAAATATGCAAAATGGCTTGCAAATACT CCTGGAGACTGTATAAATATTTATGTGGATTATGAAACATTTGGAGAACATCAATGGAAAGAAACAGGGATTTTTGAATT TTTGAAGGAGCTCCCCAATGAAATTGAAAAATACTCCCATCTTGAATATGCAAAACCTACTGAAATATTGGATAAATGTA GGCCAAAGGGGGAAATTGATGTATTTGAGTTTTCTGCATTATCTTGGGCAGATACTGAACGAGATATTAGTGCATGGCTT GGCAACAGATTACAAAAGACATCATTTGATAAATTAAAATCCATTAGAGAACCTCTGGGAAGATATATTCAAACCAATAA TAAAAATAGTAAAAATAATAACTCCAATACAACAGATACGGCAACACTCGATAACGATTTATATGACGAAATTATGGAAT ATAGAATTTATAAAAATCTTCAAACAAGTGATAACTTTTATTATCAATGTACAAAAGGATTCAATGATATGGATGTCCAT GCTTATTTCAGTCATTTCGAAACTCCTTATGATGCATTTGTGGCTTATATGGATATAGTATATGATTTTAAAACTCACCT AACAATTTCTCAGATTTTGGAAATATATAAAGAAAAATTAAATCGATTAAATAATGAGCTAAATGAATTAAAAGAATTAA ATAAAAAAGAAAACGAAGATACCTCAGAATTAAATAATATCATAAATGATTTAAAAGATAAGATTAAAAACATGGAGCTC CAATTAAACTTAAAAGATGAAAATATTCAAAAGTTAAAAGAGGAAGGTGTAAATTTAGTCAATAAATTAAAACAATACGA AAAAGAAATAATCTCAAAAACTGAGAATGTAAAAAAAGAAATAATGAATTTAAAAAAAGAGCACGAGCAAGAAATTAAAA AAAAAGAAAATAAACTAGGAAATAACTCATATAATATAAGAAATAATGATATACAAAAAGATAACAATAAAAATAATAAA AATAATAAAAATAATAGCAATAATAAGAATAATAAGAATAGTGATTTTATTATAGGCTCTTAA
Upstream 100 bases:
>100_bases TTTCAAAATTACAAATCGAATAAGCAATATAAAAGCCAATATAAAATATAAAATATAAAATATAAAATAATAAATATAAA ATATAATAGCGGGGGATATT
Downstream 100 bases:
>100_bases TCGGGGAAATTATGAACGAAGAAACAAATAATGAATTTAAAAAAAACCTTGAAAAATTTAAAAAAATGGCAAAACGAGGA AAAGAAACTAAGATGGACAA
Product: Alpha-amylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MLISFNFEVHQPHRLNKYIKNGINIDKIKNTNNNNHNLWDRYIDVPLNKEVFNKVANKCYIPTNRIMLDLIDKHDIKIAY SITGVFLEQAMEFNDEVLDLFKDLVKTGNVELIGETYHHSLSSLFETHDEFKEDILRHKKLIKDLFNYKTEVFRNTELIY HNSIAKTVKDIGGFKGIFTEGADRLLDWRSPNYVYDSLCGLNVLLRNYQLSDDVGFRFSCCGWEDYPLYADKYAKWLANT PGDCINIYVDYETFGEHQWKETGIFEFLKELPNEIEKYSHLEYAKPTEILDKCRPKGEIDVFEFSALSWADTERDISAWL GNRLQKTSFDKLKSIREPLGRYIQTNNKNSKNNNSNTTDTATLDNDLYDEIMEYRIYKNLQTSDNFYYQCTKGFNDMDVH AYFSHFETPYDAFVAYMDIVYDFKTHLTISQILEIYKEKLNRLNNELNELKELNKKENEDTSELNNIINDLKDKIKNMEL QLNLKDENIQKLKEEGVNLVNKLKQYEKEIISKTENVKKEIMNLKKEHEQEIKKKENKLGNNSYNIRNNDIQKDNNKNNK NNKNNSNNKNNKNSDFIIGS
Sequences:
>Translated_580_residues MLISFNFEVHQPHRLNKYIKNGINIDKIKNTNNNNHNLWDRYIDVPLNKEVFNKVANKCYIPTNRIMLDLIDKHDIKIAY SITGVFLEQAMEFNDEVLDLFKDLVKTGNVELIGETYHHSLSSLFETHDEFKEDILRHKKLIKDLFNYKTEVFRNTELIY HNSIAKTVKDIGGFKGIFTEGADRLLDWRSPNYVYDSLCGLNVLLRNYQLSDDVGFRFSCCGWEDYPLYADKYAKWLANT PGDCINIYVDYETFGEHQWKETGIFEFLKELPNEIEKYSHLEYAKPTEILDKCRPKGEIDVFEFSALSWADTERDISAWL GNRLQKTSFDKLKSIREPLGRYIQTNNKNSKNNNSNTTDTATLDNDLYDEIMEYRIYKNLQTSDNFYYQCTKGFNDMDVH AYFSHFETPYDAFVAYMDIVYDFKTHLTISQILEIYKEKLNRLNNELNELKELNKKENEDTSELNNIINDLKDKIKNMEL QLNLKDENIQKLKEEGVNLVNKLKQYEKEIISKTENVKKEIMNLKKEHEQEIKKKENKLGNNSYNIRNNDIQKDNNKNNK NNKNNSNNKNNKNSDFIIGS >Mature_580_residues MLISFNFEVHQPHRLNKYIKNGINIDKIKNTNNNNHNLWDRYIDVPLNKEVFNKVANKCYIPTNRIMLDLIDKHDIKIAY SITGVFLEQAMEFNDEVLDLFKDLVKTGNVELIGETYHHSLSSLFETHDEFKEDILRHKKLIKDLFNYKTEVFRNTELIY HNSIAKTVKDIGGFKGIFTEGADRLLDWRSPNYVYDSLCGLNVLLRNYQLSDDVGFRFSCCGWEDYPLYADKYAKWLANT PGDCINIYVDYETFGEHQWKETGIFEFLKELPNEIEKYSHLEYAKPTEILDKCRPKGEIDVFEFSALSWADTERDISAWL GNRLQKTSFDKLKSIREPLGRYIQTNNKNSKNNNSNTTDTATLDNDLYDEIMEYRIYKNLQTSDNFYYQCTKGFNDMDVH AYFSHFETPYDAFVAYMDIVYDFKTHLTISQILEIYKEKLNRLNNELNELKELNKKENEDTSELNNIINDLKDKIKNMEL QLNLKDENIQKLKEEGVNLVNKLKQYEKEIISKTENVKKEIMNLKKEHEQEIKKKENKLGNNSYNIRNNDIQKDNNKNNK NNKNNSNNKNNKNSDFIIGS
Specific function: Unknown
COG id: COG1449
COG function: function code G; Alpha-amylase/alpha-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 57 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011330 - InterPro: IPR004300 [H]
Pfam domain/function: PF03065 Glyco_hydro_57 [H]
EC number: =3.2.1.1 [H]
Molecular weight: Translated: 68504; Mature: 68504
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLISFNFEVHQPHRLNKYIKNGINIDKIKNTNNNNHNLWDRYIDVPLNKEVFNKVANKCY CEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCC IPTNRIMLDLIDKHDIKIAYSITGVFLEQAMEFNDEVLDLFKDLVKTGNVELIGETYHHS CCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEHHHHHHH LSSLFETHDEFKEDILRHKKLIKDLFNYKTEVFRNTELIYHNSIAKTVKDIGGFKGIFTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHCCCCHHHHH GADRLLDWRSPNYVYDSLCGLNVLLRNYQLSDDVGFRFSCCGWEDYPLYADKYAKWLANT CHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCC PGDCINIYVDYETFGEHQWKETGIFEFLKELPNEIEKYSHLEYAKPTEILDKCRPKGEID CCCEEEEEEEHHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCE VFEFSALSWADTERDISAWLGNRLQKTSFDKLKSIREPLGRYIQTNNKNSKNNNSNTTDT EEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ATLDNDLYDEIMEYRIYKNLQTSDNFYYQCTKGFNDMDVHAYFSHFETPYDAFVAYMDIV CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHH YDFKTHLTISQILEIYKEKLNRLNNELNELKELNKKENEDTSELNNIINDLKDKIKNMEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEE QLNLKDENIQKLKEEGVNLVNKLKQYEKEIISKTENVKKEIMNLKKEHEQEIKKKENKLG EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NNSYNIRNNDIQKDNNKNNKNNKNNSNNKNNKNSDFIIGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC >Mature Secondary Structure MLISFNFEVHQPHRLNKYIKNGINIDKIKNTNNNNHNLWDRYIDVPLNKEVFNKVANKCY CEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCC IPTNRIMLDLIDKHDIKIAYSITGVFLEQAMEFNDEVLDLFKDLVKTGNVELIGETYHHS CCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEHHHHHHH LSSLFETHDEFKEDILRHKKLIKDLFNYKTEVFRNTELIYHNSIAKTVKDIGGFKGIFTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHCCCCHHHHH GADRLLDWRSPNYVYDSLCGLNVLLRNYQLSDDVGFRFSCCGWEDYPLYADKYAKWLANT CHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCC PGDCINIYVDYETFGEHQWKETGIFEFLKELPNEIEKYSHLEYAKPTEILDKCRPKGEID CCCEEEEEEEHHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCE VFEFSALSWADTERDISAWLGNRLQKTSFDKLKSIREPLGRYIQTNNKNSKNNNSNTTDT EEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ATLDNDLYDEIMEYRIYKNLQTSDNFYYQCTKGFNDMDVHAYFSHFETPYDAFVAYMDIV CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHH YDFKTHLTISQILEIYKEKLNRLNNELNELKELNKKENEDTSELNNIINDLKDKIKNMEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEE QLNLKDENIQKLKEEGVNLVNKLKQYEKEIISKTENVKKEIMNLKKEHEQEIKKKENKLG EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NNSYNIRNNDIQKDNNKNNKNNKNNSNNKNNKNSDFIIGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]