| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is pstS1 [H]
Identifier: 150400097
GI number: 150400097
Start: 1382322
End: 1383143
Strand: Reverse
Name: pstS1 [H]
Synonym: Mevan_1355
Alternate gene names: 150400097
Gene position: 1383143-1382322 (Counterclockwise)
Preceding gene: 150400098
Following gene: 150400096
Centisome position: 80.41
GC content: 31.51
Gene sequence:
>822_bases TTGAAATTCTATAATTTAATCATATCACTACTCATAATTTCAACATTATGTTTAAGTGGTTGTATATCTACTGAAAGTTC TGGAGAAACTGTTTCAATTAAAACTGCTGGTGGAACTGCATTAATTCCAATAATGAAAGATATTTCAAAAGAATACATGC ATGAAAATAGAAACGTGCAGGTTGAAGTTACAGGTGGAGGTTCTGGTTTTGGAATAAAAGAAACTGGTGAAGGGCGCCTA ACAATTGGAATGGCCGGAAGAGATTTAAAATCTGAGGAAAAAGAAAAATATCCAAATATGGTGGTTTATAAAATAGGTTT AGATGGGATTGCAATAATAACCCATAAAGAAAATCCCGTATCTGACTTAACGACAAAAGAACTTCAAAAAATATATTCTG GGGAAATTACAAATTGGAACGAAATTGGGGGAGGTAATAACCCGATAAATATCTATACTAGGGAAGAAGAAAGTGGAACT CATGAAACTTTCTTAAATGAAGGGCTTTTAAAAGGAAATATCTCTCCAAGGTCACTAATGGTTTCATCAAATGGCGAAAT GAAGTCAAAAATTTCGTTGGATAAAAATGGTATAGGCTATATTTCAATAGGTTATGTTGACGATTCCGTTAAAACACTTA TGTTTAACGGAGTAGAGCCTACTCAGGAAAACGTAAAAGAAGGAATTTATAAAATATATAGGCCATTGAATATTCTTACA AATGGAAAACCTGAAAACAGTGTTCAAAACTTTATTGAATATATTTTAGGGCCAAATGGTCAAAAAATCATTGAAAATAA TGGTTTTTTACCTGTAAATTAA
Upstream 100 bases:
>100_bases TGAAAGCGATAAAGAACAGATAAAAACAAGGCTTGAAGCATTTTTAGAAATGATTTAAATACATAAACTCAATTTATTTT TTAGTTTTTAAGGTGGTAAT
Downstream 100 bases:
>100_bases ATTAAATTAAATTAAATATTAGAAATATCTTTTTTTAATATCTCAAAGAGTTTTTGTATATCTTATTTATAATTTAAAAT CCAAACTTATTTTATAGATT
Product: phosphate binding protein
Products: NA
Alternate protein names: PBP 1 [H]
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MKFYNLIISLLIISTLCLSGCISTESSGETVSIKTAGGTALIPIMKDISKEYMHENRNVQVEVTGGGSGFGIKETGEGRL TIGMAGRDLKSEEKEKYPNMVVYKIGLDGIAIITHKENPVSDLTTKELQKIYSGEITNWNEIGGGNNPINIYTREEESGT HETFLNEGLLKGNISPRSLMVSSNGEMKSKISLDKNGIGYISIGYVDDSVKTLMFNGVEPTQENVKEGIYKIYRPLNILT NGKPENSVQNFIEYILGPNGQKIIENNGFLPVN
Sequences:
>Translated_273_residues MKFYNLIISLLIISTLCLSGCISTESSGETVSIKTAGGTALIPIMKDISKEYMHENRNVQVEVTGGGSGFGIKETGEGRL TIGMAGRDLKSEEKEKYPNMVVYKIGLDGIAIITHKENPVSDLTTKELQKIYSGEITNWNEIGGGNNPINIYTREEESGT HETFLNEGLLKGNISPRSLMVSSNGEMKSKISLDKNGIGYISIGYVDDSVKTLMFNGVEPTQENVKEGIYKIYRPLNILT NGKPENSVQNFIEYILGPNGQKIIENNGFLPVN >Mature_273_residues MKFYNLIISLLIISTLCLSGCISTESSGETVSIKTAGGTALIPIMKDISKEYMHENRNVQVEVTGGGSGFGIKETGEGRL TIGMAGRDLKSEEKEKYPNMVVYKIGLDGIAIITHKENPVSDLTTKELQKIYSGEITNWNEIGGGNNPINIYTREEESGT HETFLNEGLLKGNISPRSLMVSSNGEMKSKISLDKNGIGYISIGYVDDSVKTLMFNGVEPTQENVKEGIYKIYRPLNILT NGKPENSVQNFIEYILGPNGQKIIENNGFLPVN
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29923; Mature: 29923
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFYNLIISLLIISTLCLSGCISTESSGETVSIKTAGGTALIPIMKDISKEYMHENRNVQ CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEHHHHHHHHHHHHHCCCCEE VEVTGGGSGFGIKETGEGRLTIGMAGRDLKSEEKEKYPNMVVYKIGLDGIAIITHKENPV EEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEEECCCEEEEEEECCCCC SDLTTKELQKIYSGEITNWNEIGGGNNPINIYTREEESGTHETFLNEGLLKGNISPRSLM CHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCEECCCCCCEEE VSSNGEMKSKISLDKNGIGYISIGYVDDSVKTLMFNGVEPTQENVKEGIYKIYRPLNILT EECCCCCEEEEEECCCCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHEEE NGKPENSVQNFIEYILGPNGQKIIENNGFLPVN CCCCCHHHHHHHHHHHCCCCCEEEECCCEEECC >Mature Secondary Structure MKFYNLIISLLIISTLCLSGCISTESSGETVSIKTAGGTALIPIMKDISKEYMHENRNVQ CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEHHHHHHHHHHHHHCCCCEE VEVTGGGSGFGIKETGEGRLTIGMAGRDLKSEEKEKYPNMVVYKIGLDGIAIITHKENPV EEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEEECCCEEEEEEECCCCC SDLTTKELQKIYSGEITNWNEIGGGNNPINIYTREEESGTHETFLNEGLLKGNISPRSLM CHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCEECCCCCCEEE VSSNGEMKSKISLDKNGIGYISIGYVDDSVKTLMFNGVEPTQENVKEGIYKIYRPLNILT EECCCCCEEEEEECCCCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHEEE NGKPENSVQNFIEYILGPNGQKIIENNGFLPVN CCCCCHHHHHHHHHHHCCCCCEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]