| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399754
Identifier: 150399754
GI number: 150399754
Start: 1022179
End: 1022637
Strand: Reverse
Name: 150399754
Synonym: Mevan_1006
Alternate gene names: NA
Gene position: 1022637-1022179 (Counterclockwise)
Preceding gene: 150399755
Following gene: 150399747
Centisome position: 59.45
GC content: 34.42
Gene sequence:
>459_bases ATGTGGGAAGACTCCCCATCACACGTTTGTAGGGGTGGAGATTTACGGGGACTTGCATTTTGCTGCCCTCCTGTAAAATA CTGCCCATTACATAACGCTTTAAAGTCTTTAGAAATGACTAACGACGAATTTTCAAAAATTAAGCAGGAATTTGGAAATG AAACTCGGCTTAAATATGGTAAGAATACCTGCTTTGGAAGTCTTGTATGGTGCTGCAAAATTACAAAACCATGTCCTTTT AGAGATAGTGCAATGCTTGCAATAGAAATGGGTGAAGACGAATATATGGAACTTAAAAAAAGTTTGTCTATTGAAGTACT CAAAAAAACCAAATTTTTAAAAGAAGGCGTAAAAACACTTACTGAAAAAGGAATTCCAAAAGATATTGCAGAAAAAGCTA TTTTAGAAACGGGAGACTTAAAAAAGGCTTACGAAATTGCAAAAATAACTATTTCTTAA
Upstream 100 bases:
>100_bases GGTGCAATTTTTCTTGATAAAAATTACGGTAAAACTCTTTTAAAAAATTTAATCAATAATCACGTTGAAATAGTGAAGAA AATGAGCGAAGGTGATTCAA
Downstream 100 bases:
>100_bases TAAATTTCTTTTATTTTAGCGTTTTTAAATTCTTTCAGCATTTTAAATTCATTTTCCGTTATTTCATATATTTTAAATTC AGTATTATTTAATATACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MWEDSPSHVCRGGDLRGLAFCCPPVKYCPLHNALKSLEMTNDEFSKIKQEFGNETRLKYGKNTCFGSLVWCCKITKPCPF RDSAMLAIEMGEDEYMELKKSLSIEVLKKTKFLKEGVKTLTEKGIPKDIAEKAILETGDLKKAYEIAKITIS
Sequences:
>Translated_152_residues MWEDSPSHVCRGGDLRGLAFCCPPVKYCPLHNALKSLEMTNDEFSKIKQEFGNETRLKYGKNTCFGSLVWCCKITKPCPF RDSAMLAIEMGEDEYMELKKSLSIEVLKKTKFLKEGVKTLTEKGIPKDIAEKAILETGDLKKAYEIAKITIS >Mature_152_residues MWEDSPSHVCRGGDLRGLAFCCPPVKYCPLHNALKSLEMTNDEFSKIKQEFGNETRLKYGKNTCFGSLVWCCKITKPCPF RDSAMLAIEMGEDEYMELKKSLSIEVLKKTKFLKEGVKTLTEKGIPKDIAEKAILETGDLKKAYEIAKITIS
Specific function: Unknown
COG id: COG4008
COG function: function code K; Predicted metal-binding transcription factor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017671 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17162; Mature: 17162
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWEDSPSHVCRGGDLRGLAFCCPPVKYCPLHNALKSLEMTNDEFSKIKQEFGNETRLKYG CCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCEECCC KNTCFGSLVWCCKITKPCPFRDSAMLAIEMGEDEYMELKKSLSIEVLKKTKFLKEGVKTL CCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEKGIPKDIAEKAILETGDLKKAYEIAKITIS HHCCCCHHHHHHHHHCCCCCHHHHHHEEEEEC >Mature Secondary Structure MWEDSPSHVCRGGDLRGLAFCCPPVKYCPLHNALKSLEMTNDEFSKIKQEFGNETRLKYG CCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCEECCC KNTCFGSLVWCCKITKPCPFRDSAMLAIEMGEDEYMELKKSLSIEVLKKTKFLKEGVKTL CCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEKGIPKDIAEKAILETGDLKKAYEIAKITIS HHCCCCHHHHHHHHHCCCCCHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]