| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399846
Identifier: 150399846
GI number: 150399846
Start: 1115716
End: 1116321
Strand: Reverse
Name: 150399846
Synonym: Mevan_1101
Alternate gene names: NA
Gene position: 1116321-1115716 (Counterclockwise)
Preceding gene: 150399847
Following gene: 150399845
Centisome position: 64.9
GC content: 25.58
Gene sequence:
>606_bases ATGATGCCAGTTTTTTTAGACTTAAAAGGATTTAATGTTTTAATTTTTGGTTTCGGTAATGTTGGAAAGCGTAGATTTGA AAAATTTCTAAAATCGAACGCTAAATTGACGGTTTACTCTGAAAAAATTGAAAAAGAAGATATTTTAAATTACCCTAAGG TAAAATTTTTTGAAGAAAATGTAAATAATTTAAGTAATGAAGAACTATATTCAATAATAAAAAATTTTGATATTATAATA ACTGCAGTAGATAAAAAAAATAACAATAGAATAGTTGAAATTGCTACCTACCTTAAAAAGTATATAAATTCCTCAACATT TGAAGATAAGGTAAATTTAGTAGTTCCTGCATGCTTTGAAGAAAATGGAGTTTCTTTTGCAATATATACTGGTGGAAAGA GCCCAATAGTTGCAAGAGAAGTTAGAAAAGTTGTTCAAAACTACTTAAAAAACTCAGAAGATAACATTGAAATACAAGAT AAGTTGCGGAATTTTTTAAAAGATGAAATTAAAGACCAAGAATTACGTAAAAAAATTCTTGAAAAGGTATTTTCTAATAA ACAGTTTAAGCTGGAATTTTTAGAACTGATTGAAAAACATAGGTGA
Upstream 100 bases:
>100_bases TTAGAATTTTCAAAAAAGTTTTCTTGGGACGTTTCTTCAAAAAAAACCTTTGAAGTATATAAAAACCTGCTTGAAAAGTA ATAGATATAAGTGTGTAATT
Downstream 100 bases:
>100_bases ATCTATGTTGGTTATTAAAGCAGATTATAAAAAATATCCATTACCGGTTCTTGAAAGCATGCGAATTAATGAAGATGAAT TTTACGGTAAGTACGATGCT
Product: siroheme synthase
Products: sirohydrochlorin; NADH; H+
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MMPVFLDLKGFNVLIFGFGNVGKRRFEKFLKSNAKLTVYSEKIEKEDILNYPKVKFFEENVNNLSNEELYSIIKNFDIII TAVDKKNNNRIVEIATYLKKYINSSTFEDKVNLVVPACFEENGVSFAIYTGGKSPIVAREVRKVVQNYLKNSEDNIEIQD KLRNFLKDEIKDQELRKKILEKVFSNKQFKLEFLELIEKHR
Sequences:
>Translated_201_residues MMPVFLDLKGFNVLIFGFGNVGKRRFEKFLKSNAKLTVYSEKIEKEDILNYPKVKFFEENVNNLSNEELYSIIKNFDIII TAVDKKNNNRIVEIATYLKKYINSSTFEDKVNLVVPACFEENGVSFAIYTGGKSPIVAREVRKVVQNYLKNSEDNIEIQD KLRNFLKDEIKDQELRKKILEKVFSNKQFKLEFLELIEKHR >Mature_201_residues MMPVFLDLKGFNVLIFGFGNVGKRRFEKFLKSNAKLTVYSEKIEKEDILNYPKVKFFEENVNNLSNEELYSIIKNFDIII TAVDKKNNNRIVEIATYLKKYINSSTFEDKVNLVVPACFEENGVSFAIYTGGKSPIVAREVRKVVQNYLKNSEDNIEIQD KLRNFLKDEIKDQELRKKILEKVFSNKQFKLEFLELIEKHR
Specific function: Unknown
COG id: COG1648
COG function: function code H; Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011128 - InterPro: IPR016040 - InterPro: IPR006367 [H]
Pfam domain/function: PF01210 NAD_Gly3P_dh_N [H]
EC number: 1.3.1.76; 4.99.1.4
Molecular weight: Translated: 23620; Mature: 23620
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPVFLDLKGFNVLIFGFGNVGKRRFEKFLKSNAKLTVYSEKIEKEDILNYPKVKFFEEN CCCEEEEECCCEEEEEECCCCCHHHHHHHHHCCCEEEEEHHHHCHHHHCCCCCHHHHHHH VNNLSNEELYSIIKNFDIIITAVDKKNNNRIVEIATYLKKYINSSTFEDKVNLVVPACFE HCCCCHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHHHHHHHCCCCCCCCCCEEEEEEEC ENGVSFAIYTGGKSPIVAREVRKVVQNYLKNSEDNIEIQDKLRNFLKDEIKDQELRKKIL CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCHHHHHHHHH EKVFSNKQFKLEFLELIEKHR HHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure MMPVFLDLKGFNVLIFGFGNVGKRRFEKFLKSNAKLTVYSEKIEKEDILNYPKVKFFEEN CCCEEEEECCCEEEEEECCCCCHHHHHHHHHCCCEEEEEHHHHCHHHHCCCCCHHHHHHH VNNLSNEELYSIIKNFDIIITAVDKKNNNRIVEIATYLKKYINSSTFEDKVNLVVPACFE HCCCCHHHHHHHHCCCEEEEEEECCCCCCEEHHHHHHHHHHHCCCCCCCCCCEEEEEEEC ENGVSFAIYTGGKSPIVAREVRKVVQNYLKNSEDNIEIQDKLRNFLKDEIKDQELRKKIL CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCHHHHHHHHH EKVFSNKQFKLEFLELIEKHR HHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Precorrin 2; NAD+
Specific reaction: precorrin-2 + NAD+ = sirohydrochlorin + NADH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]