| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399508
Identifier: 150399508
GI number: 150399508
Start: 798195
End: 798782
Strand: Reverse
Name: 150399508
Synonym: Mevan_0757
Alternate gene names: NA
Gene position: 798782-798195 (Counterclockwise)
Preceding gene: 150399530
Following gene: 150399502
Centisome position: 46.44
GC content: 31.12
Gene sequence:
>588_bases ATGGAAAATATGGTGAATTTAATTGATTGCCCAATATGTGGGAAGGAAGAGTCATTAAAAATAGTAACACAGGAACTTGA AATACCGTATTTTGGAAAAGTGATTGAAACAACAATTTTTTGTGAAGCTTGTAAATATAAAAAAAGTGATATATTCCCAT CAGAAGTTAAAGAACCTAAACGGTATATATTGCCAGTTTTAGAAGAATATGATTTAAATAAACGGGTTATAAGGGGCTCT TCAGGACATGTAAAAATACCTGAATTGGGCTTTGAAATGTCACCTGGGCCTGCATCTGAAGCTTACGTTTCAAACGTTGA AGGGGTCATAATAAGAATGGAAGAGGCACTTATTACACTTATTAGCTGGCTTGAAACTGAAGAAGAAAAAAAACGGGCAA AAACGTTAATAGAAAAACTTGAAAATGTAAAACTTGGAAAAGAAAAAATAACTTTAATAATTGAAGATCCACTTGGACAT AGTGCAATAATTGGAGACAATGTAAAAGAAGAATTATTAACAACTGAAGAAATAGAAGTCCTTTCAGGAAACGTTGTTAT AATTGATTCTTCAAATTCTTTAATTTAA
Upstream 100 bases:
>100_bases AGTCGAAAATTAAGATATGTATAAATTTTTTTATGTTATGAGAACATAGTCTTTTACTTAGGTAAGTAGCATTTTCAAAA TTTGATTAAGGTGATTTTTT
Downstream 100 bases:
>100_bases AAAAAACTATTCATTAAATTTAAAACCGCATACTTTACAAAAATTTTTAAGGATTAGTTCGCCATGTTCAGTATGCGAAA CTTCAGGGTGAAATTGCACC
Product: ZPR1-like zinc finger protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MENMVNLIDCPICGKEESLKIVTQELEIPYFGKVIETTIFCEACKYKKSDIFPSEVKEPKRYILPVLEEYDLNKRVIRGS SGHVKIPELGFEMSPGPASEAYVSNVEGVIIRMEEALITLISWLETEEEKKRAKTLIEKLENVKLGKEKITLIIEDPLGH SAIIGDNVKEELLTTEEIEVLSGNVVIIDSSNSLI
Sequences:
>Translated_195_residues MENMVNLIDCPICGKEESLKIVTQELEIPYFGKVIETTIFCEACKYKKSDIFPSEVKEPKRYILPVLEEYDLNKRVIRGS SGHVKIPELGFEMSPGPASEAYVSNVEGVIIRMEEALITLISWLETEEEKKRAKTLIEKLENVKLGKEKITLIIEDPLGH SAIIGDNVKEELLTTEEIEVLSGNVVIIDSSNSLI >Mature_195_residues MENMVNLIDCPICGKEESLKIVTQELEIPYFGKVIETTIFCEACKYKKSDIFPSEVKEPKRYILPVLEEYDLNKRVIRGS SGHVKIPELGFEMSPGPASEAYVSNVEGVIIRMEEALITLISWLETEEEKKRAKTLIEKLENVKLGKEKITLIIEDPLGH SAIIGDNVKEELLTTEEIEVLSGNVVIIDSSNSLI
Specific function: Unknown
COG id: COG1779
COG function: function code R; C4-type Zn-finger protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZPR1 family [H]
Homologues:
Organism=Homo sapiens, GI4508021, Length=148, Percent_Identity=31.0810810810811, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004457 - InterPro: IPR004470 [H]
Pfam domain/function: PF03367 zf-ZPR1 [H]
EC number: NA
Molecular weight: Translated: 21924; Mature: 21924
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENMVNLIDCPICGKEESLKIVTQELEIPYFGKVIETTIFCEACKYKKSDIFPSEVKEPK CCCCCCHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCH RYILPVLEEYDLNKRVIRGSSGHVKIPELGFEMSPGPASEAYVSNVEGVIIRMEEALITL HHHHHHHHHCCCCCCEEECCCCCEECCCCCCCCCCCCCCHHHHHCCCEEEEEHHHHHHHH ISWLETEEEKKRAKTLIEKLENVKLGKEKITLIIEDPLGHSAIIGDNVKEELLTTEEIEV HHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEECCCHHHHHHHHHHHHE LSGNVVIIDSSNSLI EECCEEEEECCCCCC >Mature Secondary Structure MENMVNLIDCPICGKEESLKIVTQELEIPYFGKVIETTIFCEACKYKKSDIFPSEVKEPK CCCCCCHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCH RYILPVLEEYDLNKRVIRGSSGHVKIPELGFEMSPGPASEAYVSNVEGVIIRMEEALITL HHHHHHHHHCCCCCCEEECCCCCEECCCCCCCCCCCCCCHHHHHCCCEEEEEHHHHHHHH ISWLETEEEKKRAKTLIEKLENVKLGKEKITLIIEDPLGHSAIIGDNVKEELLTTEEIEV HHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEECCCHHHHHHHHHHHHE LSGNVVIIDSSNSLI EECCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]