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The map label for this gene is 150399699

Identifier: 150399699

GI number: 150399699

Start: 966420

End: 966899

Strand: Reverse

Name: 150399699

Synonym: Mevan_0951

Alternate gene names: NA

Gene position: 966899-966420 (Counterclockwise)

Preceding gene: 150399702

Following gene: 150399694

Centisome position: 56.21

GC content: 34.38

Gene sequence:

>480_bases
ATGCAATGTGAACTCTGCGGGAAAGAGGTTAAGGATATCTTTAAAACAAGGATAGAAGGAGTAGATATGAATGTTTGCGA
AACTTGTGCAAAGTTTGGAATTACTCCAAAAGGATATTCTAGAATGCCAAAGGCAGTATTCAATGTCACTTCGGACAAAA
AAGAAAAAACTTCAAAGAAGCCTAAAAAAGACATGTTTGATAGCTTAAAAACGATTGTCGAGGACTACGGCACATTAATA
AGGGAAGCAAGGGAAAAAAGAAATATGACGCTAGAAGGCCTTGCAAGAACAGCCGGCATTAAAGAATCACTCCTTCACAA
AATCGAAAGAAATGAAATTGAACCGGAAGAAAAATACGTTAATATTCTTGAAAGAGAGCTTAAAATATCACTTTACGAAG
AAGGAACTTATAATTACGAATCAAAAGATGAAAATGCTGATTTTACACTTGGGGACTTTGTAAAAATCAAAAAAAGGTAA

Upstream 100 bases:

>100_bases
GAAATGAGATTGTCTAATGAAGCATTTGCGAATCTAATGCTACAGAATCTCGATAAATAGGCTAAAAATATCTTTAAATT
TAATATACTAAGGTGTATGT

Downstream 100 bases:

>100_bases
TTAATTTTAAATGTAATTAATTTATTGAAGTTCCTTTTACATTTTTTAAAAGGGCATTATATATATTTCTTTTTTTACTT
CCATTAAAAATTATGGTTTT

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MQCELCGKEVKDIFKTRIEGVDMNVCETCAKFGITPKGYSRMPKAVFNVTSDKKEKTSKKPKKDMFDSLKTIVEDYGTLI
REAREKRNMTLEGLARTAGIKESLLHKIERNEIEPEEKYVNILERELKISLYEEGTYNYESKDENADFTLGDFVKIKKR

Sequences:

>Translated_159_residues
MQCELCGKEVKDIFKTRIEGVDMNVCETCAKFGITPKGYSRMPKAVFNVTSDKKEKTSKKPKKDMFDSLKTIVEDYGTLI
REAREKRNMTLEGLARTAGIKESLLHKIERNEIEPEEKYVNILERELKISLYEEGTYNYESKDENADFTLGDFVKIKKR
>Mature_159_residues
MQCELCGKEVKDIFKTRIEGVDMNVCETCAKFGITPKGYSRMPKAVFNVTSDKKEKTSKKPKKDMFDSLKTIVEDYGTLI
REAREKRNMTLEGLARTAGIKESLLHKIERNEIEPEEKYVNILERELKISLYEEGTYNYESKDENADFTLGDFVKIKKR

Specific function: Unknown

COG id: COG1813

COG function: function code K; Predicted transcription factor, homolog of eukaryotic MBF1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004451
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 18446; Mature: 18446

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCELCGKEVKDIFKTRIEGVDMNVCETCAKFGITPKGYSRMPKAVFNVTSDKKEKTSKK
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHCC
PKKDMFDSLKTIVEDYGTLIREAREKRNMTLEGLARTAGIKESLLHKIERNEIEPEEKYV
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHH
NILERELKISLYEEGTYNYESKDENADFTLGDFVKIKKR
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MQCELCGKEVKDIFKTRIEGVDMNVCETCAKFGITPKGYSRMPKAVFNVTSDKKEKTSKK
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHCC
PKKDMFDSLKTIVEDYGTLIREAREKRNMTLEGLARTAGIKESLLHKIERNEIEPEEKYV
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHH
NILERELKISLYEEGTYNYESKDENADFTLGDFVKIKKR
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]