| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150400318
Identifier: 150400318
GI number: 150400318
Start: 1596250
End: 1597266
Strand: Reverse
Name: 150400318
Synonym: Mevan_1581
Alternate gene names: NA
Gene position: 1597266-1596250 (Counterclockwise)
Preceding gene: 150400319
Following gene: 150400315
Centisome position: 92.86
GC content: 28.02
Gene sequence:
>1017_bases ATGCTTCCAAACAAAAAAGCTATTGATTTAATCAAAATTTACATGGAAAAAGAGTATAGTTTAGAAAATTTTTCAAGCTT AATTGATGAACTTATTAAAAAAGATTTACTCGTAAAAACGGATGATGAAACATTTACTATTCGTTCAGAAGACCCAGATG AACTGATGCACTCTAAAGTTGGCGCACTTGTTGAAAGTATTTCAAAATTTGTAATTCCTTCAAATTTAAAGGAGATAAAA AGCCCAAATATCCTCGATTTATGTAGTGGAATCGGATATAATGCAGTTTCCGCACTTCATAAAAATATTGATTCAAACGT AGATATGGTTGAATTTAGTAAAGAAATGTTATTTTTATCACTTGCACTATATATCCCAATTAAAGAGCATGAACTTATTA AAGAATCAATTTTAAATTTTTTTAAGGGAAAAACGGGGGGAAAAATAAGAATTTTTAATGAAGATGCAAGGGTTACTTTA AAAAGAACATCTCTTAAAACTTATGACGTTGTATTTCATGATGCATTTTCACCATTAAAAGACCCTGTTTTATATACTGT TGACTTTTTAAAGTTAATATATAACATAATGAATGATTCAGGTGTTTTAATATCATATTCGTCCTCAATTCCGTTTAGAA GTGCACTTGTTGAATCAGGCTTTATAATTTCAGAAGGCCCTTCAATCGGAAGGAAAAGAGGGGCAACAATTGCATATAAA AATCCAGATAAAAAACAGATATCTACATTAGTAAGAATTCCCGATTCAGATGAAAGATTAATTGCATTATCAACTGTGGG AATTCCATATTCAGATAAAAATTTGGACTTAACTTCCGAAAAAATCATTGAAAATAGGGAAATAAAGCGTGAAGAATTAA AAAACAAGCTTGGAGATAAATATTATACTACAAAAAAGATAAAGCTTGGAAAAATAGATGAAAAACTTTTAAAAATTCAA GAATATGGAAATAATTCATCAGAAATTATTAAAAAAATGAAAAGTGCATATTTTTAG
Upstream 100 bases:
>100_bases AAAGAATACCGAAGAAATAATTAGAAAATAATTAAATCTTCTTTTTAAATTTTTTAAAAGTATTATTGAATAAAAAATAG TTATTAAAATTGGTGTTTTA
Downstream 100 bases:
>100_bases GATTTTAACATCGTTTAGAATATTCAATTGCAGCATCAATAATATACTGAGTAATGTTTGTATCGGAAACTCTTGAAAGT CCTTCCCATGAAGGGCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MLPNKKAIDLIKIYMEKEYSLENFSSLIDELIKKDLLVKTDDETFTIRSEDPDELMHSKVGALVESISKFVIPSNLKEIK SPNILDLCSGIGYNAVSALHKNIDSNVDMVEFSKEMLFLSLALYIPIKEHELIKESILNFFKGKTGGKIRIFNEDARVTL KRTSLKTYDVVFHDAFSPLKDPVLYTVDFLKLIYNIMNDSGVLISYSSSIPFRSALVESGFIISEGPSIGRKRGATIAYK NPDKKQISTLVRIPDSDERLIALSTVGIPYSDKNLDLTSEKIIENREIKREELKNKLGDKYYTTKKIKLGKIDEKLLKIQ EYGNNSSEIIKKMKSAYF
Sequences:
>Translated_338_residues MLPNKKAIDLIKIYMEKEYSLENFSSLIDELIKKDLLVKTDDETFTIRSEDPDELMHSKVGALVESISKFVIPSNLKEIK SPNILDLCSGIGYNAVSALHKNIDSNVDMVEFSKEMLFLSLALYIPIKEHELIKESILNFFKGKTGGKIRIFNEDARVTL KRTSLKTYDVVFHDAFSPLKDPVLYTVDFLKLIYNIMNDSGVLISYSSSIPFRSALVESGFIISEGPSIGRKRGATIAYK NPDKKQISTLVRIPDSDERLIALSTVGIPYSDKNLDLTSEKIIENREIKREELKNKLGDKYYTTKKIKLGKIDEKLLKIQ EYGNNSSEIIKKMKSAYF >Mature_338_residues MLPNKKAIDLIKIYMEKEYSLENFSSLIDELIKKDLLVKTDDETFTIRSEDPDELMHSKVGALVESISKFVIPSNLKEIK SPNILDLCSGIGYNAVSALHKNIDSNVDMVEFSKEMLFLSLALYIPIKEHELIKESILNFFKGKTGGKIRIFNEDARVTL KRTSLKTYDVVFHDAFSPLKDPVLYTVDFLKLIYNIMNDSGVLISYSSSIPFRSALVESGFIISEGPSIGRKRGATIAYK NPDKKQISTLVRIPDSDERLIALSTVGIPYSDKNLDLTSEKIIENREIKREELKNKLGDKYYTTKKIKLGKIDEKLLKIQ EYGNNSSEIIKKMKSAYF
Specific function: Unknown
COG id: COG4121
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008471 [H]
Pfam domain/function: PF05430 DUF752 [H]
EC number: NA
Molecular weight: Translated: 38430; Mature: 38430
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPNKKAIDLIKIYMEKEYSLENFSSLIDELIKKDLLVKTDDETFTIRSEDPDELMHSKV CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCEEEECCCCHHHHHHHHH GALVESISKFVIPSNLKEIKSPNILDLCSGIGYNAVSALHKNIDSNVDMVEFSKEMLFLS HHHHHHHHHHCCCCCHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH LALYIPIKEHELIKESILNFFKGKTGGKIRIFNEDARVTLKRTSLKTYDVVFHDAFSPLK HHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHCHHC DPVLYTVDFLKLIYNIMNDSGVLISYSSSIPFRSALVESGFIISEGPSIGRKRGATIAYK CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCEEEECCCCCCHHCCCEEEEC NPDKKQISTLVRIPDSDERLIALSTVGIPYSDKNLDLTSEKIIENREIKREELKNKLGDK CCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC YYTTKKIKLGKIDEKLLKIQEYGNNSSEIIKKMKSAYF EEEECEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MLPNKKAIDLIKIYMEKEYSLENFSSLIDELIKKDLLVKTDDETFTIRSEDPDELMHSKV CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCEEEECCCCHHHHHHHHH GALVESISKFVIPSNLKEIKSPNILDLCSGIGYNAVSALHKNIDSNVDMVEFSKEMLFLS HHHHHHHHHHCCCCCHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH LALYIPIKEHELIKESILNFFKGKTGGKIRIFNEDARVTLKRTSLKTYDVVFHDAFSPLK HHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHCHHC DPVLYTVDFLKLIYNIMNDSGVLISYSSSIPFRSALVESGFIISEGPSIGRKRGATIAYK CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCEEEECCCCCCHHCCCEEEEC NPDKKQISTLVRIPDSDERLIALSTVGIPYSDKNLDLTSEKIIENREIKREELKNKLGDK CCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC YYTTKKIKLGKIDEKLLKIQEYGNNSSEIIKKMKSAYF EEEECEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]