| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is yleA [C]
Identifier: 150399412
GI number: 150399412
Start: 710343
End: 711659
Strand: Reverse
Name: yleA [C]
Synonym: Mevan_0661
Alternate gene names: 150399412
Gene position: 711659-710343 (Counterclockwise)
Preceding gene: 150399413
Following gene: 150399411
Centisome position: 41.37
GC content: 30.9
Gene sequence:
>1317_bases ATGAAAGTTATAATATATTCAAAGGACATATATTCTTACGGTGCAATGCTTATTTCAGGAATTTTAAAGGAAAAACACAA CTACGATGTAAAACTTGTTCGAAATTTATCTGAAAACAATCTTTTTTTAAATTCTGATGTTGTTATATTTAGCCTTTATT CAACATTGAATATTTTGGACGAAAACATAAAAAATACGATAGAATTAATAAAAAAGTCTGGAAAAACTAGGGTTTATGTT GCAGGGCCAGTTTCTGCTTATCCTGAGATTATATTAAATGAATTAAACTTAGATGGCGTAATTTTAGGGGAAGGTGAACT TACAACCCCTGAAATTATTTTAGGAGGTAAAAATGGCCTTGCGTATTTTAAAAACGATGAAATTATCAAAAATAATGTAG AAAAAAAGCCAGAACTCGATTTTTCAAAAATATATATTCCAAAAGATATTGAAAAACAGACAGTAAGAGGGGCAAATATC TATATGGAAACGCATAGGGGATGTCTTGGACACTGCACGTTTTGTCAGGTTCCTGAATTTTTTGGGCGAGATATAAGAAG TAAACCTTTAGAATTAATATTAAATGAAGTAAAAGCACTTAAAAGACGAGGGGTAAATAGAATTGCAATAAGTGGGGGCA CTGGAAGCCTTTATAATTTTAAAAATTCTTTAAATCGGGATAATTTTATAGAAATGGTAAAATCGGTTTCAGAAATTATT GGAAAAGAAAATTTATCCATTCCAGATATGAGGGTAGATTATATCGATGAAGAAATACTTTGTGCAATCAGGGATTATTC AATAGGATGGGTTTTTTATGGGATTGAGAGTGGGAGTAACGAACTCCTTAAAAAAATGAAAAAAGGAACAAATACTGCCA AAAACTTAAGAGCAATAAAAACTGCAAAAGAATGTGGAGTAAAAGTTGCAGGAAGCTTTATTGTTGGCCATCCTGATGAA TCAGAGTATGATTACCTACTTACTAAGGATTTTATCGTAGATGCGGAGCTTGATGATATATTTATAAGTGCTGCAGAACC AATTCCTGGAACTGAATTATGTAAAACTGTTTTGAATACTAAATATGAAGAAAATCCAACATTTATGGTACACAGTGGAC AATATCGAAAATATGGTTTAAAAGAAAATGAAGCAAGAGCTTATGACTTAATGATGCACTCAGAAATGTGGAAATCAAAC CAAAAAGTAATCACTAAAAATCTTGCAAAAGTATACCTTGAAGAAGCAAAAATGCAAGGGGCGGATATTCGAAAAGTTAC CGAATTACTATTTAAATACCGGAATTTTATAATTTAA
Upstream 100 bases:
>100_bases ACAATTATTATGATGATGGTGCAGATGCGATATTAATGATAAAACGAAGGTCAGATTTAGTTGGTAATTACCCTATTTTT GTAAACATGTGGTAGATACT
Downstream 100 bases:
>100_bases ACGAGGGAGATTATGATTAGAACTGATATGGAACTTAAAGAACTTACGAATGAAATATGCGAATTTATCCGTGAACAAGT TGAAAATGCAAATGCAAAAG
Product: radical SAM domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MKVIIYSKDIYSYGAMLISGILKEKHNYDVKLVRNLSENNLFLNSDVVIFSLYSTLNILDENIKNTIELIKKSGKTRVYV AGPVSAYPEIILNELNLDGVILGEGELTTPEIILGGKNGLAYFKNDEIIKNNVEKKPELDFSKIYIPKDIEKQTVRGANI YMETHRGCLGHCTFCQVPEFFGRDIRSKPLELILNEVKALKRRGVNRIAISGGTGSLYNFKNSLNRDNFIEMVKSVSEII GKENLSIPDMRVDYIDEEILCAIRDYSIGWVFYGIESGSNELLKKMKKGTNTAKNLRAIKTAKECGVKVAGSFIVGHPDE SEYDYLLTKDFIVDAELDDIFISAAEPIPGTELCKTVLNTKYEENPTFMVHSGQYRKYGLKENEARAYDLMMHSEMWKSN QKVITKNLAKVYLEEAKMQGADIRKVTELLFKYRNFII
Sequences:
>Translated_438_residues MKVIIYSKDIYSYGAMLISGILKEKHNYDVKLVRNLSENNLFLNSDVVIFSLYSTLNILDENIKNTIELIKKSGKTRVYV AGPVSAYPEIILNELNLDGVILGEGELTTPEIILGGKNGLAYFKNDEIIKNNVEKKPELDFSKIYIPKDIEKQTVRGANI YMETHRGCLGHCTFCQVPEFFGRDIRSKPLELILNEVKALKRRGVNRIAISGGTGSLYNFKNSLNRDNFIEMVKSVSEII GKENLSIPDMRVDYIDEEILCAIRDYSIGWVFYGIESGSNELLKKMKKGTNTAKNLRAIKTAKECGVKVAGSFIVGHPDE SEYDYLLTKDFIVDAELDDIFISAAEPIPGTELCKTVLNTKYEENPTFMVHSGQYRKYGLKENEARAYDLMMHSEMWKSN QKVITKNLAKVYLEEAKMQGADIRKVTELLFKYRNFII >Mature_438_residues MKVIIYSKDIYSYGAMLISGILKEKHNYDVKLVRNLSENNLFLNSDVVIFSLYSTLNILDENIKNTIELIKKSGKTRVYV AGPVSAYPEIILNELNLDGVILGEGELTTPEIILGGKNGLAYFKNDEIIKNNVEKKPELDFSKIYIPKDIEKQTVRGANI YMETHRGCLGHCTFCQVPEFFGRDIRSKPLELILNEVKALKRRGVNRIAISGGTGSLYNFKNSLNRDNFIEMVKSVSEII GKENLSIPDMRVDYIDEEILCAIRDYSIGWVFYGIESGSNELLKKMKKGTNTAKNLRAIKTAKECGVKVAGSFIVGHPDE SEYDYLLTKDFIVDAELDDIFISAAEPIPGTELCKTVLNTKYEENPTFMVHSGQYRKYGLKENEARAYDLMMHSEMWKSN QKVITKNLAKVYLEEAKMQGADIRKVTELLFKYRNFII
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylthiotransferase family [H]
Homologues:
Organism=Escherichia coli, GI1786882, Length=239, Percent_Identity=24.6861924686192, Blast_Score=69, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR020612 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 49782; Mature: 49782
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS01278 UPF0004
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVIIYSKDIYSYGAMLISGILKEKHNYDVKLVRNLSENNLFLNSDVVIFSLYSTLNILD CEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEECCEEEEEHHHHHHHHH ENIKNTIELIKKSGKTRVYVAGPVSAYPEIILNELNLDGVILGEGELTTPEIILGGKNGL HHHHHHHHHHHHCCCEEEEEECCHHHCHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCC AYFKNDEIIKNNVEKKPELDFSKIYIPKDIEKQTVRGANIYMETHRGCLGHCTFCQVPEF EEECCCHHHHCCCCCCCCCCCEEEECCCCCHHHHCCCCEEEEECCCCCCCCCHHCCCHHH FGRDIRSKPLELILNEVKALKRRGVNRIAISGGTGSLYNFKNSLNRDNFIEMVKSVSEII HCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHH GKENLSIPDMRVDYIDEEILCAIRDYSIGWVFYGIESGSNELLKKMKKGTNTAKNLRAIK CCCCCCCCCCCHHHCCHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHCCCHHHHHHHHH TAKECGVKVAGSFIVGHPDESEYDYLLTKDFIVDAELDDIFISAAEPIPGTELCKTVLNT HHHHCCCEEECEEEEECCCCCCCCEEEEECEEEECCCCCEEEECCCCCCHHHHHHHHHCC KYEENPTFMVHSGQYRKYGLKENEARAYDLMMHSEMWKSNQKVITKNLAKVYLEEAKMQG CCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC ADIRKVTELLFKYRNFII CHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVIIYSKDIYSYGAMLISGILKEKHNYDVKLVRNLSENNLFLNSDVVIFSLYSTLNILD CEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEECCEEEEEHHHHHHHHH ENIKNTIELIKKSGKTRVYVAGPVSAYPEIILNELNLDGVILGEGELTTPEIILGGKNGL HHHHHHHHHHHHCCCEEEEEECCHHHCHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCC AYFKNDEIIKNNVEKKPELDFSKIYIPKDIEKQTVRGANIYMETHRGCLGHCTFCQVPEF EEECCCHHHHCCCCCCCCCCCEEEECCCCCHHHHCCCCEEEEECCCCCCCCCHHCCCHHH FGRDIRSKPLELILNEVKALKRRGVNRIAISGGTGSLYNFKNSLNRDNFIEMVKSVSEII HCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHH GKENLSIPDMRVDYIDEEILCAIRDYSIGWVFYGIESGSNELLKKMKKGTNTAKNLRAIK CCCCCCCCCCCHHHCCHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHCCCHHHHHHHHH TAKECGVKVAGSFIVGHPDESEYDYLLTKDFIVDAELDDIFISAAEPIPGTELCKTVLNT HHHHCCCEEECEEEEECCCCCCCCEEEEECEEEECCCCCEEEECCCCCCHHHHHHHHHCC KYEENPTFMVHSGQYRKYGLKENEARAYDLMMHSEMWKSNQKVITKNLAKVYLEEAKMQG CCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC ADIRKVTELLFKYRNFII CHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]