| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is (cbiX [H]
Identifier: 150399912
GI number: 150399912
Start: 1182798
End: 1183250
Strand: Reverse
Name: (cbiX [H]
Synonym: Mevan_1169
Alternate gene names: 150399912
Gene position: 1183250-1182798 (Counterclockwise)
Preceding gene: 150399913
Following gene: 150399909
Centisome position: 68.79
GC content: 36.42
Gene sequence:
>453_bases ATGGAAGCTTTAGTTTTGGTAGGCCATGGAAGCAGGCTCCCTCACTCAAAAAGTGTTGTAAATGAAGTTGCAGAAAAGAT AAAATTGAGAGAGGATTATGATATTGTTGAAGTTGGAATGATGGAGTTTAACGAACCTACAATTCCTCAAGCAATTAGAA AAGTGATTGATATGGGTGCAAAAAAGATAATAGTAACACCTGTATTTTTAGCCCCTGGAAACCATACTGAAAGGGATATT CCAAAAATATTGGGAATATATAAAGGAGATAATGGTTGTAGTGGACATCACCACCATCATGAACACGGGCATGAATGCGA TGGACATCACCATCACCACCATCATTGCGAAGAACTTGAAATTCCAAGCGATGTTGAAATAATATATAGAAAACCAATGG GTGCAGATGATAGAATCGTTGATATTGTTTTAGATAGAACAAAAGGTCTTTAA
Upstream 100 bases:
>100_bases TTAAGCAACTATTTTAAAAAAATAGAAACATATATATTTCGGTATATCAAAATAAACATGAATATTAAAAATGAATTCAA AAATATTACAGGTGTAAGTT
Downstream 100 bases:
>100_bases AACAACTTTTATTTTAAAAAATAAAAAAGTAGGAATTTTATAATTTAAGCTACAATTACTTCTTTTTCCTTTTTTTCTTC AGAATCAACATATAGCTTTT
Product: sirohydrochlorin cobaltochelatase
Products: NA
Alternate protein names: CbiXS [H]
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MEALVLVGHGSRLPHSKSVVNEVAEKIKLREDYDIVEVGMMEFNEPTIPQAIRKVIDMGAKKIIVTPVFLAPGNHTERDI PKILGIYKGDNGCSGHHHHHEHGHECDGHHHHHHHCEELEIPSDVEIIYRKPMGADDRIVDIVLDRTKGL
Sequences:
>Translated_150_residues MEALVLVGHGSRLPHSKSVVNEVAEKIKLREDYDIVEVGMMEFNEPTIPQAIRKVIDMGAKKIIVTPVFLAPGNHTERDI PKILGIYKGDNGCSGHHHHHEHGHECDGHHHHHHHCEELEIPSDVEIIYRKPMGADDRIVDIVLDRTKGL >Mature_150_residues MEALVLVGHGSRLPHSKSVVNEVAEKIKLREDYDIVEVGMMEFNEPTIPQAIRKVIDMGAKKIIVTPVFLAPGNHTERDI PKILGIYKGDNGCSGHHHHHEHGHECDGHHHHHHHCEELEIPSDVEIIYRKPMGADDRIVDIVLDRTKGL
Specific function: Chelates cobalt to the cobalamin precursor as part of the anaerobic pathway to cobalamin biosynthesis [H]
COG id: COG2138
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbiX family. CbiXS subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002762 [H]
Pfam domain/function: PF01903 CbiX [H]
EC number: =4.99.1.3 [H]
Molecular weight: Translated: 16922; Mature: 16922
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEALVLVGHGSRLPHSKSVVNEVAEKIKLREDYDIVEVGMMEFNEPTIPQAIRKVIDMGA CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECHHCCCCCCHHHHHHHHHHCCC KKIIVTPVFLAPGNHTERDIPKILGIYKGDNGCSGHHHHHEHGHECDGHHHHHHHCEELE CEEEEEEEEECCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC IPSDVEIIYRKPMGADDRIVDIVLDRTKGL CCCCCEEEEECCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MEALVLVGHGSRLPHSKSVVNEVAEKIKLREDYDIVEVGMMEFNEPTIPQAIRKVIDMGA CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECHHCCCCCCHHHHHHHHHHCCC KKIIVTPVFLAPGNHTERDIPKILGIYKGDNGCSGHHHHHEHGHECDGHHHHHHHCEELE CEEEEEEEEECCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC IPSDVEIIYRKPMGADDRIVDIVLDRTKGL CCCCCEEEEECCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA