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The map label for this gene is 150400106

Identifier: 150400106

GI number: 150400106

Start: 1391547

End: 1392725

Strand: Reverse

Name: 150400106

Synonym: Mevan_1364

Alternate gene names: NA

Gene position: 1392725-1391547 (Counterclockwise)

Preceding gene: 150400107

Following gene: 150400104

Centisome position: 80.97

GC content: 27.14

Gene sequence:

>1179_bases
ATGAATGGACTTTTTTCAAAAACTAATAATAAAGAATTTAAAGAAATAGTTCAAAAAATTTCAAAAAGGCTGAATTTAAA
TCCAAATGACCTTGAAAAGGGATTTGAACGTAAAATAATTACAAAATACGAATACAATGACAAAAAATACCTCTGTTTTA
AAAAGAAGTTAAGGCATATTGAAAGGGGCACTATTGTTTTTTTAAACGATAATTTTGACTATTTTTGCGGTTATCCTAAA
ATAAAAAGAGCAATGATGCTTAAAGCGTCTTTAGACAAATATTTTGATAAAAAAATTGCAATTGAAGAAAAATTAGATGG
ATATAATATAAGAATTATAAAATTTGAAGATGAAATACTTGCAGTAACTCGTGGTGGGAAAATATGCCCGTTTACAACTA
AAAAAGTTAAAAAATACCTTAAAACCACTTTTTTAGATGATTATCCCAATTTAATGCTTTGTGGAGAAATGATAGGACTA
AATAACCCTTATGTAAACCAATATTACATTGAAGCAGAAAAAGATTATGAAAATTTAGGATTTTATATTTTCGATATTCG
AGAACGTGAAACAAATATACCTTATTCAATATCTAAAAAAGAAGAGCTATTTAAAAAATATGAAATTCCACACGTAAAAC
CAATAATAATCGATAAAAAAGATATTTCTAAATTATGGGAAATATTAAACACACTAAATGAAAATAAAAAAGAAGGCGTA
ATTTTAAAAGACCCTGAAATGCTAATGGAACCTTTAAAATATACCACTCAACACACGCAATGTAATGACCTTTCAATAGC
ATTTAAATATACTTATGATATTGGAATCGATTTCATGTTTAGTAGAATTGTTAGGGAAGGATACCAATCCTTTGAAATGT
CCGAAAGTAAAGAAGAAGAATTAAATAGGGCAGAAAAACTTGGAAAATCGATTTTTCTTCCAATGATTCAAACGATAAAG
GATGTTTCAGAAGGAATCACTTCAAAAGAATGTTTTGAACTATTTTTTGAATCCGAGCCGGATTTTTTAGAATTTATGAA
TTATTTAAAAAAGATGCATGTACCAATTATTATAGAATCCAAAGAAATTATGGGTAAAATCATTAAAGTTCGTATTTGTA
GAATTTATAATGCCACAACCGACAAGATAAAAAGCCACCTTGAAGGAAACCTCTGGTAG

Upstream 100 bases:

>100_bases
AGGCGCAAAGTGAAAATTTTTATTGTAAGAGATCAAACCCAAACAATATGCTTGTTTGCAGTAAACTTTCAAAGCGTATA
AAAAAACTCATGTGATTTTT

Downstream 100 bases:

>100_bases
GCGAAATATCATTAAAATATAAATAAATATTGAATATTTTTAAATAGTAATTTGGTATTTTTTAAAATTATTTTTAAAAA
TCTAAAGAATATTACCTGAT

Product: ATP dependent DNA ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MNGLFSKTNNKEFKEIVQKISKRLNLNPNDLEKGFERKIITKYEYNDKKYLCFKKKLRHIERGTIVFLNDNFDYFCGYPK
IKRAMMLKASLDKYFDKKIAIEEKLDGYNIRIIKFEDEILAVTRGGKICPFTTKKVKKYLKTTFLDDYPNLMLCGEMIGL
NNPYVNQYYIEAEKDYENLGFYIFDIRERETNIPYSISKKEELFKKYEIPHVKPIIIDKKDISKLWEILNTLNENKKEGV
ILKDPEMLMEPLKYTTQHTQCNDLSIAFKYTYDIGIDFMFSRIVREGYQSFEMSESKEEELNRAEKLGKSIFLPMIQTIK
DVSEGITSKECFELFFESEPDFLEFMNYLKKMHVPIIIESKEIMGKIIKVRICRIYNATTDKIKSHLEGNLW

Sequences:

>Translated_392_residues
MNGLFSKTNNKEFKEIVQKISKRLNLNPNDLEKGFERKIITKYEYNDKKYLCFKKKLRHIERGTIVFLNDNFDYFCGYPK
IKRAMMLKASLDKYFDKKIAIEEKLDGYNIRIIKFEDEILAVTRGGKICPFTTKKVKKYLKTTFLDDYPNLMLCGEMIGL
NNPYVNQYYIEAEKDYENLGFYIFDIRERETNIPYSISKKEELFKKYEIPHVKPIIIDKKDISKLWEILNTLNENKKEGV
ILKDPEMLMEPLKYTTQHTQCNDLSIAFKYTYDIGIDFMFSRIVREGYQSFEMSESKEEELNRAEKLGKSIFLPMIQTIK
DVSEGITSKECFELFFESEPDFLEFMNYLKKMHVPIIIESKEIMGKIIKVRICRIYNATTDKIKSHLEGNLW
>Mature_392_residues
MNGLFSKTNNKEFKEIVQKISKRLNLNPNDLEKGFERKIITKYEYNDKKYLCFKKKLRHIERGTIVFLNDNFDYFCGYPK
IKRAMMLKASLDKYFDKKIAIEEKLDGYNIRIIKFEDEILAVTRGGKICPFTTKKVKKYLKTTFLDDYPNLMLCGEMIGL
NNPYVNQYYIEAEKDYENLGFYIFDIRERETNIPYSISKKEELFKKYEIPHVKPIIIDKKDISKLWEILNTLNENKKEGV
ILKDPEMLMEPLKYTTQHTQCNDLSIAFKYTYDIGIDFMFSRIVREGYQSFEMSESKEEELNRAEKLGKSIFLPMIQTIK
DVSEGITSKECFELFFESEPDFLEFMNYLKKMHVPIIIESKEIMGKIIKVRICRIYNATTDKIKSHLEGNLW

Specific function: Unknown

COG id: COG1423

COG function: function code L; ATP-dependent DNA ligase, homolog of eukaryotic ligase III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012310
- InterPro:   IPR001072 [H]

Pfam domain/function: PF01068 DNA_ligase_A_M [H]

EC number: NA

Molecular weight: Translated: 46600; Mature: 46600

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGLFSKTNNKEFKEIVQKISKRLNLNPNDLEKGFERKIITKYEYNDKKYLCFKKKLRHI
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCEEEEEECCCCEEHHHHHHHHHH
ERGTIVFLNDNFDYFCGYPKIKRAMMLKASLDKYFDKKIAIEEKLDGYNIRIIKFEDEIL
CCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEE
AVTRGGKICPFTTKKVKKYLKTTFLDDYPNLMLCGEMIGLNNPYVNQYYIEAEKDYENLG
EEECCCEECCCCHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCCCEEEEEECCCCCCCC
FYIFDIRERETNIPYSISKKEELFKKYEIPHVKPIIIDKKDISKLWEILNTLNENKKEGV
EEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCE
ILKDPEMLMEPLKYTTQHTQCNDLSIAFKYTYDIGIDFMFSRIVREGYQSFEMSESKEEE
EEECHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHH
LNRAEKLGKSIFLPMIQTIKDVSEGITSKECFELFFESEPDFLEFMNYLKKMHVPIIIES
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEC
KEIMGKIIKVRICRIYNATTDKIKSHLEGNLW
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MNGLFSKTNNKEFKEIVQKISKRLNLNPNDLEKGFERKIITKYEYNDKKYLCFKKKLRHI
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCEEEEEECCCCEEHHHHHHHHHH
ERGTIVFLNDNFDYFCGYPKIKRAMMLKASLDKYFDKKIAIEEKLDGYNIRIIKFEDEIL
CCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEE
AVTRGGKICPFTTKKVKKYLKTTFLDDYPNLMLCGEMIGLNNPYVNQYYIEAEKDYENLG
EEECCCEECCCCHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCCCEEEEEECCCCCCCC
FYIFDIRERETNIPYSISKKEELFKKYEIPHVKPIIIDKKDISKLWEILNTLNENKKEGV
EEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCE
ILKDPEMLMEPLKYTTQHTQCNDLSIAFKYTYDIGIDFMFSRIVREGYQSFEMSESKEEE
EEECHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHH
LNRAEKLGKSIFLPMIQTIKDVSEGITSKECFELFFESEPDFLEFMNYLKKMHVPIIIES
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEC
KEIMGKIIKVRICRIYNATTDKIKSHLEGNLW
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]