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The map label for this gene is ugpC [C]

Identifier: 150400026

GI number: 150400026

Start: 1309013

End: 1309801

Strand: Reverse

Name: ugpC [C]

Synonym: Mevan_1284

Alternate gene names: 150400026

Gene position: 1309801-1309013 (Counterclockwise)

Preceding gene: 150400027

Following gene: 150400025

Centisome position: 76.15

GC content: 34.09

Gene sequence:

>789_bases
ATGGATATCAAAGAAATAAAAATAATTGGCGGAGTTAATAAGTGTGGAGAATCAGAAAACGTTAAAGAACTTATTGTTAA
GCGAGGAGAGATTTTTGGGGTAGTCGGGCCAACTGGAAGTGGAAAATCTAATTTAATAAGTGATATCGAACAGCTTTCAC
AAGGCGATACTCCTTCAAAAAGAAAAATATTGATAAATGGCGAAATTCCTGAAACTGAAATGAGGAGAAATCCTAGAAAA
AGAAGAATTGCACAACTTTCACAAAACATGAACTTTTTAGCAGACATGACTGTTGAAGAATTCCTTATAATGCATGCAAA
AAGTAGAGGTATTACTTCTGAAGGCATTGTTGAAAAAGTAATTGATTTAGCAAACAATCTTACCGGTGAACCGATTAAAA
AAGACTACAACTTAACAATTCTAAGCGGGGGGCAGTCTAGAAGTCTTATGGTTGCAGATGTAGCAGTAATTAGTGATTCA
CCGATTGTATTAATTGATGAAATTGAAAATGCAGGAATTAAAAAGCATGAAGCACTTGAACTTCTTTCAGGATATGGTAA
AATCGTGATGGTAATTACCCATGACCCAGTTCTTGCTTTGATGACTACAAGACGAGTAGTTATGAAAAACGGTGGAATGA
TGGAAATTATTGAAACTACGGATGAAGAAAAGGAAGTTTCAAAAAAATTAAGTAATATCGACAGTTGGATGCTTTCAATG
AGGGAAAAAGTAAGGCACGGCCAAAAACTTAGTTTAAATGATATTAAAGCTCAGAAAGTACTTGAATAA

Upstream 100 bases:

>100_bases
AGGAAATATATCTTTTGAGGAGGTTATTTCTCTTGAAACGCTTAGAAAAGGATTAAGAGGAGATACTTTTTTAAAAAGTT
AATTTAAAGAGCGTGGTATT

Downstream 100 bases:

>100_bases
TATTTACGGATGTGAAATAATGAAGATGGTAATTGTTGCGGGAACCCCTGGAGCTGGAAAAACTTCAGTAATGATCCATA
CTATAAAACAGCTTATAAAT

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MDIKEIKIIGGVNKCGESENVKELIVKRGEIFGVVGPTGSGKSNLISDIEQLSQGDTPSKRKILINGEIPETEMRRNPRK
RRIAQLSQNMNFLADMTVEEFLIMHAKSRGITSEGIVEKVIDLANNLTGEPIKKDYNLTILSGGQSRSLMVADVAVISDS
PIVLIDEIENAGIKKHEALELLSGYGKIVMVITHDPVLALMTTRRVVMKNGGMMEIIETTDEEKEVSKKLSNIDSWMLSM
REKVRHGQKLSLNDIKAQKVLE

Sequences:

>Translated_262_residues
MDIKEIKIIGGVNKCGESENVKELIVKRGEIFGVVGPTGSGKSNLISDIEQLSQGDTPSKRKILINGEIPETEMRRNPRK
RRIAQLSQNMNFLADMTVEEFLIMHAKSRGITSEGIVEKVIDLANNLTGEPIKKDYNLTILSGGQSRSLMVADVAVISDS
PIVLIDEIENAGIKKHEALELLSGYGKIVMVITHDPVLALMTTRRVVMKNGGMMEIIETTDEEKEVSKKLSNIDSWMLSM
REKVRHGQKLSLNDIKAQKVLE
>Mature_262_residues
MDIKEIKIIGGVNKCGESENVKELIVKRGEIFGVVGPTGSGKSNLISDIEQLSQGDTPSKRKILINGEIPETEMRRNPRK
RRIAQLSQNMNFLADMTVEEFLIMHAKSRGITSEGIVEKVIDLANNLTGEPIKKDYNLTILSGGQSRSLMVADVAVISDS
PIVLIDEIENAGIKKHEALELLSGYGKIVMVITHDPVLALMTTRRVVMKNGGMMEIIETTDEEKEVSKKLSNIDSWMLSM
REKVRHGQKLSLNDIKAQKVLE

Specific function: Part Of The Binding-Protein-Dependent Transport System For Sn-Glycerol-3-Phosphate. Probably Responsible For Energy Coupling To The Transport System. [C]

COG id: COG1136

COG function: function code V; ABC-type antimicrobial peptide transport system, ATPase component

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI87082267, Length=226, Percent_Identity=32.7433628318584, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 29065; Mature: 29065

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKEIKIIGGVNKCGESENVKELIVKRGEIFGVVGPTGSGKSNLISDIEQLSQGDTPSK
CCCCEEEEECCCHHCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCC
RKILINGEIPETEMRRNPRKRRIAQLSQNMNFLADMTVEEFLIMHAKSRGITSEGIVEKV
CEEEEECCCCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
IDLANNLTGEPIKKDYNLTILSGGQSRSLMVADVAVISDSPIVLIDEIENAGIKKHEALE
HHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCCCCHHHHHH
LLSGYGKIVMVITHDPVLALMTTRRVVMKNGGMMEIIETTDEEKEVSKKLSNIDSWMLSM
HHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
REKVRHGQKLSLNDIKAQKVLE
HHHHHCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MDIKEIKIIGGVNKCGESENVKELIVKRGEIFGVVGPTGSGKSNLISDIEQLSQGDTPSK
CCCCEEEEECCCHHCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCC
RKILINGEIPETEMRRNPRKRRIAQLSQNMNFLADMTVEEFLIMHAKSRGITSEGIVEKV
CEEEEECCCCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
IDLANNLTGEPIKKDYNLTILSGGQSRSLMVADVAVISDSPIVLIDEIENAGIKKHEALE
HHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCCCCHHHHHH
LLSGYGKIVMVITHDPVLALMTTRRVVMKNGGMMEIIETTDEEKEVSKKLSNIDSWMLSM
HHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
REKVRHGQKLSLNDIKAQKVLE
HHHHHCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]