| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150400296
Identifier: 150400296
GI number: 150400296
Start: 1569744
End: 1571969
Strand: Reverse
Name: 150400296
Synonym: Mevan_1559
Alternate gene names: NA
Gene position: 1571969-1569744 (Counterclockwise)
Preceding gene: 150400297
Following gene: 150400295
Centisome position: 91.39
GC content: 31.76
Gene sequence:
>2226_bases ATGAATAAGGGTATCATGTTAGTTATCGGCATACTGCTGGTAGCGTCAGGTGCTTTTCTAAGCCTCAATCAAAAGGAAAT GAGTTTAAACTTCGATTTTAATGGAGATTTTGAACTGATTCCAGTAGGCTCAGAAGAAAATTTTAACATGTTTTTAGCAA AGGCTTCAAGCTCAAGTCATTACGGCAGAAGTTACGGAGTTAATGATTTAGCAGTAACCAAATCATCTATGGAAAGTAGA ATATCTTTAGATGGTAGCGTTAGATATTCTGAAACAAATGTTCAAGTACTGGGCGTTGATGAAGCAGATATTGTAAAAAC CAATGGAAAACTTATATTTTATTCAACACAAACCCCAATATGGATAAGTTCCAACTGGCAAACAAATACCTATTTAATCG ATGCGTTACCGGGAGAAACTTCAAAAATCATTGGAAATATTTCAAAAGGGGGAAACCTATACCTTATGGACGATACCCTT TTAATAATCGATTACGACAAGATAACTAGCTATAATATTTCTAACCCTAACTCACCAGAATTAAAGTGGTCAAGAGAGTT AGACGGATCATATGTTGATTCAAGATTAATTGACGGAAATTTATATTTAATAGTTCAAGAATACAGTTTTAATGGGCCAA TTATATGGAACAATATTAGGCTTGACTATAAAGACGTCTATATTCCAAGGATTCCAAGTATAATGCGACCAAATTTTGAA TCAACATATATAATATCTTCAATAAATGCTGAAAATGGAAGCATTAAAGATACTGTTGCACTAGTTGGTTCATATAGTAC TACAGTCTACGTTTCAGGGGAAAACATATACTTTGCATATTCCCTAAACTACGATGAAAATAAATTAATGCTTCGATTTA TCTCAGAAAATGGAAATAGATATTTCCCAAAGGACATTACAAATAAGTTAAATAGAATAGAAAGTAACGAAGACTTTGGG GATGAAGCAAAATACGTCCAAATAACGGAAATACTTGAAAAATACTTAAAGACAATTTCTTCTGAAGAAAGAAATAATCT AATGAATAAAATTGAAGCTGATTATGAGTCATTCTTAAAAGAAAATTTAGAAGACCTTGAAGGTACGGGAATTGCAAAAA TAGAACTTGATACATTTAAAGTAACAAGTGGAAAAGTGCCTGGGACTCTTTTAAACAGCTTTTCAATGGACGAATACAAT GGAAATTTAAGGGTTGCAACAACAATTGGAAACAGCTGGAGATTTAGAGATTTTCAAACAAATAACATATATGTATTAGA CAAAGACATGAAAATTACTGGAAAATTAACTGGTCTTGAAGAAGGGGAACGAATATACAGTGCAAGATTCATGGGGGATA CTGCATATCTTGTAACATTCCGTGAAATAGACCCATTCTTTGTTATTGATTTAAAAGACCCTAAAAATCCGAAAGTCCTA GGGGAACTAAAAATTCCAGGATATTCAACGTACTTACACCCAATTGGAAATAATAAAATAATAGGTATTGGAAAAGACGA ACAAAATAGACTAAAAGTTTCATTATTTGACGTTAAAGATGTTAGTAGTCCAAAAGAAATTTCAAAGTATTCTTTAAACG AGTACTGGTCAGAAGCATTATATAATCATCATGCATTCCTTTGGGATTCTGAAAAAGAGGTACTTGTACTGCCCGCTGGA AACCATGCATTTGTCTTAGAAGTTACTGAAAATGGAATTAAAATGCTAAAAGATGAAGTACATAAGGATTACGGTGTTTT AAGGGCGATATACATAAATGATTACCTTTACACGTTTTCAAATTATGAAATACATGTAATTGACCAAAAAACTTGGAAAA CTGTAAATACGATTAATTTACCAAAATACGATTATCCATACTACCCTAGACCTTATGAACCCATTTATCAAGAGTCAGTA ATAGATAGCGAAGTAGTTGAAAAAAAAGTTAAATTAGGGGAAAATATAACGATAACTCTTGAAGAAAATCCTTCAACAGG ATATTCTTGGAGTTATGAGGTAGAAGATTGGAGTAATATAAATATATTAACGGATACATACGTTCAAAACGATAATAAAG AAATAGTAGGAAGTGGTGGAATCCATACGTGGACTTTTGAAACTCTTGAAAAGGGTATTGTTACAATTAAATTTGACTAT TATCGCCCTTTTGAAGGAATTGACTCATCAATATCTAAAAAAACATATGTAATAAATATAGAATAA
Upstream 100 bases:
>100_bases TTATTATCCATACGTTTTAGATTCACCGAACAATTTAAAAACTATTTTAAGGTACCCTTAACAAACTAATTTTATAGAAA AATTATTTTGGTGATTTTCA
Downstream 100 bases:
>100_bases TTAATTTTTTTTAAATTTTTTCTATAATTTATAAATACTGTTCCCTTTCAAATAAAATATAAAAAAAAGGGGGCGAGTAT CTTGAAATTAAATCTAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 741; Mature: 741
Protein sequence:
>741_residues MNKGIMLVIGILLVASGAFLSLNQKEMSLNFDFNGDFELIPVGSEENFNMFLAKASSSSHYGRSYGVNDLAVTKSSMESR ISLDGSVRYSETNVQVLGVDEADIVKTNGKLIFYSTQTPIWISSNWQTNTYLIDALPGETSKIIGNISKGGNLYLMDDTL LIIDYDKITSYNISNPNSPELKWSRELDGSYVDSRLIDGNLYLIVQEYSFNGPIIWNNIRLDYKDVYIPRIPSIMRPNFE STYIISSINAENGSIKDTVALVGSYSTTVYVSGENIYFAYSLNYDENKLMLRFISENGNRYFPKDITNKLNRIESNEDFG DEAKYVQITEILEKYLKTISSEERNNLMNKIEADYESFLKENLEDLEGTGIAKIELDTFKVTSGKVPGTLLNSFSMDEYN GNLRVATTIGNSWRFRDFQTNNIYVLDKDMKITGKLTGLEEGERIYSARFMGDTAYLVTFREIDPFFVIDLKDPKNPKVL GELKIPGYSTYLHPIGNNKIIGIGKDEQNRLKVSLFDVKDVSSPKEISKYSLNEYWSEALYNHHAFLWDSEKEVLVLPAG NHAFVLEVTENGIKMLKDEVHKDYGVLRAIYINDYLYTFSNYEIHVIDQKTWKTVNTINLPKYDYPYYPRPYEPIYQESV IDSEVVEKKVKLGENITITLEENPSTGYSWSYEVEDWSNINILTDTYVQNDNKEIVGSGGIHTWTFETLEKGIVTIKFDY YRPFEGIDSSISKKTYVINIE
Sequences:
>Translated_741_residues MNKGIMLVIGILLVASGAFLSLNQKEMSLNFDFNGDFELIPVGSEENFNMFLAKASSSSHYGRSYGVNDLAVTKSSMESR ISLDGSVRYSETNVQVLGVDEADIVKTNGKLIFYSTQTPIWISSNWQTNTYLIDALPGETSKIIGNISKGGNLYLMDDTL LIIDYDKITSYNISNPNSPELKWSRELDGSYVDSRLIDGNLYLIVQEYSFNGPIIWNNIRLDYKDVYIPRIPSIMRPNFE STYIISSINAENGSIKDTVALVGSYSTTVYVSGENIYFAYSLNYDENKLMLRFISENGNRYFPKDITNKLNRIESNEDFG DEAKYVQITEILEKYLKTISSEERNNLMNKIEADYESFLKENLEDLEGTGIAKIELDTFKVTSGKVPGTLLNSFSMDEYN GNLRVATTIGNSWRFRDFQTNNIYVLDKDMKITGKLTGLEEGERIYSARFMGDTAYLVTFREIDPFFVIDLKDPKNPKVL GELKIPGYSTYLHPIGNNKIIGIGKDEQNRLKVSLFDVKDVSSPKEISKYSLNEYWSEALYNHHAFLWDSEKEVLVLPAG NHAFVLEVTENGIKMLKDEVHKDYGVLRAIYINDYLYTFSNYEIHVIDQKTWKTVNTINLPKYDYPYYPRPYEPIYQESV IDSEVVEKKVKLGENITITLEENPSTGYSWSYEVEDWSNINILTDTYVQNDNKEIVGSGGIHTWTFETLEKGIVTIKFDY YRPFEGIDSSISKKTYVINIE >Mature_741_residues MNKGIMLVIGILLVASGAFLSLNQKEMSLNFDFNGDFELIPVGSEENFNMFLAKASSSSHYGRSYGVNDLAVTKSSMESR ISLDGSVRYSETNVQVLGVDEADIVKTNGKLIFYSTQTPIWISSNWQTNTYLIDALPGETSKIIGNISKGGNLYLMDDTL LIIDYDKITSYNISNPNSPELKWSRELDGSYVDSRLIDGNLYLIVQEYSFNGPIIWNNIRLDYKDVYIPRIPSIMRPNFE STYIISSINAENGSIKDTVALVGSYSTTVYVSGENIYFAYSLNYDENKLMLRFISENGNRYFPKDITNKLNRIESNEDFG DEAKYVQITEILEKYLKTISSEERNNLMNKIEADYESFLKENLEDLEGTGIAKIELDTFKVTSGKVPGTLLNSFSMDEYN GNLRVATTIGNSWRFRDFQTNNIYVLDKDMKITGKLTGLEEGERIYSARFMGDTAYLVTFREIDPFFVIDLKDPKNPKVL GELKIPGYSTYLHPIGNNKIIGIGKDEQNRLKVSLFDVKDVSSPKEISKYSLNEYWSEALYNHHAFLWDSEKEVLVLPAG NHAFVLEVTENGIKMLKDEVHKDYGVLRAIYINDYLYTFSNYEIHVIDQKTWKTVNTINLPKYDYPYYPRPYEPIYQESV IDSEVVEKKVKLGENITITLEENPSTGYSWSYEVEDWSNINILTDTYVQNDNKEIVGSGGIHTWTFETLEKGIVTIKFDY YRPFEGIDSSISKKTYVINIE
Specific function: Unknown
COG id: COG4880
COG function: function code R; Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR019198 - InterPro: IPR014441 [H]
Pfam domain/function: PF09826 Beta_propel [H]
EC number: NA
Molecular weight: Translated: 84724; Mature: 84724
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKGIMLVIGILLVASGAFLSLNQKEMSLNFDFNGDFELIPVGSEENFNMFLAKASSSSH CCCCHHHHHHHHHHCCCCEEEECCEEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCC YGRSYGVNDLAVTKSSMESRISLDGSVRYSETNVQVLGVDEADIVKTNGKLIFYSTQTPI CCCCCCCCCEEEEHHHHHHEEECCCEEEEECCCEEEEECCCCCEEEECCEEEEEECCCCE WISSNWQTNTYLIDALPGETSKIIGNISKGGNLYLMDDTLLIIDYDKITSYNISNPNSPE EEECCCCCCEEEEECCCCCCHHHEEEECCCCEEEEEECEEEEEEEHHCEEEECCCCCCCC LKWSRELDGSYVDSRLIDGNLYLIVQEYSFNGPIIWNNIRLDYKDVYIPRIPSIMRPNFE EEEECCCCCCCCCCEEECCEEEEEEEEECCCCCEEEEEEEEEEEEEECCCCCHHHCCCCC STYIISSINAENGSIKDTVALVGSYSTTVYVSGENIYFAYSLNYDENKLMLRFISENGNR CEEEEEEECCCCCCCEEEEEEEECCEEEEEEECCEEEEEEEECCCCCEEEEEEEECCCCE YFPKDITNKLNRIESNEDFGDEAKYVQITEILEKYLKTISSEERNNLMNKIEADYESFLK ECCHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ENLEDLEGTGIAKIELDTFKVTSGKVPGTLLNSFSMDEYNGNLRVATTIGNSWRFRDFQT HHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEC NNIYVLDKDMKITGKLTGLEEGERIYSARFMGDTAYLVTFREIDPFFVIDLKDPKNPKVL CEEEEEECCEEEEEEECCCCCCCEEEEEEEECCEEEEEEEECCCCEEEEECCCCCCCCEE GELKIPGYSTYLHPIGNNKIIGIGKDEQNRLKVSLFDVKDVSSPKEISKYSLNEYWSEAL EEEECCCCEEEEEECCCCEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH YNHHAFLWDSEKEVLVLPAGNHAFVLEVTENGIKMLKDEVHKDYGVLRAIYINDYLYTFS HCCEEEEECCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEEEEEEEEEC NYEIHVIDQKTWKTVNTINLPKYDYPYYPRPYEPIYQESVIDSEVVEKKVKLGENITITL CEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCEEEEE EENPSTGYSWSYEVEDWSNINILTDTYVQNDNKEIVGSGGIHTWTFETLEKGIVTIKFDY ECCCCCCCEEEEECCCCCCEEEEEEEEEECCCCEEEECCCEEEEEHHHHHCCEEEEEEEC YRPFEGIDSSISKKTYVINIE CCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MNKGIMLVIGILLVASGAFLSLNQKEMSLNFDFNGDFELIPVGSEENFNMFLAKASSSSH CCCCHHHHHHHHHHCCCCEEEECCEEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCC YGRSYGVNDLAVTKSSMESRISLDGSVRYSETNVQVLGVDEADIVKTNGKLIFYSTQTPI CCCCCCCCCEEEEHHHHHHEEECCCEEEEECCCEEEEECCCCCEEEECCEEEEEECCCCE WISSNWQTNTYLIDALPGETSKIIGNISKGGNLYLMDDTLLIIDYDKITSYNISNPNSPE EEECCCCCCEEEEECCCCCCHHHEEEECCCCEEEEEECEEEEEEEHHCEEEECCCCCCCC LKWSRELDGSYVDSRLIDGNLYLIVQEYSFNGPIIWNNIRLDYKDVYIPRIPSIMRPNFE EEEECCCCCCCCCCEEECCEEEEEEEEECCCCCEEEEEEEEEEEEEECCCCCHHHCCCCC STYIISSINAENGSIKDTVALVGSYSTTVYVSGENIYFAYSLNYDENKLMLRFISENGNR CEEEEEEECCCCCCCEEEEEEEECCEEEEEEECCEEEEEEEECCCCCEEEEEEEECCCCE YFPKDITNKLNRIESNEDFGDEAKYVQITEILEKYLKTISSEERNNLMNKIEADYESFLK ECCHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ENLEDLEGTGIAKIELDTFKVTSGKVPGTLLNSFSMDEYNGNLRVATTIGNSWRFRDFQT HHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEC NNIYVLDKDMKITGKLTGLEEGERIYSARFMGDTAYLVTFREIDPFFVIDLKDPKNPKVL CEEEEEECCEEEEEEECCCCCCCEEEEEEEECCEEEEEEEECCCCEEEEECCCCCCCCEE GELKIPGYSTYLHPIGNNKIIGIGKDEQNRLKVSLFDVKDVSSPKEISKYSLNEYWSEAL EEEECCCCEEEEEECCCCEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH YNHHAFLWDSEKEVLVLPAGNHAFVLEVTENGIKMLKDEVHKDYGVLRAIYINDYLYTFS HCCEEEEECCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEEEEEEEEEC NYEIHVIDQKTWKTVNTINLPKYDYPYYPRPYEPIYQESVIDSEVVEKKVKLGENITITL CEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCEEEEE EENPSTGYSWSYEVEDWSNINILTDTYVQNDNKEIVGSGGIHTWTFETLEKGIVTIKFDY ECCCCCCCEEEEECCCCCCEEEEEEEEEECCCCEEEECCCEEEEEHHHHHCCEEEEEEEC YRPFEGIDSSISKKTYVINIE CCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]