Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

Click here to switch to the map view.

The map label for this gene is 150399784

Identifier: 150399784

GI number: 150399784

Start: 1056343

End: 1057398

Strand: Reverse

Name: 150399784

Synonym: Mevan_1036

Alternate gene names: NA

Gene position: 1057398-1056343 (Counterclockwise)

Preceding gene: 150399785

Following gene: 150399783

Centisome position: 61.47

GC content: 28.41

Gene sequence:

>1056_bases
ATGAATGTAAGACGTAAAAAAGAACCGAGTTTTTTAGATAAACTGTCGAATTTATTAAAAAGTACTAAAATTACGAAACG
GAAAAATGTTTCAAGGGTTGGAAGGTCAGAATACTTAAAAAAAATATTTGATAGAAAAAAAGAAACATTTACGGAAGACG
AAATTTTAGAATTTTATGAACCATACATTAATGAAACTCCAGAAGTAACTATTGATATAGACGATATTTTATTTGAAAAG
CGTTTTGGCGCATTACAAGGTTATTCGGATTCTTTTTCGTATTGGGTTACAAATACATCATTTTTGCCATCAAAAAGAGA
TTACCAGTATGCTGGAATTATTGATGAACGTGTTTATTTTTTAAAAATAATTGTTTTTTCAATATTTGCGGTTATTTTAC
TTTTTTTATATGGAGTAATTACTTCTGATCCCATATCTGGAATTACTAATGGAATTATTTTTGCATTAATTATCCTATTT
GGAGGAATATTTTATCCAAAATTAAAACTTACACTATTTAGGGGAGAAATAAAGATTCAAGTGTTAATGAGTATATTACA
CCTTATATCAATGCTGAATTCCGGAGCGTCAGTCCAAGAAGCTATTAAAAATATTGCAAATAATCCAGAATACGGTTTAA
CCTCTTACGAATTTAGGAGCATTATAAAAGATATTAATCAAGGAGGATATAACTTTGTAGAAGCACTAGAACGGGCAAAA
GTAAGGTCAAAAATACCTCTTCTAAAAAAACTTTATGATCAATTAATTCTTGCTGCAAATAAAGGTGGAACCCAGTTATT
ACTTGAAAACCTGTATAATGAAATAGTAAGGGAATCACTATCCAAAATTGATTCTTCAAAGTTTCAAATTTCAAATTTAG
GTAATTTAATATTTGGTATAGGCCTTATTATACCATTTTCAGGTATGATACAGTCTGCATTAGGGGCTCAGCAGGGTTTT
GATGGAATTATTAATGCTATTGACTTAGTAATGACTAAAATAGGGCTTTTATCTACCATAATTTTTACAATATTTATTAA
AATGAAAATAGAGTGA

Upstream 100 bases:

>100_bases
ACAATATTAACGGAATTAAAAAGGTAGGGGATGTAATTAAACAGTATCAAGAAAACCCAGAAAATGTTTTAAAGCATATA
CTGGAGTAGTTGTGATTTTA

Downstream 100 bases:

>100_bases
AAAAATGGATATGTCTGCATCAATATCCAGAATTTATAATTATTTAATTAAAAGAAACCTACGGATACTTAAAAAAACCG
GTAAAAATGTAGATGAAAGA

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MNVRRKKEPSFLDKLSNLLKSTKITKRKNVSRVGRSEYLKKIFDRKKETFTEDEILEFYEPYINETPEVTIDIDDILFEK
RFGALQGYSDSFSYWVTNTSFLPSKRDYQYAGIIDERVYFLKIIVFSIFAVILLFLYGVITSDPISGITNGIIFALIILF
GGIFYPKLKLTLFRGEIKIQVLMSILHLISMLNSGASVQEAIKNIANNPEYGLTSYEFRSIIKDINQGGYNFVEALERAK
VRSKIPLLKKLYDQLILAANKGGTQLLLENLYNEIVRESLSKIDSSKFQISNLGNLIFGIGLIIPFSGMIQSALGAQQGF
DGIINAIDLVMTKIGLLSTIIFTIFIKMKIE

Sequences:

>Translated_351_residues
MNVRRKKEPSFLDKLSNLLKSTKITKRKNVSRVGRSEYLKKIFDRKKETFTEDEILEFYEPYINETPEVTIDIDDILFEK
RFGALQGYSDSFSYWVTNTSFLPSKRDYQYAGIIDERVYFLKIIVFSIFAVILLFLYGVITSDPISGITNGIIFALIILF
GGIFYPKLKLTLFRGEIKIQVLMSILHLISMLNSGASVQEAIKNIANNPEYGLTSYEFRSIIKDINQGGYNFVEALERAK
VRSKIPLLKKLYDQLILAANKGGTQLLLENLYNEIVRESLSKIDSSKFQISNLGNLIFGIGLIIPFSGMIQSALGAQQGF
DGIINAIDLVMTKIGLLSTIIFTIFIKMKIE
>Mature_351_residues
MNVRRKKEPSFLDKLSNLLKSTKITKRKNVSRVGRSEYLKKIFDRKKETFTEDEILEFYEPYINETPEVTIDIDDILFEK
RFGALQGYSDSFSYWVTNTSFLPSKRDYQYAGIIDERVYFLKIIVFSIFAVILLFLYGVITSDPISGITNGIIFALIILF
GGIFYPKLKLTLFRGEIKIQVLMSILHLISMLNSGASVQEAIKNIANNPEYGLTSYEFRSIIKDINQGGYNFVEALERAK
VRSKIPLLKKLYDQLILAANKGGTQLLLENLYNEIVRESLSKIDSSKFQISNLGNLIFGIGLIIPFSGMIQSALGAQQGF
DGIINAIDLVMTKIGLLSTIIFTIFIKMKIE

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018076 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 39879; Mature: 39879

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVRRKKEPSFLDKLSNLLKSTKITKRKNVSRVGRSEYLKKIFDRKKETFTEDEILEFYE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
PYINETPEVTIDIDDILFEKRFGALQGYSDSFSYWVTNTSFLPSKRDYQYAGIIDERVYF
HHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH
LKIIVFSIFAVILLFLYGVITSDPISGITNGIIFALIILFGGIFYPKLKLTLFRGEIKIQ
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHH
VLMSILHLISMLNSGASVQEAIKNIANNPEYGLTSYEFRSIIKDINQGGYNFVEALERAK
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
VRSKIPLLKKLYDQLILAANKGGTQLLLENLYNEIVRESLSKIDSSKFQISNLGNLIFGI
HHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GLIIPFSGMIQSALGAQQGFDGIINAIDLVMTKIGLLSTIIFTIFIKMKIE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNVRRKKEPSFLDKLSNLLKSTKITKRKNVSRVGRSEYLKKIFDRKKETFTEDEILEFYE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
PYINETPEVTIDIDDILFEKRFGALQGYSDSFSYWVTNTSFLPSKRDYQYAGIIDERVYF
HHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH
LKIIVFSIFAVILLFLYGVITSDPISGITNGIIFALIILFGGIFYPKLKLTLFRGEIKIQ
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHH
VLMSILHLISMLNSGASVQEAIKNIANNPEYGLTSYEFRSIIKDINQGGYNFVEALERAK
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
VRSKIPLLKKLYDQLILAANKGGTQLLLENLYNEIVRESLSKIDSSKFQISNLGNLIFGI
HHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GLIIPFSGMIQSALGAQQGFDGIINAIDLVMTKIGLLSTIIFTIFIKMKIE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]