| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150400055
Identifier: 150400055
GI number: 150400055
Start: 1339711
End: 1339848
Strand: Reverse
Name: 150400055
Synonym: Mevan_1313
Alternate gene names: NA
Gene position: 1339848-1339711 (Counterclockwise)
Preceding gene: 150400056
Following gene: 150400052
Centisome position: 77.9
GC content: 35.51
Gene sequence:
>138_bases ATGGCAATATGGAAATGTACGATTTGTGGTTATGAGTATAATGAAGAAAAAGAGGGTAAAAAATTTTCTGAACTCCCTGA CGACTGGAAATGTCCACTTTGTGGCGCTAAAAAGGACGCATTTGTCCAAAAAAAATAA
Upstream 100 bases:
>100_bases TTAAACTTGTCGATATTTAATGACATAGTAAATATATAAGGTATAAAATACAATATTTCTTTGAATTTTAAATTACATTT AATTAAATGGAGGGATTTTT
Downstream 100 bases:
>100_bases TTTAATTTTTTTAATATAAAATCAGTCGTCAAATTCGATTATTGCATTTTTAATATTGAATTCTTTTCCACCTTTAATTC TAACATTCATACTTCCGCAT
Product: rubredoxin-type Fe(Cys)4 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 44
Protein sequence:
>45_residues MAIWKCTICGYEYNEEKEGKKFSELPDDWKCPLCGAKKDAFVQKK
Sequences:
>Translated_45_residues MAIWKCTICGYEYNEEKEGKKFSELPDDWKCPLCGAKKDAFVQKK >Mature_44_residues AIWKCTICGYEYNEEKEGKKFSELPDDWKCPLCGAKKDAFVQKK
Specific function: Unknown
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5260; Mature: 5129
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: PS00202 RUBREDOXIN ; PS50903 RUBREDOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 11.1 %Cys+Met (Translated Protein) 9.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIWKCTICGYEYNEEKEGKKFSELPDDWKCPLCGAKKDAFVQKK CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure AIWKCTICGYEYNEEKEGKKFSELPDDWKCPLCGAKKDAFVQKK CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA