| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399766
Identifier: 150399766
GI number: 150399766
Start: 1029326
End: 1030351
Strand: Reverse
Name: 150399766
Synonym: Mevan_1018
Alternate gene names: NA
Gene position: 1030351-1029326 (Counterclockwise)
Preceding gene: 150399767
Following gene: 150399765
Centisome position: 59.9
GC content: 36.26
Gene sequence:
>1026_bases ATGAAAGTTACGGTATATGGTGCGGGTAACCAGAATCTTTATGTTAATCAACTAAAGTTACCTGAATCGTTTGGTGGTAC TGCCCCTTATGGTGGGAGCAGAATGGCGATAGAATTTGCAAAAGCTGGCCACGAAGTTATTTTAGCAGAAATTAATAAAT CAAACCTAAACGATGAACAATGGAGTATTGTTGAAAGTGCAGGAGTAAATGTTGTATCTGACGATATTGAAGCTTCAAAA AATGCAGAAATCGCAATATTTTTCACTCCGTTTGGTAAAAAAACGGTTGAAATCGCTAAAAAAATTTTACCTCATCTTCC AGAAAATGCAATAATTGCAAATACATGCACAGTTTCTCCTGTTACATTATACGCAATGCTTGAAGTTGAATTAAGAACCA AACGAAAAGACATAGGTATTACTTCAATGCACCCAGCAGCAGTTCCGGGAACTCCTCAACATGGGCACTATGTAATAAGC AATAAGGCTACAAATGGTACTTCATATGCAAATGATGAACAGATACAAAAATGTGTACGGCTTACTGAAAGTGTGGACAA AGTGCCTTATTTAATCCCTGCAGATGTTTCAGCAACGGTTTCAGACATGGGTTCACTATTAACTGCAGTTACACTTTCAG GTGTTTTAGATTACTATTCGGTTGGAACAAAAATTATTAAAGCTCCAAAGAAAATGGTAGAACAGCAAATTTTAATGACT TTACAAACAATGGCATCCTTAGTTGAAACTTCGGGAGTAAATGGCCTTTTAAAAGCGTTAAATCCAGAATTACTTACAAA AACTGCATCATCAATGCATCTACTTGAAAAACAAAAAGATTTAGATGCAGCACTCGATATTTTAAAGAGCTTAGATGGTG AATTAAAGCACGCATCTGAAAATGCAGAAATAAAACCTACAACTCTTGTTGCAGCGCAATCTCTTGTTAAAGAATTAGAA ACGTTAATTGGCGGGGCTGCAGCAAATGGTGCAATAAAAAGAAGTACTAGGAAGCTCTTCCAATAG
Upstream 100 bases:
>100_bases ATAATTATGAGTTATTAGGTAATAATTGCATCGTAATAGAAAGGATTTAATAATTTGACTGCCTATAATAGTTACGTTTT TATTTTTTAAAGGTGGTCTA
Downstream 100 bases:
>100_bases GTGTAGTATGGTAAAAGAACTTAAAATTGTAGTAATGGGTTCAGAAGACGTTGGTAAAACATCACTCATGGATGCCTTAA TTAAAAATGTTTCAAAAGTG
Product: H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-like protein
Products: 5,10-methenyltetrahydromethanopterin; reduced coenzyme F420
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MKVTVYGAGNQNLYVNQLKLPESFGGTAPYGGSRMAIEFAKAGHEVILAEINKSNLNDEQWSIVESAGVNVVSDDIEASK NAEIAIFFTPFGKKTVEIAKKILPHLPENAIIANTCTVSPVTLYAMLEVELRTKRKDIGITSMHPAAVPGTPQHGHYVIS NKATNGTSYANDEQIQKCVRLTESVDKVPYLIPADVSATVSDMGSLLTAVTLSGVLDYYSVGTKIIKAPKKMVEQQILMT LQTMASLVETSGVNGLLKALNPELLTKTASSMHLLEKQKDLDAALDILKSLDGELKHASENAEIKPTTLVAAQSLVKELE TLIGGAAANGAIKRSTRKLFQ
Sequences:
>Translated_341_residues MKVTVYGAGNQNLYVNQLKLPESFGGTAPYGGSRMAIEFAKAGHEVILAEINKSNLNDEQWSIVESAGVNVVSDDIEASK NAEIAIFFTPFGKKTVEIAKKILPHLPENAIIANTCTVSPVTLYAMLEVELRTKRKDIGITSMHPAAVPGTPQHGHYVIS NKATNGTSYANDEQIQKCVRLTESVDKVPYLIPADVSATVSDMGSLLTAVTLSGVLDYYSVGTKIIKAPKKMVEQQILMT LQTMASLVETSGVNGLLKALNPELLTKTASSMHLLEKQKDLDAALDILKSLDGELKHASENAEIKPTTLVAAQSLVKELE TLIGGAAANGAIKRSTRKLFQ >Mature_341_residues MKVTVYGAGNQNLYVNQLKLPESFGGTAPYGGSRMAIEFAKAGHEVILAEINKSNLNDEQWSIVESAGVNVVSDDIEASK NAEIAIFFTPFGKKTVEIAKKILPHLPENAIIANTCTVSPVTLYAMLEVELRTKRKDIGITSMHPAAVPGTPQHGHYVIS NKATNGTSYANDEQIQKCVRLTESVDKVPYLIPADVSATVSDMGSLLTAVTLSGVLDYYSVGTKIIKAPKKMVEQQILMT LQTMASLVETSGVNGLLKALNPELLTKTASSMHLLEKQKDLDAALDILKSLDGELKHASENAEIKPTTLVAAQSLVKELE TLIGGAAANGAIKRSTRKLFQ
Specific function: Unknown
COG id: COG4007
COG function: function code R; Predicted dehydrogenase related to H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HMD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR010063 - InterPro: IPR004889 - InterPro: IPR016040 [H]
Pfam domain/function: PF03201 HMD [H]
EC number: 1.5.99.9
Molecular weight: Translated: 36634; Mature: 36634
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVTVYGAGNQNLYVNQLKLPESFGGTAPYGGSRMAIEFAKAGHEVILAEINKSNLNDEQ CEEEEEECCCCCEEEEEEECCHHCCCCCCCCCCEEEEEEHHCCCEEEEEEECCCCCCCHH WSIVESAGVNVVSDDIEASKNAEIAIFFTPFGKKTVEIAKKILPHLPENAIIANTCTVSP HHHHHHCCCEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCC VTLYAMLEVELRTKRKDIGITSMHPAAVPGTPQHGHYVISNKATNGTSYANDEQIQKCVR EEEEHEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHH LTESVDKVPYLIPADVSATVSDMGSLLTAVTLSGVLDYYSVGTKIIKAPKKMVEQQILMT HHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQTMASLVETSGVNGLLKALNPELLTKTASSMHLLEKQKDLDAALDILKSLDGELKHASE HHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC NAEIKPTTLVAAQSLVKELETLIGGAAANGAIKRSTRKLFQ CCCCCHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCC >Mature Secondary Structure MKVTVYGAGNQNLYVNQLKLPESFGGTAPYGGSRMAIEFAKAGHEVILAEINKSNLNDEQ CEEEEEECCCCCEEEEEEECCHHCCCCCCCCCCEEEEEEHHCCCEEEEEEECCCCCCCHH WSIVESAGVNVVSDDIEASKNAEIAIFFTPFGKKTVEIAKKILPHLPENAIIANTCTVSP HHHHHHCCCEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCC VTLYAMLEVELRTKRKDIGITSMHPAAVPGTPQHGHYVISNKATNGTSYANDEQIQKCVR EEEEHEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHH LTESVDKVPYLIPADVSATVSDMGSLLTAVTLSGVLDYYSVGTKIIKAPKKMVEQQILMT HHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQTMASLVETSGVNGLLKALNPELLTKTASSMHLLEKQKDLDAALDILKSLDGELKHASE HHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC NAEIKPTTLVAAQSLVKELETLIGGAAANGAIKRSTRKLFQ CCCCCHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 5,10-methylenetetrahydromethanopterin; coenzyme F420
Specific reaction: 5,10-methylenetetrahydromethanopterin + coenzyme F420 = 5,10-methenyltetrahydromethanopterin + reduced coenzyme F420
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]