Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399725

Identifier: 150399725

GI number: 150399725

Start: 993575

End: 994411

Strand: Reverse

Name: 150399725

Synonym: Mevan_0977

Alternate gene names: NA

Gene position: 994411-993575 (Counterclockwise)

Preceding gene: 150399727

Following gene: 150399713

Centisome position: 57.81

GC content: 27.6

Gene sequence:

>837_bases
ATGGATTTAAAGGCGTACTTTGAACTTATCCGGTTAAAAAATTGTTTAACGGCAGGCTTTGGAGCGTTAATTTCAGGATT
AATTGCATCTAACTTTACATTTGGTGCATTATTTCCACTGATTTTGGCATTTTTAGTCGTATTTTTTATATGTGGCTTTG
GAAATTCTTTAAATGACATATATGATTTAAAAATAGATCGGATAAATAAGCCGTTTAGGCCCATACCTTCAAAAAGGATT
AGTTTAACTGATGCAAAAGTATTTTCATATTCGATAATGATATTCGGGCTTATAATATCTCTTTTTAATATATATTGTTT
TTTAATGGCGGTATTAAATGCTGTAGTTTTACAAAAATACGCAAAAATTTATAAAAAAAATAAAATTATCGGAAACATGC
TTGTTGCATATCTTACAGGTTCAGTATTTATATTTGGGGGAATTGCGGTAGGAAATGTTAATGTATCCTTATATTTATTT
TCATGTGCCATGTTTTCAATGTGGGCAAGAGAAATAATAAAAGACTATGAGGATATAGAAGGTGATTTAAAAGAAAAAGT
AAGTTCACTACCAATAAAATACGGTGAAAAGTCAATTTATATTTCTTTAGGGTTACTCCTTATTGCAATAGGTTTAAGCT
TTTTACCCTATTTAACAGGAATTTTTGGAATTTATTACCTTTTAATGATTTTAATATGTAATTTAATGTTTTTAGCTGGG
TTTTTTAATCTTTTAAACGCACCTTCAAAAAAACAAGCAAGAAAAACTTCAAAAAATATAAAATTGATAACAAACTTTGT
TTTGATTGCGTTTATTATCGGCTCGATTTTTAAATAA

Upstream 100 bases:

>100_bases
ATCGGTATTCCTGCGGTTCCAAAGTATAGCATGTTATCACATATTTTAACTATCAGCTTTTTATCTTAGTTTTAAACTAT
ATATCGTTTGGGTGAATTAC

Downstream 100 bases:

>100_bases
CTTTAAATTAATAACTTTAAATCAAGTACTTTTTTTAAAAGGTATTTTAGATTAAGATTTTAACAAATCCATACTAAACC
ATACTAAATTAGATTGGTAA

Product: (S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase

Products: NA

Alternate protein names: DGGGP synthase; DGGGPS; (S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase; Geranylgeranylglycerol-phosphate geranylgeranyltransferase

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MDLKAYFELIRLKNCLTAGFGALISGLIASNFTFGALFPLILAFLVVFFICGFGNSLNDIYDLKIDRINKPFRPIPSKRI
SLTDAKVFSYSIMIFGLIISLFNIYCFLMAVLNAVVLQKYAKIYKKNKIIGNMLVAYLTGSVFIFGGIAVGNVNVSLYLF
SCAMFSMWAREIIKDYEDIEGDLKEKVSSLPIKYGEKSIYISLGLLLIAIGLSFLPYLTGIFGIYYLLMILICNLMFLAG
FFNLLNAPSKKQARKTSKNIKLITNFVLIAFIIGSIFK

Sequences:

>Translated_278_residues
MDLKAYFELIRLKNCLTAGFGALISGLIASNFTFGALFPLILAFLVVFFICGFGNSLNDIYDLKIDRINKPFRPIPSKRI
SLTDAKVFSYSIMIFGLIISLFNIYCFLMAVLNAVVLQKYAKIYKKNKIIGNMLVAYLTGSVFIFGGIAVGNVNVSLYLF
SCAMFSMWAREIIKDYEDIEGDLKEKVSSLPIKYGEKSIYISLGLLLIAIGLSFLPYLTGIFGIYYLLMILICNLMFLAG
FFNLLNAPSKKQARKTSKNIKLITNFVLIAFIIGSIFK
>Mature_278_residues
MDLKAYFELIRLKNCLTAGFGALISGLIASNFTFGALFPLILAFLVVFFICGFGNSLNDIYDLKIDRINKPFRPIPSKRI
SLTDAKVFSYSIMIFGLIISLFNIYCFLMAVLNAVVLQKYAKIYKKNKIIGNMLVAYLTGSVFIFGGIAVGNVNVSLYLF
SCAMFSMWAREIIKDYEDIEGDLKEKVSSLPIKYGEKSIYISLGLLLIAIGLSFLPYLTGIFGIYYLLMILICNLMFLAG
FFNLLNAPSKKQARKTSKNIKLITNFVLIAFIIGSIFK

Specific function: Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesi

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiA prenyltransferase family. DGGGP synthase subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DGGGP_METVS (A6UQV8)

Other databases:

- EMBL:   CP000742
- RefSeq:   YP_001323492.1
- STRING:   A6UQV8
- GeneID:   5325844
- GenomeReviews:   CP000742_GR
- KEGG:   mvn:Mevan_0977
- eggNOG:   arNOG05783
- HOGENOM:   HBG667825
- OMA:   NAIGKSD
- ProtClustDB:   PRK09573
- HAMAP:   MF_01286
- InterPro:   IPR000537

Pfam domain/function: PF01040 UbiA

EC number: =2.5.1.42

Molecular weight: Translated: 31151; Mature: 31151

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x17efda30)-; HASH(0x17bb8888)-; HASH(0x18649308)-; HASH(0x162fd87c)-; HASH(0x18129108)-; HASH(0x163429ac)-; HASH(0x1813777c)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure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HHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA