| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
Click here to switch to the map view.
The map label for this gene is 150399921
Identifier: 150399921
GI number: 150399921
Start: 1191167
End: 1192543
Strand: Reverse
Name: 150399921
Synonym: Mevan_1178
Alternate gene names: NA
Gene position: 1192543-1191167 (Counterclockwise)
Preceding gene: 150399923
Following gene: 150399916
Centisome position: 69.33
GC content: 31.52
Gene sequence:
>1377_bases ATGCCAAAATTAAAAATAATACGAGATCCAATCCATAAAGACATTAAACTTAACGAAGAAGAGATTTCAATAGTGGATAC TCCAGAAGTCCAAAGGCTTAGAAATATCAAACAAACGGGACTTACTTGCTTAGTTTACCCAAGTGCTAATCATTCACGAT TTGAACATTCTATTGGAACAATGCACGTTGCAGGCGAAATTGCGAAAAATTTAGAAAATATAGATACTGAATTAACAAAA ATTGTTGCATTGCTCCATGATATTGGGCATTCTCCTTTTTCACATACCTTAGAAGTTGAAGGGTACTCTCATGAAGAATT TACACGTGAAAAAATAAAAAAAATGGATTTTACAAATTATTCCCCTAAGGAAATTTTAGAGGTTTATTCTTCAAAAGGTA TTGAGGGTTCTTTAATTCACGGTGACGTTGATGCTGATAGGATGGACTATCTTGTGAGAGATAGCCATCATACGGGCGTT GCATACGGAACAATCGACATTCCAAGACTTATAAGGAGTATTGTAATAATTGAAGATTCAAATAAACTTGGAATATCTGA AAAAGGAAGAAATACTGTAGAATCACTCCTTACTGCAAGATACCAGATGTATCCAACCGTTTACATGCACCCTGCATCCA GAATTTCTGAAACAATGATAAAAAATGCTACATTAGATGCCATTCATGATAAAATATTCAAATTAGAGGATTTATCAGAA ATGGATGATATTGACCTTATAAGTACACTTAGAAACTCTGAAGGAACCCCTAAAGAAATTATAAAAAGAATAGATAAAAG AAAGTTATTTAAAAATATCACTACCCTCAGATACAGTGATTTATCACCAAAAGAAAGATGGACATTGATAAATTTATCTG AAAGTAGCAAACATCGCCTTGAAACTGAAATTTCAGAATTTTACGAAACTAGAATTTTTTTAGACATTCCAAAACCGCCT AAAATGGTGGAACATAGAATTACTGTCCTAATGGATGATAAAAAATACCGTTTAGATGAAATTTCTCCCTTAGCGGAAAG TTTAAAAAATGCATATAAAAAATCTTGGAGCATGATGATTTATTTAGAATCTGAAACATTTAATAAAATGCCCGAACTTT TAAAGGATGGAAATAAGTTTTTATTTAAATTTATAGAAAATACGCCGATAAAAAATCCAATACTTGATGTATTAAATGAA CACGGGACAGTCCAAGGAGTTACTAAACTTTCAAACCTTGTTAAAAAAAGTGCAAATGATCCAGAATTCCATTTGGAACT TCAAAAACTGATATTTTGTGGATTAGTGACTAAAAAAATAGAACCTGTTAGGGGCACTTTTCGATACGATTATAAAAGTA TATACACAGAAAGTTAA
Upstream 100 bases:
>100_bases GTATTATTTAGCACTTTAATTACTGCTGTTTCAGTATTTATGGGTATATTATCAATATATCCATATAAATTTATATATTG GATCAAAGATATTATCCAGT
Downstream 100 bases:
>100_bases AATGTATGTAGATATATTTAATCTATTTTTGACCTATAAATTATTAATGAATTGTCATTAAACACTTTTTTATTAATATC AATGATAGTTGAGTCCAAAT
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MPKLKIIRDPIHKDIKLNEEEISIVDTPEVQRLRNIKQTGLTCLVYPSANHSRFEHSIGTMHVAGEIAKNLENIDTELTK IVALLHDIGHSPFSHTLEVEGYSHEEFTREKIKKMDFTNYSPKEILEVYSSKGIEGSLIHGDVDADRMDYLVRDSHHTGV AYGTIDIPRLIRSIVIIEDSNKLGISEKGRNTVESLLTARYQMYPTVYMHPASRISETMIKNATLDAIHDKIFKLEDLSE MDDIDLISTLRNSEGTPKEIIKRIDKRKLFKNITTLRYSDLSPKERWTLINLSESSKHRLETEISEFYETRIFLDIPKPP KMVEHRITVLMDDKKYRLDEISPLAESLKNAYKKSWSMMIYLESETFNKMPELLKDGNKFLFKFIENTPIKNPILDVLNE HGTVQGVTKLSNLVKKSANDPEFHLELQKLIFCGLVTKKIEPVRGTFRYDYKSIYTES
Sequences:
>Translated_458_residues MPKLKIIRDPIHKDIKLNEEEISIVDTPEVQRLRNIKQTGLTCLVYPSANHSRFEHSIGTMHVAGEIAKNLENIDTELTK IVALLHDIGHSPFSHTLEVEGYSHEEFTREKIKKMDFTNYSPKEILEVYSSKGIEGSLIHGDVDADRMDYLVRDSHHTGV AYGTIDIPRLIRSIVIIEDSNKLGISEKGRNTVESLLTARYQMYPTVYMHPASRISETMIKNATLDAIHDKIFKLEDLSE MDDIDLISTLRNSEGTPKEIIKRIDKRKLFKNITTLRYSDLSPKERWTLINLSESSKHRLETEISEFYETRIFLDIPKPP KMVEHRITVLMDDKKYRLDEISPLAESLKNAYKKSWSMMIYLESETFNKMPELLKDGNKFLFKFIENTPIKNPILDVLNE HGTVQGVTKLSNLVKKSANDPEFHLELQKLIFCGLVTKKIEPVRGTFRYDYKSIYTES >Mature_457_residues PKLKIIRDPIHKDIKLNEEEISIVDTPEVQRLRNIKQTGLTCLVYPSANHSRFEHSIGTMHVAGEIAKNLENIDTELTKI VALLHDIGHSPFSHTLEVEGYSHEEFTREKIKKMDFTNYSPKEILEVYSSKGIEGSLIHGDVDADRMDYLVRDSHHTGVA YGTIDIPRLIRSIVIIEDSNKLGISEKGRNTVESLLTARYQMYPTVYMHPASRISETMIKNATLDAIHDKIFKLEDLSEM DDIDLISTLRNSEGTPKEIIKRIDKRKLFKNITTLRYSDLSPKERWTLINLSESSKHRLETEISEFYETRIFLDIPKPPK MVEHRITVLMDDKKYRLDEISPLAESLKNAYKKSWSMMIYLESETFNKMPELLKDGNKFLFKFIENTPIKNPILDVLNEH GTVQGVTKLSNLVKKSANDPEFHLELQKLIFCGLVTKKIEPVRGTFRYDYKSIYTES
Specific function: Unknown
COG id: COG1078
COG function: function code R; HD superfamily phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Homo sapiens, GI38016914, Length=345, Percent_Identity=26.9565217391304, Blast_Score=117, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17537827, Length=126, Percent_Identity=38.8888888888889, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17537829, Length=126, Percent_Identity=38.8888888888889, Blast_Score=86, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 - InterPro: IPR006675 - InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52945; Mature: 52813
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLKIIRDPIHKDIKLNEEEISIVDTPEVQRLRNIKQTGLTCLVYPSANHSRFEHSIGT CCCCHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHCCH MHVAGEIAKNLENIDTELTKIVALLHDIGHSPFSHTLEVEGYSHEEFTREKIKKMDFTNY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCC SPKEILEVYSSKGIEGSLIHGDVDADRMDYLVRDSHHTGVAYGTIDIPRLIRSIVIIEDS CHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCCCCEEEECCCHHHHHHEEEEEECC NKLGISEKGRNTVESLLTARYQMYPTVYMHPASRISETMIKNATLDAIHDKIFKLEDLSE CCCCCCCCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHCC MDDIDLISTLRNSEGTPKEIIKRIDKRKLFKNITTLRYSDLSPKERWTLINLSESSKHRL CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCHHHH ETEISEFYETRIFLDIPKPPKMVEHRITVLMDDKKYRLDEISPLAESLKNAYKKSWSMMI HHHHHHHHHCEEEEECCCCHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEE YLESETFNKMPELLKDGNKFLFKFIENTPIKNPILDVLNEHGTVQGVTKLSNLVKKSAND EEECCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCC PEFHLELQKLIFCGLVTKKIEPVRGTFRYDYKSIYTES CHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHCCCC >Mature Secondary Structure PKLKIIRDPIHKDIKLNEEEISIVDTPEVQRLRNIKQTGLTCLVYPSANHSRFEHSIGT CCCHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHCCH MHVAGEIAKNLENIDTELTKIVALLHDIGHSPFSHTLEVEGYSHEEFTREKIKKMDFTNY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCC SPKEILEVYSSKGIEGSLIHGDVDADRMDYLVRDSHHTGVAYGTIDIPRLIRSIVIIEDS CHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCCCCEEEECCCHHHHHHEEEEEECC NKLGISEKGRNTVESLLTARYQMYPTVYMHPASRISETMIKNATLDAIHDKIFKLEDLSE CCCCCCCCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHCC MDDIDLISTLRNSEGTPKEIIKRIDKRKLFKNITTLRYSDLSPKERWTLINLSESSKHRL CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCHHHH ETEISEFYETRIFLDIPKPPKMVEHRITVLMDDKKYRLDEISPLAESLKNAYKKSWSMMI HHHHHHHHHCEEEEECCCCHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEE YLESETFNKMPELLKDGNKFLFKFIENTPIKNPILDVLNEHGTVQGVTKLSNLVKKSAND EEECCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCC PEFHLELQKLIFCGLVTKKIEPVRGTFRYDYKSIYTES CHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]