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The map label for this gene is rps3Ae

Identifier: 150400261

GI number: 150400261

Start: 1539287

End: 1539949

Strand: Reverse

Name: rps3Ae

Synonym: Mevan_1522

Alternate gene names: 150400261

Gene position: 1539949-1539287 (Counterclockwise)

Preceding gene: 150400262

Following gene: 150400260

Centisome position: 89.53

GC content: 35.44

Gene sequence:

>663_bases
ATGGCAAGAATGAAAGCAAGATCTGCTAAAGGAAAAAGAGTAGCCAAAGATACCTGGAAATCAAAAGTATGGTACAATAT
CTACACACCACAATCATTTGGTGGCGATGTAATTGGGCAAACTCCTGCAAATGACCCTTCTGCGTTAATGGGCAGAATTT
CAGAAATTAGTTTAAGGGACTTAACAAACGAACATTCAAAGCACATGACCAGAATGTACTTTAAAGTTGATGGCGTAAGC
GGTAACAATGCAATAACCCAGTTTGTAGGTCACGATACTACAAGAGAATACTTAAAATCCCAAATAAGAAGAAGAAGAAG
TAAAATCAACGTTATCATCGATGTAAGAACAAAAGATGGTTTCAAAGTAAGAGTTAAAGCTTTAGTTTTAACTGCTGTAA
GGGCAAGAGACTACCATAAAACAGAAATAAGAGTTAAAATGGAACAAATCATTAAAGAAATGGCAAACGAAACAGCATTT
GCAGAATTCGTACATGCTATGGTAATGGGCGGAGTAGGCTCAAAAATTTACAGCGAATGTAAGAAAATGTTCCCATTAAA
AAGAGTAGAAATTTTCAAATCTGAAGTTTTAGAATTTGGAAAAGCTGTTCTTGAAGTAACTCCTGAAGCTCAAGAAGCTG
TTGAAGGGGAAGAAAAACAATAA

Upstream 100 bases:

>100_bases
GGAACTCGCCCGTAAAGTTAAAAGAATATATGCAGAACCTGTAAAACCACTTAGGGACTATGAAGATTTAACTGAATATA
TGTTATAATGAGGTGTAAAA

Downstream 100 bases:

>100_bases
TTTTTCTTTTATTTCTAATTTATTTTTGAAATATTAAACGTACCAATTGCTTTTCTTTTATTGTTTAATCGGGTGGCTTA
ACATGGAGGATAAATCCAAA

Product: 30S ribosomal protein S3Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MARMKARSAKGKRVAKDTWKSKVWYNIYTPQSFGGDVIGQTPANDPSALMGRISEISLRDLTNEHSKHMTRMYFKVDGVS
GNNAITQFVGHDTTREYLKSQIRRRRSKINVIIDVRTKDGFKVRVKALVLTAVRARDYHKTEIRVKMEQIIKEMANETAF
AEFVHAMVMGGVGSKIYSECKKMFPLKRVEIFKSEVLEFGKAVLEVTPEAQEAVEGEEKQ

Sequences:

>Translated_220_residues
MARMKARSAKGKRVAKDTWKSKVWYNIYTPQSFGGDVIGQTPANDPSALMGRISEISLRDLTNEHSKHMTRMYFKVDGVS
GNNAITQFVGHDTTREYLKSQIRRRRSKINVIIDVRTKDGFKVRVKALVLTAVRARDYHKTEIRVKMEQIIKEMANETAF
AEFVHAMVMGGVGSKIYSECKKMFPLKRVEIFKSEVLEFGKAVLEVTPEAQEAVEGEEKQ
>Mature_219_residues
ARMKARSAKGKRVAKDTWKSKVWYNIYTPQSFGGDVIGQTPANDPSALMGRISEISLRDLTNEHSKHMTRMYFKVDGVSG
NNAITQFVGHDTTREYLKSQIRRRRSKINVIIDVRTKDGFKVRVKALVLTAVRARDYHKTEIRVKMEQIIKEMANETAFA
EFVHAMVMGGVGSKIYSECKKMFPLKRVEIFKSEVLEFGKAVLEVTPEAQEAVEGEEKQ

Specific function: Unknown

COG id: COG1890

COG function: function code J; Ribosomal protein S3AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S3Ae family

Homologues:

Organism=Homo sapiens, GI4506723, Length=206, Percent_Identity=27.1844660194175, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17553700, Length=206, Percent_Identity=27.6699029126214, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6323474, Length=210, Percent_Identity=25.7142857142857, Blast_Score=83, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6323577, Length=198, Percent_Identity=25.2525252525253, Blast_Score=82, Evalue=9e-17,
Organism=Drosophila melanogaster, GI17864162, Length=200, Percent_Identity=26, Blast_Score=77, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24638499, Length=159, Percent_Identity=25.7861635220126, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS3A_METVS (A6USE4)

Other databases:

- EMBL:   CP000742
- RefSeq:   YP_001324028.1
- STRING:   A6USE4
- GeneID:   5324467
- GenomeReviews:   CP000742_GR
- KEGG:   mvn:Mevan_1522
- eggNOG:   arNOG07959
- HOGENOM:   HBG402643
- OMA:   GHDTTRE
- ProtClustDB:   PRK04057
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00359
- InterPro:   IPR001593
- InterPro:   IPR018281
- PANTHER:   PTHR11830

Pfam domain/function: PF01015 Ribosomal_S3Ae

EC number: NA

Molecular weight: Translated: 25077; Mature: 24946

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS01191 RIBOSOMAL_S3AE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARMKARSAKGKRVAKDTWKSKVWYNIYTPQSFGGDVIGQTPANDPSALMGRISEISLRD
CCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LTNEHSKHMTRMYFKVDGVSGNNAITQFVGHDTTREYLKSQIRRRRSKINVIIDVRTKDG
HHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEEECCCC
FKVRVKALVLTAVRARDYHKTEIRVKMEQIIKEMANETAFAEFVHAMVMGGVGSKIYSEC
CEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KKMFPLKRVEIFKSEVLEFGKAVLEVTPEAQEAVEGEEKQ
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
>Mature Secondary Structure 
ARMKARSAKGKRVAKDTWKSKVWYNIYTPQSFGGDVIGQTPANDPSALMGRISEISLRD
CCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LTNEHSKHMTRMYFKVDGVSGNNAITQFVGHDTTREYLKSQIRRRRSKINVIIDVRTKDG
HHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEEECCCC
FKVRVKALVLTAVRARDYHKTEIRVKMEQIIKEMANETAFAEFVHAMVMGGVGSKIYSEC
CEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KKMFPLKRVEIFKSEVLEFGKAVLEVTPEAQEAVEGEEKQ
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA