| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399684
Identifier: 150399684
GI number: 150399684
Start: 951920
End: 952684
Strand: Reverse
Name: 150399684
Synonym: Mevan_0935
Alternate gene names: NA
Gene position: 952684-951920 (Counterclockwise)
Preceding gene: 150399685
Following gene: 150399683
Centisome position: 55.39
GC content: 33.07
Gene sequence:
>765_bases ATGACACAAAAACGAGAAATTGCAGTAGCATTGTCATTTGTATTTTTTGGATCTGCAATAATTTATTCACTACTTAATAT AAACGTGGTGGGGGGAGTAAATTATATCTACACTCAAAATTACGTGGTTCCAAACTTGGTTACAGCAGTACTTTTTGATT GGAGGGCATTTGACACTCTTGGAGAATGTATGATATTAGTAACTTCAGTTTTAGTTACAGGAATGGTTTTTGGAAGGGGG TTATTTGGGTTTGAATTTTTAAAAGACACTTACGAAAAAGAGCAAGTTAAAACTACGGATACTGAAGATGAATTTACATC ATTAGTAAAAGTACTTGCAATGCCTTTTAGCATAATACTGATGGCTCTTGGAATTTCAATTATTCTTGGTGGACATATAA CTCCAGGCGGAGGATTTCAAGGTGGTTCATTGATTGCAGCATCTTATATACTTAGTATCGTTGCATTTGGGTGCAAATCT CCAATTAAATTTAAACACCATTTTTTAGAAAAACTTGAATCTTTTGGGGCATTACTATTTATGTCACTTGGATTTTTAGG AATTTTGGCTTCAGGATATTATCTTTTAAACTTAACCAGTTTTTCAGGATATCCTTTGTTTTTTGGGCCTTTAGGGCTTG AAAATACGGGAATAATTCCTTATTTAAATATTGCAGTAGGTTTAAAAGTTTTAGCGGGCCTTTCAACAATTACATTCCTA TTAACCGGTGAAAAAGTAGTTAAAGACTATATTATCGGTAAGTAG
Upstream 100 bases:
>100_bases AAAAGAAAATTCAAACGATATAGGTAACCAGATGTTTTGGCTTTCGATGTTTTCTGGAATTTTGGCAATGGTTATTTATT TTGCTCGATAAGGTGATAAA
Downstream 100 bases:
>100_bases TCGGTGATAACATGTATAATATCATATTAAACGAATTTATGACTTTAAACTTGAATTTTGTTGCAGTTATTGGAATATTA CTTGGATTGGTACTTGGAAT
Product: putative monovalent cation/H+ antiporter subunit B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTQKREIAVALSFVFFGSAIIYSLLNINVVGGVNYIYTQNYVVPNLVTAVLFDWRAFDTLGECMILVTSVLVTGMVFGRG LFGFEFLKDTYEKEQVKTTDTEDEFTSLVKVLAMPFSIILMALGISIILGGHITPGGGFQGGSLIAASYILSIVAFGCKS PIKFKHHFLEKLESFGALLFMSLGFLGILASGYYLLNLTSFSGYPLFFGPLGLENTGIIPYLNIAVGLKVLAGLSTITFL LTGEKVVKDYIIGK
Sequences:
>Translated_254_residues MTQKREIAVALSFVFFGSAIIYSLLNINVVGGVNYIYTQNYVVPNLVTAVLFDWRAFDTLGECMILVTSVLVTGMVFGRG LFGFEFLKDTYEKEQVKTTDTEDEFTSLVKVLAMPFSIILMALGISIILGGHITPGGGFQGGSLIAASYILSIVAFGCKS PIKFKHHFLEKLESFGALLFMSLGFLGILASGYYLLNLTSFSGYPLFFGPLGLENTGIIPYLNIAVGLKVLAGLSTITFL LTGEKVVKDYIIGK >Mature_253_residues TQKREIAVALSFVFFGSAIIYSLLNINVVGGVNYIYTQNYVVPNLVTAVLFDWRAFDTLGECMILVTSVLVTGMVFGRGL FGFEFLKDTYEKEQVKTTDTEDEFTSLVKVLAMPFSIILMALGISIILGGHITPGGGFQGGSLIAASYILSIVAFGCKSP IKFKHHFLEKLESFGALLFMSLGFLGILASGYYLLNLTSFSGYPLFFGPLGLENTGIIPYLNIAVGLKVLAGLSTITFLL TGEKVVKDYIIGK
Specific function: Unknown
COG id: COG2111
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhB subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007182 [H]
Pfam domain/function: PF04039 MnhB [H]
EC number: NA
Molecular weight: Translated: 27600; Mature: 27469
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKREIAVALSFVFFGSAIIYSLLNINVVGGVNYIYTQNYVVPNLVTAVLFDWRAFDTL CCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCCHHHHHHHHHHHHHHHHHH GECMILVTSVLVTGMVFGRGLFGFEFLKDTYEKEQVKTTDTEDEFTSLVKVLAMPFSIIL HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH MALGISIILGGHITPGGGFQGGSLIAASYILSIVAFGCKSPIKFKHHFLEKLESFGALLF HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH MSLGFLGILASGYYLLNLTSFSGYPLFFGPLGLENTGIIPYLNIAVGLKVLAGLSTITFL HHHHHHHHHHCCEEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LTGEKVVKDYIIGK HCCHHHHHHHHCCC >Mature Secondary Structure TQKREIAVALSFVFFGSAIIYSLLNINVVGGVNYIYTQNYVVPNLVTAVLFDWRAFDTL CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCCHHHHHHHHHHHHHHHHHH GECMILVTSVLVTGMVFGRGLFGFEFLKDTYEKEQVKTTDTEDEFTSLVKVLAMPFSIIL HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH MALGISIILGGHITPGGGFQGGSLIAASYILSIVAFGCKSPIKFKHHFLEKLESFGALLF HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH MSLGFLGILASGYYLLNLTSFSGYPLFFGPLGLENTGIIPYLNIAVGLKVLAGLSTITFL HHHHHHHHHHCCEEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LTGEKVVKDYIIGK HCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]