| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399812
Identifier: 150399812
GI number: 150399812
Start: 1083919
End: 1084830
Strand: Reverse
Name: 150399812
Synonym: Mevan_1067
Alternate gene names: NA
Gene position: 1084830-1083919 (Counterclockwise)
Preceding gene: 150399813
Following gene: 150399807
Centisome position: 63.07
GC content: 31.36
Gene sequence:
>912_bases ATGGAGCTAACAGTTGTTCAAAAAGAAATATTGCAGGAATTACTCCAAATATATAAAGAAAAAAATAAGGCTGTTAAAGG AACTGAAATTGCCGTTAGATTAAGTAGAAATCCTGGAACTATTAGAAACCAGATGCAAGCTTTAAGGGCTTTAAACCTCG TAGATGGAGTTCCCGGGCCAAAGGGCGGATACATTCCCACAAGCCAAACTTATAGGTCATTAGGGCTCGAAATTAAGGAA GAAATTGTTGTTCCAATTTATAAGGGTGAAGAAAGAATTGAAGGAGTAAATGTTACTAAAATTGTCTTTGATACCGTAAC TCATGAAAGGTCATGTTCTTCAAAGATATATATTGCAGGAGACACAAGAAAATTTTCTGAAAACGATATTGTAAAAATTG GGCCAACTCACCACAATAAAATTGTAATACTTGGAAAAGTTGTTGGACGGGATGATATTAACCATATTTTACTTATAGAC GTAATTGGCGTTGCAAGTGTCCCATATATTTCTGTATCAGAAGTTGGAACTAAAGATGAATTGATAAGTATTAGACCCGA TGAAACAGTTAAAAACACTGCAAAAGTGCTATCTGAAAAAAATATTAGTGGAATTCCAATAATGGAAGATAAAAAACTTT TAGGAATAATAAGTCTTCATGATATTGCTGACGCAGTTTCAAAAGGTCTTGAAAACGAAAAAGTATCTAAAATCATGGCC ACAAATACATTCACAATCTCGAAAGATAAAAAAATATACGATGCGCTTATTTTAATGGAAAAAAATAACGTTGGAAGGTT AATTATTGTAAATGAATATGAAGATACCGTTGGAATTATTACAAGAACAGATATTTTAAAATTAATTGAAGGAACAATAT TTCCAAAAATATTAAAAGGCTATTTAAAATAA
Upstream 100 bases:
>100_bases TTTCGATGTTAAACCAAAAGATTATTATATATCTAAAAAATCATAGTATATATGTCACTATTTATAATCACTATTTATAA TCATTGATAATGGTGGGGCT
Downstream 100 bases:
>100_bases AAAAGAGTTATTTCATTCTTTTTTTAAATTCTTCGTTTAATTCTTCATAAGAAATTCCGAATTTTGCAAGTAAGACAAAC GTGTGAAAAATTAAATCTGC
Product: signal transduction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MELTVVQKEILQELLQIYKEKNKAVKGTEIAVRLSRNPGTIRNQMQALRALNLVDGVPGPKGGYIPTSQTYRSLGLEIKE EIVVPIYKGEERIEGVNVTKIVFDTVTHERSCSSKIYIAGDTRKFSENDIVKIGPTHHNKIVILGKVVGRDDINHILLID VIGVASVPYISVSEVGTKDELISIRPDETVKNTAKVLSEKNISGIPIMEDKKLLGIISLHDIADAVSKGLENEKVSKIMA TNTFTISKDKKIYDALILMEKNNVGRLIIVNEYEDTVGIITRTDILKLIEGTIFPKILKGYLK
Sequences:
>Translated_303_residues MELTVVQKEILQELLQIYKEKNKAVKGTEIAVRLSRNPGTIRNQMQALRALNLVDGVPGPKGGYIPTSQTYRSLGLEIKE EIVVPIYKGEERIEGVNVTKIVFDTVTHERSCSSKIYIAGDTRKFSENDIVKIGPTHHNKIVILGKVVGRDDINHILLID VIGVASVPYISVSEVGTKDELISIRPDETVKNTAKVLSEKNISGIPIMEDKKLLGIISLHDIADAVSKGLENEKVSKIMA TNTFTISKDKKIYDALILMEKNNVGRLIIVNEYEDTVGIITRTDILKLIEGTIFPKILKGYLK >Mature_303_residues MELTVVQKEILQELLQIYKEKNKAVKGTEIAVRLSRNPGTIRNQMQALRALNLVDGVPGPKGGYIPTSQTYRSLGLEIKE EIVVPIYKGEERIEGVNVTKIVFDTVTHERSCSSKIYIAGDTRKFSENDIVKIGPTHHNKIVILGKVVGRDDINHILLID VIGVASVPYISVSEVGTKDELISIRPDETVKNTAKVLSEKNISGIPIMEDKKLLGIISLHDIADAVSKGLENEKVSKIMA TNTFTISKDKKIYDALILMEKNNVGRLIIVNEYEDTVGIITRTDILKLIEGTIFPKILKGYLK
Specific function: Unknown
COG id: COG2524
COG function: function code K; Predicted transcriptional regulator, contains C-terminal CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001807 - InterPro: IPR000644 - InterPro: IPR016436 - InterPro: IPR005104 - InterPro: IPR011991 [H]
Pfam domain/function: PF00571 CBS; PF03444 DUF293 [H]
EC number: NA
Molecular weight: Translated: 33657; Mature: 33657
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTVVQKEILQELLQIYKEKNKAVKGTEIAVRLSRNPGTIRNQMQALRALNLVDGVPGP CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC KGGYIPTSQTYRSLGLEIKEEIVVPIYKGEERIEGVNVTKIVFDTVTHERSCSSKIYIAG CCCCCCCHHHHHHHCCEEECEEEEEEECCHHHHCCCCEEHEEEEHHHCCCCCCCEEEEEE DTRKFSENDIVKIGPTHHNKIVILGKVVGRDDINHILLIDVIGVASVPYISVSEVGTKDE CCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEHHHCCCCEEEHHCCCCCCC LISIRPDETVKNTAKVLSEKNISGIPIMEDKKLLGIISLHDIADAVSKGLENEKVSKIMA EEEECCCHHHHHHHHHHHCCCCCCCCEECCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHC TNTFTISKDKKIYDALILMEKNNVGRLIIVNEYEDTVGIITRTDILKLIEGTIFPKILKG CCEEEECCCCEEEEEEEEEECCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHH YLK HCC >Mature Secondary Structure MELTVVQKEILQELLQIYKEKNKAVKGTEIAVRLSRNPGTIRNQMQALRALNLVDGVPGP CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC KGGYIPTSQTYRSLGLEIKEEIVVPIYKGEERIEGVNVTKIVFDTVTHERSCSSKIYIAG CCCCCCCHHHHHHHCCEEECEEEEEEECCHHHHCCCCEEHEEEEHHHCCCCCCCEEEEEE DTRKFSENDIVKIGPTHHNKIVILGKVVGRDDINHILLIDVIGVASVPYISVSEVGTKDE CCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEHHHCCCCEEEHHCCCCCCC LISIRPDETVKNTAKVLSEKNISGIPIMEDKKLLGIISLHDIADAVSKGLENEKVSKIMA EEEECCCHHHHHHHHHHHCCCCCCCCEECCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHC TNTFTISKDKKIYDALILMEKNNVGRLIIVNEYEDTVGIITRTDILKLIEGTIFPKILKG CCEEEECCCCEEEEEEEEEECCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHH YLK HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]