| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150400302
Identifier: 150400302
GI number: 150400302
Start: 1576652
End: 1577236
Strand: Reverse
Name: 150400302
Synonym: Mevan_1565
Alternate gene names: NA
Gene position: 1577236-1576652 (Counterclockwise)
Preceding gene: 150400303
Following gene: 150400301
Centisome position: 91.7
GC content: 33.33
Gene sequence:
>585_bases TTGAAAAAAACTCTAGAAAATTTAGCAAAGGCATTTATTGGGGAGAGTCAAGCAAGAAATAGATATACAATATATGCAAA AATTGCACAAAAGGAAGGGTATGAAAAAATATCCGAAGTATTTACAATAACTGCAGAACAAGAAAGGGAACATGCAAAGT GGCTTTTTAGACTAATTACTCAATTAAAAAAGAATGAAAATTATGAAGCTGACTTAATAATTGATGGTGCAGAGGTTCCA ACAGTACTTGGAAACACACTTGAAAATTTAAAATCCGCAGCTAGTGGTGAAAATCACGAATACACTGAAATGTACCCGGA ATTTGCAGATATAGCTGAAAAAGAAGGATTTTTAGATATTTCAAAAAGGTTAAAAGCAATTGCTGCTGCTGAAAAACACC ATGAAGAGAGATATTTAAAATTAATAGAGCAGTTGGAAAAAGGAACAATGTTTAAAAAACATGAAGAAATTTTTTGGGGA TGTAGAAAGTGTGGATATAGGGCAGTTGGTACTGATGCACCTGTAGAATGTCCATCATGCGGGCACCCAACAGCATACTT TGAAAAACAATGTGAAGAATACTAA
Upstream 100 bases:
>100_bases ATTAAAAAGGATAGCACAATTGCCCCTAAAAAGATTTAATTGATAATCAATAAATATGGGTAAAATCATATTTGGTAATG CGTATAAGAGGTGATGGTTT
Downstream 100 bases:
>100_bases TTTATTTATTTATTTATTTATTAACCCGCTTTTTTAATTTTTAAACGTTATTTAACGTTTTAATAGTTTATAAATGGCTT TAAAATGTTAGAAATATATT
Product: rubrerythrin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKKTLENLAKAFIGESQARNRYTIYAKIAQKEGYEKISEVFTITAEQEREHAKWLFRLITQLKKNENYEADLIIDGAEVP TVLGNTLENLKSAASGENHEYTEMYPEFADIAEKEGFLDISKRLKAIAAAEKHHEERYLKLIEQLEKGTMFKKHEEIFWG CRKCGYRAVGTDAPVECPSCGHPTAYFEKQCEEY
Sequences:
>Translated_194_residues MKKTLENLAKAFIGESQARNRYTIYAKIAQKEGYEKISEVFTITAEQEREHAKWLFRLITQLKKNENYEADLIIDGAEVP TVLGNTLENLKSAASGENHEYTEMYPEFADIAEKEGFLDISKRLKAIAAAEKHHEERYLKLIEQLEKGTMFKKHEEIFWG CRKCGYRAVGTDAPVECPSCGHPTAYFEKQCEEY >Mature_194_residues MKKTLENLAKAFIGESQARNRYTIYAKIAQKEGYEKISEVFTITAEQEREHAKWLFRLITQLKKNENYEADLIIDGAEVP TVLGNTLENLKSAASGENHEYTEMYPEFADIAEKEGFLDISKRLKAIAAAEKHHEERYLKLIEQLEKGTMFKKHEEIFWG CRKCGYRAVGTDAPVECPSCGHPTAYFEKQCEEY
Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]
COG id: COG1592
COG function: function code C; Rubrerythrin
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rubredoxin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR004039 - InterPro: IPR003251 [H]
Pfam domain/function: PF02915 Rubrerythrin [H]
EC number: NA
Molecular weight: Translated: 22353; Mature: 22353
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLENLAKAFIGESQARNRYTIYAKIAQKEGYEKISEVFTITAEQEREHAKWLFRLIT CHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QLKKNENYEADLIIDGAEVPTVLGNTLENLKSAASGENHEYTEMYPEFADIAEKEGFLDI HHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHH SKRLKAIAAAEKHHEERYLKLIEQLEKGTMFKKHEEIFWGCRKCGYRAVGTDAPVECPSC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GHPTAYFEKQCEEY CCCHHHHHHHHCCC >Mature Secondary Structure MKKTLENLAKAFIGESQARNRYTIYAKIAQKEGYEKISEVFTITAEQEREHAKWLFRLIT CHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QLKKNENYEADLIIDGAEVPTVLGNTLENLKSAASGENHEYTEMYPEFADIAEKEGFLDI HHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHH SKRLKAIAAAEKHHEERYLKLIEQLEKGTMFKKHEEIFWGCRKCGYRAVGTDAPVECPSC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GHPTAYFEKQCEEY CCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]