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The map label for this gene is ygfT [C]

Identifier: 150399562

GI number: 150399562

Start: 843070

End: 843492

Strand: Reverse

Name: ygfT [C]

Synonym: Mevan_0811

Alternate gene names: 150399562

Gene position: 843492-843070 (Counterclockwise)

Preceding gene: 150399563

Following gene: 150399560

Centisome position: 49.04

GC content: 35.22

Gene sequence:

>423_bases
ATGAAAGTAATACCAAATATCGGGCTTTGTGTAAGCTGTGGAAAATGCGAAAGAATATGCCCTTTAAATGCAATCCATGT
TTTTGATGGAATCCCTTTAAGGTGTATGCACTGTGAAGATGCCCCATGTATTTTTGCATGCCCAAAAGATGCGATAACAA
AAATCGATGATAAAGTGGTGTTAAACCCTGAAAAATGTATAGGCTGTGCATTATGTATTGAAGCGTGCCCTGTCGGTGCA
ATTGATATGAATCGATGTTCAAATACTGTAGTAAAGTGTGACGGTTGCATAAATTTAGGTTCTGAACTTTGTGTGGACAC
TTGTCCTACAAAAGCACTTGATTATTATGAAAATACTCTTGAAGCAAAGAGATCAGAATTAATTTCAAAACTTAAGAAAA
TAAGTCCAAGAAAAAAGAAGTAA

Upstream 100 bases:

>100_bases
TAGCCGTAGTTGGGTCGAAATCAAAACCTAAAAAGAAAGGACTTCTCTCTTTAATTACTGCATCTTCACGATGCAACCCT
TAATTTAATCTGGTGAAGTT

Downstream 100 bases:

>100_bases
TAAATTTTTACTTTACCAAAAACCACACCAATATTTAATTTTTTTATTTAATTGGAATTAATGTAACATCAACTTTTTTG
TTTTCAATCTTAAGCTTCAT

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKVIPNIGLCVSCGKCERICPLNAIHVFDGIPLRCMHCEDAPCIFACPKDAITKIDDKVVLNPEKCIGCALCIEACPVGA
IDMNRCSNTVVKCDGCINLGSELCVDTCPTKALDYYENTLEAKRSELISKLKKISPRKKK

Sequences:

>Translated_140_residues
MKVIPNIGLCVSCGKCERICPLNAIHVFDGIPLRCMHCEDAPCIFACPKDAITKIDDKVVLNPEKCIGCALCIEACPVGA
IDMNRCSNTVVKCDGCINLGSELCVDTCPTKALDYYENTLEAKRSELISKLKKISPRKKK
>Mature_140_residues
MKVIPNIGLCVSCGKCERICPLNAIHVFDGIPLRCMHCEDAPCIFACPKDAITKIDDKVVLNPEKCIGCALCIEACPVGA
IDMNRCSNTVVKCDGCINLGSELCVDTCPTKALDYYENTLEAKRSELISKLKKISPRKKK

Specific function: Unknown

COG id: COG1142

COG function: function code C; Fe-S-cluster-containing hydrogenase components 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI87082180, Length=125, Percent_Identity=37.6, Blast_Score=79, Evalue=1e-16,
Organism=Escherichia coli, GI1788811, Length=87, Percent_Identity=41.3793103448276, Blast_Score=76, Evalue=8e-16,
Organism=Escherichia coli, GI1787122, Length=90, Percent_Identity=41.1111111111111, Blast_Score=70, Evalue=5e-14,
Organism=Escherichia coli, GI87082179, Length=150, Percent_Identity=34.6666666666667, Blast_Score=69, Evalue=1e-13,
Organism=Escherichia coli, GI1789079, Length=187, Percent_Identity=31.5508021390374, Blast_Score=69, Evalue=1e-13,
Organism=Escherichia coli, GI1787872, Length=90, Percent_Identity=38.8888888888889, Blast_Score=65, Evalue=1e-12,
Organism=Escherichia coli, GI2367245, Length=83, Percent_Identity=42.1686746987952, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI87082114, Length=77, Percent_Identity=41.5584415584416, Blast_Score=64, Evalue=5e-12,
Organism=Escherichia coli, GI1790326, Length=105, Percent_Identity=38.0952380952381, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI1787749, Length=87, Percent_Identity=42.5287356321839, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI2367345, Length=115, Percent_Identity=38.2608695652174, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 15293; Mature: 15293

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

12.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
14.3 %Cys+Met (Translated Protein)
12.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
14.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIPNIGLCVSCGKCERICPLNAIHVFDGIPLRCMHCEDAPCIFACPKDAITKIDDKVV
CCCCCCCCEEEECCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEECCHHHHHHCCCEEE
LNPEKCIGCALCIEACPVGAIDMNRCSNTVVKCDGCINLGSELCVDTCPTKALDYYENTL
ECHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCCCHHHHHCCCCCHHHHHHHHHH
EAKRSELISKLKKISPRKKK
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKVIPNIGLCVSCGKCERICPLNAIHVFDGIPLRCMHCEDAPCIFACPKDAITKIDDKVV
CCCCCCCCEEEECCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEECCHHHHHHCCCEEE
LNPEKCIGCALCIEACPVGAIDMNRCSNTVVKCDGCINLGSELCVDTCPTKALDYYENTL
ECHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCCCHHHHHCCCCCHHHHHHHHHH
EAKRSELISKLKKISPRKKK
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]