| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399338
Identifier: 150399338
GI number: 150399338
Start: 640019
End: 640573
Strand: Reverse
Name: 150399338
Synonym: Mevan_0587
Alternate gene names: NA
Gene position: 640573-640019 (Counterclockwise)
Preceding gene: 150399339
Following gene: 150399337
Centisome position: 37.24
GC content: 33.51
Gene sequence:
>555_bases ATGCAAGAAAAAATGAAAGAAATTGCGGCAAGAATTCGTGAATTAAGAACTCTTTCAAAAGTATCAATTCAAGAAATGTC AGATTACTTAAAGACTTCCCCTGAAATTTATGAGCAGTATGAGAGGGGAACTTGTGATATTTCTGCAAGCGTTTTACTTG AAATTGCACACCGTTTTGACGTTGACATGGGGTTATTATTAACTGGTGAAGAAACAAGAATGCATGTATTTACTGTAACA AGAAAAGGAAAGGGAATATCTGTTGAAAGAAGAAAGCAGTACAAATACGAAAATTTAGCTGAAAAATTCATCCATAAAAA GGCAGAACCTTTTATTGTGACGGTTGAGCCAAAAACTGACGGAAAAAAACCTTCAAAAAATTCGCACCCTGGCCAAGAAT TTAACTATATTCTTGAAGGCTCTATAAAGCTTTATATCCATAATAATGAAGTTATTTTGGAAGAAGGCGATTCAATATTC TTTGATTCGAACTATGAGCATGCAATGGAAGCTTTAAATGGAAAAGCTGCGAAATTTCTCGCAATTATAATGTAA
Upstream 100 bases:
>100_bases ATAAATGCTTAACTTTAAGGTTTCAGTAATAATTATCAAACCAAAATTATGGTTTATTAACCCTGATTATGATATTTAAC TTAATTTAAAGGTTGAGATC
Downstream 100 bases:
>100_bases TTATGTAAAATTTATTTCGAAAACAAAAAACGGGTAAGATTATGGTGTCCTTACTGGAAAAATTTGTTAAAAAAGTAGAA TTCAAGTCATACGAGGATTT
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; Cupin 2 Domain-Containing Protein; Transcriptional Regulator MerR Family; HTH-Type Transcriptional Regulator; MerR Family Transcriptional Regulator; Phosphate Butyryltransferase; Cupin Domain-Containing Protein; Transcriptional Regulator With Cupin Domain; Epoxidase; Cupin 2 Barrel Domain-Containing Protein; Helix-Turn-Helix Domain-Containing Protein; Regulatory Protein; Helix-Turn-Helix Domain Protein; Cro/CI Family Transcriptional Regulator; Helix-Turn-Helix Family Protein; Cupin Sensor Transcriptional Regulator; Transcription Regulator; Transcriptional Regulator XRE Family With Cupin Sensor; Phosphotransbutyrylase
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MQEKMKEIAARIRELRTLSKVSIQEMSDYLKTSPEIYEQYERGTCDISASVLLEIAHRFDVDMGLLLTGEETRMHVFTVT RKGKGISVERRKQYKYENLAEKFIHKKAEPFIVTVEPKTDGKKPSKNSHPGQEFNYILEGSIKLYIHNNEVILEEGDSIF FDSNYEHAMEALNGKAAKFLAIIM
Sequences:
>Translated_184_residues MQEKMKEIAARIRELRTLSKVSIQEMSDYLKTSPEIYEQYERGTCDISASVLLEIAHRFDVDMGLLLTGEETRMHVFTVT RKGKGISVERRKQYKYENLAEKFIHKKAEPFIVTVEPKTDGKKPSKNSHPGQEFNYILEGSIKLYIHNNEVILEEGDSIF FDSNYEHAMEALNGKAAKFLAIIM >Mature_184_residues MQEKMKEIAARIRELRTLSKVSIQEMSDYLKTSPEIYEQYERGTCDISASVLLEIAHRFDVDMGLLLTGEETRMHVFTVT RKGKGISVERRKQYKYENLAEKFIHKKAEPFIVTVEPKTDGKKPSKNSHPGQEFNYILEGSIKLYIHNNEVILEEGDSIF FDSNYEHAMEALNGKAAKFLAIIM
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21224; Mature: 21224
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEKMKEIAARIRELRTLSKVSIQEMSDYLKTSPEIYEQYERGTCDISASVLLEIAHRFD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHCC VDMGLLLTGEETRMHVFTVTRKGKGISVERRKQYKYENLAEKFIHKKAEPFIVTVEPKTD CCCEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC GKKPSKNSHPGQEFNYILEGSIKLYIHNNEVILEEGDSIFFDSNYEHAMEALNGKAAKFL CCCCCCCCCCCCCEEEEEECEEEEEEECCEEEEECCCEEEECCCHHHHHHHHCCCHHHEE AIIM EEEC >Mature Secondary Structure MQEKMKEIAARIRELRTLSKVSIQEMSDYLKTSPEIYEQYERGTCDISASVLLEIAHRFD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHCC VDMGLLLTGEETRMHVFTVTRKGKGISVERRKQYKYENLAEKFIHKKAEPFIVTVEPKTD CCCEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC GKKPSKNSHPGQEFNYILEGSIKLYIHNNEVILEEGDSIFFDSNYEHAMEALNGKAAKFL CCCCCCCCCCCCCEEEEEECEEEEEEECCEEEEECCCEEEECCCHHHHHHHHCCCHHHEE AIIM EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA