| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is resE [H]
Identifier: 150399364
GI number: 150399364
Start: 668571
End: 670496
Strand: Reverse
Name: resE [H]
Synonym: Mevan_0613
Alternate gene names: 150399364
Gene position: 670496-668571 (Counterclockwise)
Preceding gene: 150399365
Following gene: 150399363
Centisome position: 38.98
GC content: 32.71
Gene sequence:
>1926_bases ATGAAAACTATACCTCCAATTAAAAGATTAGGGACTAAATTGATGATGTATTCCATAATTGTCGCATTAATCCCCATAGT AATGCTTGGTGCAGTTTCAATAAACACCATAACAAATGAAATGAATAACCAAGCTCAGGATAAGATAAATAACGATTTAA AAATTGCAGAAAGTATATTGGGACTTAAATTAGAAAAATTATCATCACTAAATACCTATGTTGCAACAAGCAATTGTATT ATGGACTCAATTGTAAATACTGATTACGGGAGCCTTAAAAATCTAGCAACTGCAACAAAAATATCTTCAGAAGCTGACTT TGTAGTACTTTTAGATAAGAATGGAAATGTTATTGCAAGGTCTAACTCCAACGTTACTGGGGATGATAGCTATTCTGAAT TATTTTTTAAAGCAGTATCTTATGACGACTTTTCTTTTATTGAAATTTTAGATCTTGAAACTCTAAAATATGAAGACGTT GAGGATATTGTACAGATTGAGATTAAAAGTGACATTTCTAATGAAACATTAATTAAAAATAGGGCAATGGCCTTAGTTTC AATAAAACCAGTTTATGGAACACTTGGGGAGTTATTGGGTGCTTCGATGGCTGTTGATATATTAAATAATGATTATGAAA TAGTGGATATCGTAAGAAACTCGTCTGGAGATGCAACTACAATATTTTTAGACAGTATTCGTATATCTACAAACGTTTTG GATGGCGATGAAAGAGCGATTGGAACTCCAGTTTCAAACGATGTATATACTAAAGTTGTGGAAGAAGGTGGAACGTACTA CGGTAGAGCTTATGTTGTAAATGAATGGTATTTTACAGCATATGAGCCAATATATGACTCAGATGAAAAAATTATTGGCA TATTATTTGTCGGAACTCCTGAAAATAAGTACTTTACTCTTCTTTCAAATATAAGGGATCAAACATTTGTAGTTGGATTA ATTGGTCTATTAATTGCACTTACTGTTTCCTTACTACTTAATAGAATCATAATAAAACCTCTTGATGAACTAAAGCACGG GGTACAGTGGATAAGTGGTGGAGATTATACTAAAAAAGTTAATGTAACGACTGACGATGAATTTGGAATGCTTGCAAGAG TTTTTAATGAAATGGCAGACCAAATAAACAGTTCAAATGAAAAACTTAAAAAACACGCAGAAGAATTAAAAGAGTCATAT GAGGAACTAAAAGAGCTTGATAATTTAAAATCAGACCTTATTGCAATAGTTTCTCATGAACTTAGAACTCCGTTAACTTC AATTAAAGGATATGTTGAACTCGTACTTGACGGAACAATGGGTACAATCAACGAATCTCAAAGAAAATGCCTTCAGGTTG CAGATGACAATATAATAAGACTTAGGCGACTTATTGAAAGTATGCTTGATTTATCAAAAATAGAGCGTGGAGAACTTGAG ATGTACCGGGAGGCTATGAATGTTAAAGATACTGTAAGTGACGTTATTGAGTATTTAACACCGCTTGCAACGGAAAAAAA CATTAAATTAAAACAAGACATTAAAGATTTACTAATAAATGCTGATAAAGATAGAATAACACAAGTTTTTACAAATTTAA TTGAAAATGCGATAAAATTCAGCCCTGCAAATGAATCCATAATGATAATCGGAAAAGAAACTGAAAATGGGGATGTACAC ATAACAGTTAAGGATAATGGTGCAGGAATTCCAAAAAAAGACTTGGAAAAAATATTTGACCAGTTTTACCAGGTTGATTC CTCAACAAAGCGTAAAAAAGGAGGTTCTGGACTCGGTCTTGCAGTTTGTAAGAGTATTATTCAAGCCCATGGCGGAACCA TATGGGTTGAAAGTGAACTTGGACGTGGTAGCACGTTTCATATAGTACTTCCTGCATTAATCTATGAAGAGAGCATAGTA GAATAA
Upstream 100 bases:
>100_bases GTTTGACAGGGATGATTTACTTTTAAAGGTCAAAGCAATACTTTCAAATCAGAATTAAATTATTTTTTAGACTTTGGGTG TTACTAATAAAGGAGAAAAT
Downstream 100 bases:
>100_bases AAATAATATCTACATATTTACTTTTTTAATTTCAAAAAAAATGTTAATTAAGATTCATATTTTAATTTAATTGTTTTTAT CGATTTAATTTAAAAAATAA
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 641; Mature: 641
Protein sequence:
>641_residues MKTIPPIKRLGTKLMMYSIIVALIPIVMLGAVSINTITNEMNNQAQDKINNDLKIAESILGLKLEKLSSLNTYVATSNCI MDSIVNTDYGSLKNLATATKISSEADFVVLLDKNGNVIARSNSNVTGDDSYSELFFKAVSYDDFSFIEILDLETLKYEDV EDIVQIEIKSDISNETLIKNRAMALVSIKPVYGTLGELLGASMAVDILNNDYEIVDIVRNSSGDATTIFLDSIRISTNVL DGDERAIGTPVSNDVYTKVVEEGGTYYGRAYVVNEWYFTAYEPIYDSDEKIIGILFVGTPENKYFTLLSNIRDQTFVVGL IGLLIALTVSLLLNRIIIKPLDELKHGVQWISGGDYTKKVNVTTDDEFGMLARVFNEMADQINSSNEKLKKHAEELKESY EELKELDNLKSDLIAIVSHELRTPLTSIKGYVELVLDGTMGTINESQRKCLQVADDNIIRLRRLIESMLDLSKIERGELE MYREAMNVKDTVSDVIEYLTPLATEKNIKLKQDIKDLLINADKDRITQVFTNLIENAIKFSPANESIMIIGKETENGDVH ITVKDNGAGIPKKDLEKIFDQFYQVDSSTKRKKGGSGLGLAVCKSIIQAHGGTIWVESELGRGSTFHIVLPALIYEESIV E
Sequences:
>Translated_641_residues MKTIPPIKRLGTKLMMYSIIVALIPIVMLGAVSINTITNEMNNQAQDKINNDLKIAESILGLKLEKLSSLNTYVATSNCI MDSIVNTDYGSLKNLATATKISSEADFVVLLDKNGNVIARSNSNVTGDDSYSELFFKAVSYDDFSFIEILDLETLKYEDV EDIVQIEIKSDISNETLIKNRAMALVSIKPVYGTLGELLGASMAVDILNNDYEIVDIVRNSSGDATTIFLDSIRISTNVL DGDERAIGTPVSNDVYTKVVEEGGTYYGRAYVVNEWYFTAYEPIYDSDEKIIGILFVGTPENKYFTLLSNIRDQTFVVGL IGLLIALTVSLLLNRIIIKPLDELKHGVQWISGGDYTKKVNVTTDDEFGMLARVFNEMADQINSSNEKLKKHAEELKESY EELKELDNLKSDLIAIVSHELRTPLTSIKGYVELVLDGTMGTINESQRKCLQVADDNIIRLRRLIESMLDLSKIERGELE MYREAMNVKDTVSDVIEYLTPLATEKNIKLKQDIKDLLINADKDRITQVFTNLIENAIKFSPANESIMIIGKETENGDVH ITVKDNGAGIPKKDLEKIFDQFYQVDSSTKRKKGGSGLGLAVCKSIIQAHGGTIWVESELGRGSTFHIVLPALIYEESIV E >Mature_641_residues MKTIPPIKRLGTKLMMYSIIVALIPIVMLGAVSINTITNEMNNQAQDKINNDLKIAESILGLKLEKLSSLNTYVATSNCI MDSIVNTDYGSLKNLATATKISSEADFVVLLDKNGNVIARSNSNVTGDDSYSELFFKAVSYDDFSFIEILDLETLKYEDV EDIVQIEIKSDISNETLIKNRAMALVSIKPVYGTLGELLGASMAVDILNNDYEIVDIVRNSSGDATTIFLDSIRISTNVL DGDERAIGTPVSNDVYTKVVEEGGTYYGRAYVVNEWYFTAYEPIYDSDEKIIGILFVGTPENKYFTLLSNIRDQTFVVGL IGLLIALTVSLLLNRIIIKPLDELKHGVQWISGGDYTKKVNVTTDDEFGMLARVFNEMADQINSSNEKLKKHAEELKESY EELKELDNLKSDLIAIVSHELRTPLTSIKGYVELVLDGTMGTINESQRKCLQVADDNIIRLRRLIESMLDLSKIERGELE MYREAMNVKDTVSDVIEYLTPLATEKNIKLKQDIKDLLINADKDRITQVFTNLIENAIKFSPANESIMIIGKETENGDVH ITVKDNGAGIPKKDLEKIFDQFYQVDSSTKRKKGGSGLGLAVCKSIIQAHGGTIWVESELGRGSTFHIVLPALIYEESIV E
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=439, Percent_Identity=28.9293849658314, Blast_Score=145, Evalue=9e-36, Organism=Escherichia coli, GI1788393, Length=281, Percent_Identity=28.1138790035587, Blast_Score=135, Evalue=8e-33, Organism=Escherichia coli, GI145693157, Length=245, Percent_Identity=32.6530612244898, Blast_Score=127, Evalue=3e-30, Organism=Escherichia coli, GI1786783, Length=235, Percent_Identity=30.6382978723404, Blast_Score=125, Evalue=7e-30, Organism=Escherichia coli, GI1786600, Length=231, Percent_Identity=29.8701298701299, Blast_Score=125, Evalue=7e-30, Organism=Escherichia coli, GI1786912, Length=248, Percent_Identity=30.241935483871, Blast_Score=120, Evalue=3e-28, Organism=Escherichia coli, GI87081816, Length=336, Percent_Identity=28.2738095238095, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI48994928, Length=243, Percent_Identity=31.6872427983539, Blast_Score=114, Evalue=3e-26, Organism=Escherichia coli, GI1788549, Length=303, Percent_Identity=28.3828382838284, Blast_Score=112, Evalue=7e-26, Organism=Escherichia coli, GI1788713, Length=234, Percent_Identity=31.6239316239316, Blast_Score=112, Evalue=8e-26, Organism=Escherichia coli, GI1790436, Length=235, Percent_Identity=33.1914893617021, Blast_Score=109, Evalue=7e-25, Organism=Escherichia coli, GI1787894, Length=318, Percent_Identity=26.1006289308176, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1788279, Length=326, Percent_Identity=25.1533742331288, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI87082128, Length=323, Percent_Identity=23.8390092879257, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1790861, Length=391, Percent_Identity=25.8312020460358, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1790346, Length=283, Percent_Identity=24.7349823321555, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI1790551, Length=293, Percent_Identity=23.5494880546075, Blast_Score=73, Evalue=7e-14, Organism=Escherichia coli, GI1789808, Length=302, Percent_Identity=25.1655629139073, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790300, Length=276, Percent_Identity=25, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1789403, Length=303, Percent_Identity=24.7524752475248, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=85, Percent_Identity=37.6470588235294, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 71383; Mature: 71383
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIPPIKRLGTKLMMYSIIVALIPIVMLGAVSINTITNEMNNQAQDKINNDLKIAESIL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH GLKLEKLSSLNTYVATSNCIMDSIVNTDYGSLKNLATATKISSEADFVVLLDKNGNVIAR HHHHHHHHCCHHHHEEHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE SNSNVTGDDSYSELFFKAVSYDDFSFIEILDLETLKYEDVEDIVQIEIKSDISNETLIKN CCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHEEEECCCCCCCHHHHH RAMALVSIKPVYGTLGELLGASMAVDILNNDYEIVDIVRNSSGDATTIFLDSIRISTNVL CCEEEEEECHHHHHHHHHHCHHHEEHHHCCCCEEEEEEECCCCCEEEEEEEEEEEEEEEE DGDERAIGTPVSNDVYTKVVEEGGTYYGRAYVVNEWYFTAYEPIYDSDEKIIGILFVGTP CCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEEEEEEECCCCCCCCCEEEEEEEECC ENKYFTLLSNIRDQTFVVGLIGLLIALTVSLLLNRIIIKPLDELKHGVQWISGGDYTKKV CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCEEEE NVTTDDEFGMLARVFNEMADQINSSNEKLKKHAEELKESYEELKELDNLKSDLIAIVSHE EECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRTPLTSIKGYVELVLDGTMGTINESQRKCLQVADDNIIRLRRLIESMLDLSKIERGELE HHCCHHHHHHHEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHH MYREAMNVKDTVSDVIEYLTPLATEKNIKLKQDIKDLLINADKDRITQVFTNLIENAIKF HHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC SPANESIMIIGKETENGDVHITVKDNGAGIPKKDLEKIFDQFYQVDSSTKRKKGGSGLGL CCCCCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCHH AVCKSIIQAHGGTIWVESELGRGSTFHIVLPALIYEESIVE HHHHHHHHHCCCEEEEECCCCCCCEEEEEHHHHHHHHHHCC >Mature Secondary Structure MKTIPPIKRLGTKLMMYSIIVALIPIVMLGAVSINTITNEMNNQAQDKINNDLKIAESIL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH GLKLEKLSSLNTYVATSNCIMDSIVNTDYGSLKNLATATKISSEADFVVLLDKNGNVIAR HHHHHHHHCCHHHHEEHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE SNSNVTGDDSYSELFFKAVSYDDFSFIEILDLETLKYEDVEDIVQIEIKSDISNETLIKN CCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHEEEECCCCCCCHHHHH RAMALVSIKPVYGTLGELLGASMAVDILNNDYEIVDIVRNSSGDATTIFLDSIRISTNVL CCEEEEEECHHHHHHHHHHCHHHEEHHHCCCCEEEEEEECCCCCEEEEEEEEEEEEEEEE DGDERAIGTPVSNDVYTKVVEEGGTYYGRAYVVNEWYFTAYEPIYDSDEKIIGILFVGTP CCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEEEEEEECCCCCCCCCEEEEEEEECC ENKYFTLLSNIRDQTFVVGLIGLLIALTVSLLLNRIIIKPLDELKHGVQWISGGDYTKKV CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCEEEE NVTTDDEFGMLARVFNEMADQINSSNEKLKKHAEELKESYEELKELDNLKSDLIAIVSHE EECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRTPLTSIKGYVELVLDGTMGTINESQRKCLQVADDNIIRLRRLIESMLDLSKIERGELE HHCCHHHHHHHEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHH MYREAMNVKDTVSDVIEYLTPLATEKNIKLKQDIKDLLINADKDRITQVFTNLIENAIKF HHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC SPANESIMIIGKETENGDVHITVKDNGAGIPKKDLEKIFDQFYQVDSSTKRKKGGSGLGL CCCCCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCHH AVCKSIIQAHGGTIWVESELGRGSTFHIVLPALIYEESIVE HHHHHHHHHCCCEEEEECCCCCCCEEEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]