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The map label for this gene is 150399890

Identifier: 150399890

GI number: 150399890

Start: 1160247

End: 1161176

Strand: Reverse

Name: 150399890

Synonym: Mevan_1146

Alternate gene names: NA

Gene position: 1161176-1160247 (Counterclockwise)

Preceding gene: 150399891

Following gene: 150399889

Centisome position: 67.51

GC content: 31.08

Gene sequence:

>930_bases
ATGAAAAACTTCCAAAGCCGTTTATTTAAAAATTATATTTATTTCGGTGAAAATATGTCAAACGAATTATTTGAAACCCT
TACGAGCAATATCCATTTTAACGTGACAGAATTAGGTAGAAAAACGTGGAATCAGAACTGGATAGTTCCAGAATACCTTA
TTACAATTGCAGGCCTTAAAAACGGTAAAAGACCAGTATTTTACTATGGAGTTACTGAAAACTACAGGACAAATTTTGTA
TTAAAAAAAGGAACTTCAGAAAATGGAAACAAATACATCAATGCAAGAGTATACTTTAGATTTTGTAAAGATACAATTAC
TGAAAAAGAAAAGTACGTTGTTGCAAATGGATTTAACGGGCTTTTACTCGCAATAAAAATAGGAAAAACTGAATTTATAA
GTACTTTTAAAAATATGCTCCTTGAAGACTACCAAAGAGGAGATTTGCATACGATAGAAGTTTTAGAAAGAATGAAAGAT
AGAAATGTCTTTGAGTCAGTTGAAGAAAGTGCACAGTATATTGCAAACAGAGATTATAACTGGTTAATCGGCAGATTAAA
ATACAAAGGCAAGTTATTTAATTATTCAGGACAGGGTTACTGGTTAATTCCTTTAAAAACCCAGATGGAATTAACTAACG
GCTTTAATGAAGATGAATGTGATTTAACAGTAGACCTCGAAAATACCGATGTATTTGAAAATTACTTGATATACGTAGAT
ACGAAAAATAGTGTTGTAAGATACAATGGTGAAAGACTCTGTACTTCAGGATATTCGCTTGCAGAAGAATTAAAAAAGCA
CAATGATGAAAATACCTGCCCATGGTGCAGTGAAAAATTGAAATTAATTAGGACTAAAAAAGGAGAATTTTTAGGATGTT
CATCATACCCAACGTGTTTATACAGGCGGTTTTTAAATAAAAAACAGTGA

Upstream 100 bases:

>100_bases
ATAGACAGTGTATACATCCAAAATGCAGACGAAATTTGTGAAAATGTGCATTACTTTTTGAAAAATAACAAACCTTACGT
CATGGTCGTAGAATGCGAAA

Downstream 100 bases:

>100_bases
TTCTTCTTTAAATTTTATTTATTCTTTTTTTTTGGTGACTGTGATGGAATTAAAAAGAATAGATGTCAAAGGCATCGTTC
AGGGAGTTGGATTTCGACCT

Product: DNA topoisomerase type IA Zn finger domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKNFQSRLFKNYIYFGENMSNELFETLTSNIHFNVTELGRKTWNQNWIVPEYLITIAGLKNGKRPVFYYGVTENYRTNFV
LKKGTSENGNKYINARVYFRFCKDTITEKEKYVVANGFNGLLLAIKIGKTEFISTFKNMLLEDYQRGDLHTIEVLERMKD
RNVFESVEESAQYIANRDYNWLIGRLKYKGKLFNYSGQGYWLIPLKTQMELTNGFNEDECDLTVDLENTDVFENYLIYVD
TKNSVVRYNGERLCTSGYSLAEELKKHNDENTCPWCSEKLKLIRTKKGEFLGCSSYPTCLYRRFLNKKQ

Sequences:

>Translated_309_residues
MKNFQSRLFKNYIYFGENMSNELFETLTSNIHFNVTELGRKTWNQNWIVPEYLITIAGLKNGKRPVFYYGVTENYRTNFV
LKKGTSENGNKYINARVYFRFCKDTITEKEKYVVANGFNGLLLAIKIGKTEFISTFKNMLLEDYQRGDLHTIEVLERMKD
RNVFESVEESAQYIANRDYNWLIGRLKYKGKLFNYSGQGYWLIPLKTQMELTNGFNEDECDLTVDLENTDVFENYLIYVD
TKNSVVRYNGERLCTSGYSLAEELKKHNDENTCPWCSEKLKLIRTKKGEFLGCSSYPTCLYRRFLNKKQ
>Mature_309_residues
MKNFQSRLFKNYIYFGENMSNELFETLTSNIHFNVTELGRKTWNQNWIVPEYLITIAGLKNGKRPVFYYGVTENYRTNFV
LKKGTSENGNKYINARVYFRFCKDTITEKEKYVVANGFNGLLLAIKIGKTEFISTFKNMLLEDYQRGDLHTIEVLERMKD
RNVFESVEESAQYIANRDYNWLIGRLKYKGKLFNYSGQGYWLIPLKTQMELTNGFNEDECDLTVDLENTDVFENYLIYVD
TKNSVVRYNGERLCTSGYSLAEELKKHNDENTCPWCSEKLKLIRTKKGEFLGCSSYPTCLYRRFLNKKQ

Specific function: Unknown

COG id: COG0551

COG function: function code L; Zn-finger domain associated with topoisomerase type I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013498 [H]

Pfam domain/function: PF01396 zf-C4_Topoisom [H]

EC number: NA

Molecular weight: Translated: 36447; Mature: 36447

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFQSRLFKNYIYFGENMSNELFETLTSNIHFNVTELGRKTWNQNWIVPEYLITIAGLK
CCCHHHHHHHHHHEECCCCCHHHHHHHHCCCEEEHHHHHHHHCCCCCCCHHHHHHHHCCC
NGKRPVFYYGVTENYRTNFVLKKGTSENGNKYINARVYFRFCKDTITEKEKYVVANGFNG
CCCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEEEEEHHHHHCCCCEEEEEECCCC
LLLAIKIGKTEFISTFKNMLLEDYQRGDLHTIEVLERMKDRNVFESVEESAQYIANRDYN
EEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
WLIGRLKYKGKLFNYSGQGYWLIPLKTQMELTNGFNEDECDLTVDLENTDVFENYLIYVD
EEEEEEEECCEEEEECCCEEEEEEECEEEHHHCCCCCCCCCEEEEECCCCCCCEEEEEEE
TKNSVVRYNGERLCTSGYSLAEELKKHNDENTCPWCSEKLKLIRTKKGEFLGCSSYPTCL
CCCCEEEECCCEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEECCCCHHHH
YRRFLNKKQ
HHHHHCCCC
>Mature Secondary Structure
MKNFQSRLFKNYIYFGENMSNELFETLTSNIHFNVTELGRKTWNQNWIVPEYLITIAGLK
CCCHHHHHHHHHHEECCCCCHHHHHHHHCCCEEEHHHHHHHHCCCCCCCHHHHHHHHCCC
NGKRPVFYYGVTENYRTNFVLKKGTSENGNKYINARVYFRFCKDTITEKEKYVVANGFNG
CCCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEEEEEHHHHHCCCCEEEEEECCCC
LLLAIKIGKTEFISTFKNMLLEDYQRGDLHTIEVLERMKDRNVFESVEESAQYIANRDYN
EEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
WLIGRLKYKGKLFNYSGQGYWLIPLKTQMELTNGFNEDECDLTVDLENTDVFENYLIYVD
EEEEEEEECCEEEEECCCEEEEEEECEEEHHHCCCCCCCCCEEEEECCCCCCCEEEEEEE
TKNSVVRYNGERLCTSGYSLAEELKKHNDENTCPWCSEKLKLIRTKKGEFLGCSSYPTCL
CCCCEEEECCCEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEECCCCHHHH
YRRFLNKKQ
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]