| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
Click here to switch to the map view.
The map label for this gene is hpsA [H]
Identifier: 150399334
GI number: 150399334
Start: 634067
End: 635380
Strand: Reverse
Name: hpsA [H]
Synonym: Mevan_0582
Alternate gene names: 150399334
Gene position: 635380-634067 (Counterclockwise)
Preceding gene: 150399335
Following gene: 150399332
Centisome position: 36.94
GC content: 37.37
Gene sequence:
>1314_bases ATGGAAAACTATGACATACCTCCAGTTCAAGTTGCCCTTGACCTTTTAGACCTTCCAAGAGCAATAGAAATTGCAAAAGA GGCGGTTTTAGGCGGGGTAACATGGATTGAAGCGGGAACTCCCCTCATAAAATCCGAAGGAATGAATGCAATCCGTAAAT TAAGGGAAAATTTTCCAAATTTAACGATTGTAGCAGATATGAAAACAATGGATGCAGGAAGTACTGAAGTTGAAATGGCT GCAAAAGCTGGAGCAGACGTTATATTGATACTTGGGGTAGGCCCTGATTCAATGATAAAAGAAGCAGTGCTTGCAGGAAA AAAATACGGAGTATTGGTTGGAACTGACTTAATAGCTACATATGACCCTGTAGAACGTGCTTATGAACTTGAAAAACTGG GTGTTGATATTATAAACATACACGTTGGACTTGACCAACAAGTTTTAAACATTGACCCTGTAGAACTCGTTAAAAAAGTT TCAGAAAGATGTAAACACGCAAAAATTGCAGCAGCAGGTGGATTAAATAGTGAAACTGCTGTAAAAGCTTATGAAGCTGG AGCAGATATAATAATTGTGGGCGGGCCACTTTATAAATCAGAAAGTCCTGAAAAAACTGCAAGGGACATTATTACAAGTT TAAAGACTGGAAAACCAATATCAACCAGCAAATTTAAGAAATTTAATGAAAAAGAATTGTTAGATGCTTTTAAAATTGTC AGCACTTCCAATATAAGCGATGCAATGCACAGAACTGGTGAAATGAGGGGATTAAAACCCGTAGTGGATTTTAAAAAACC TTTGAAGTTTGCAGGGCCCGCGGTTACTGTTAGAACGTATGCAGGCGATTGGAGTAAACCTGTAAGTGCAATAGACGTAT GCAGTGCCGGTGACGTTTTAGTAATTGATAATTGCGGTTCTGAAATTTCTTGCTGGGGCGGACTTGCAACACTTTCGTGC AAAACAAAAGGTATAGTTGCAGTTATAGTAGATGGGGCTGTAAGGGACGTAGAAGAAATTTTAAAAATTGGAATTCCTGT TTTTTCAAAAAGTATAACTCCAACAGCAGGTGAACCAAAAGGCTTTGGTGAAATAAATTCAGCAATTTTGTGTGCTGGAA GAACTGTTGAACCTGGTGATTGGATTATTGGTGACGAAAATGGAATTATAGTAGTTCCAAAAAAAGATGCAATGGAAATT GCAAATCGTGCAATAGATGTAAAAGAACGTGAAGATAGGGTTAAAGAAGAAATAAATCGTGGAAACACACTTGGAAAAGT TATACGACTTAAAGATTGGGAATTAAAAAAATAA
Upstream 100 bases:
>100_bases CATTTAATTGACTACAATGTATTTTTAAATAATTTTTTTAGTTTTTATATTTTATTTTAACTGCCAATTTAATTACTTTT TATTTTAAAAAGGTGATATT
Downstream 100 bases:
>100_bases TATATCCCTTTTTTAAAATCTTTTAAAAAATAAAATTGTTATTTTGAACATATATTACTTTTAATAATATTAAGCTTAAT TATATTATTTTTTATACCTG
Product: bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
Products: NA
Alternate protein names: HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase [H]
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MENYDIPPVQVALDLLDLPRAIEIAKEAVLGGVTWIEAGTPLIKSEGMNAIRKLRENFPNLTIVADMKTMDAGSTEVEMA AKAGADVILILGVGPDSMIKEAVLAGKKYGVLVGTDLIATYDPVERAYELEKLGVDIINIHVGLDQQVLNIDPVELVKKV SERCKHAKIAAAGGLNSETAVKAYEAGADIIIVGGPLYKSESPEKTARDIITSLKTGKPISTSKFKKFNEKELLDAFKIV STSNISDAMHRTGEMRGLKPVVDFKKPLKFAGPAVTVRTYAGDWSKPVSAIDVCSAGDVLVIDNCGSEISCWGGLATLSC KTKGIVAVIVDGAVRDVEEILKIGIPVFSKSITPTAGEPKGFGEINSAILCAGRTVEPGDWIIGDENGIIVVPKKDAMEI ANRAIDVKEREDRVKEEINRGNTLGKVIRLKDWELKK
Sequences:
>Translated_437_residues MENYDIPPVQVALDLLDLPRAIEIAKEAVLGGVTWIEAGTPLIKSEGMNAIRKLRENFPNLTIVADMKTMDAGSTEVEMA AKAGADVILILGVGPDSMIKEAVLAGKKYGVLVGTDLIATYDPVERAYELEKLGVDIINIHVGLDQQVLNIDPVELVKKV SERCKHAKIAAAGGLNSETAVKAYEAGADIIIVGGPLYKSESPEKTARDIITSLKTGKPISTSKFKKFNEKELLDAFKIV STSNISDAMHRTGEMRGLKPVVDFKKPLKFAGPAVTVRTYAGDWSKPVSAIDVCSAGDVLVIDNCGSEISCWGGLATLSC KTKGIVAVIVDGAVRDVEEILKIGIPVFSKSITPTAGEPKGFGEINSAILCAGRTVEPGDWIIGDENGIIVVPKKDAMEI ANRAIDVKEREDRVKEEINRGNTLGKVIRLKDWELKK >Mature_437_residues MENYDIPPVQVALDLLDLPRAIEIAKEAVLGGVTWIEAGTPLIKSEGMNAIRKLRENFPNLTIVADMKTMDAGSTEVEMA AKAGADVILILGVGPDSMIKEAVLAGKKYGVLVGTDLIATYDPVERAYELEKLGVDIINIHVGLDQQVLNIDPVELVKKV SERCKHAKIAAAGGLNSETAVKAYEAGADIIIVGGPLYKSESPEKTARDIITSLKTGKPISTSKFKKFNEKELLDAFKIV STSNISDAMHRTGEMRGLKPVVDFKKPLKFAGPAVTVRTYAGDWSKPVSAIDVCSAGDVLVIDNCGSEISCWGGLATLSC KTKGIVAVIVDGAVRDVEEILKIGIPVFSKSITPTAGEPKGFGEINSAILCAGRTVEPGDWIIGDENGIIVVPKKDAMEI ANRAIDVKEREDRVKEEINRGNTLGKVIRLKDWELKK
Specific function: Catalyzes the condensation of ribulose 5-phosphate with formaldehyde to form 3-hexulose 6-phosphate [H]
COG id: COG0684
COG function: function code H; Demethylmenaquinone methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HPS/KGPDC family. HPS subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790006, Length=144, Percent_Identity=31.25, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR017120 - InterPro: IPR001754 - InterPro: IPR011060 - InterPro: IPR005493 [H]
Pfam domain/function: PF03737 Methyltransf_6; PF00215 OMPdecase [H]
EC number: =4.1.2.43 [H]
Molecular weight: Translated: 46944; Mature: 46944
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENYDIPPVQVALDLLDLPRAIEIAKEAVLGGVTWIEAGTPLIKSEGMNAIRKLRENFPN CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCHHHCCHHHHHHHHHHCCC LTIVADMKTMDAGSTEVEMAAKAGADVILILGVGPDSMIKEAVLAGKKYGVLVGTDLIAT EEEEEECEECCCCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEECCHHCC YDPVERAYELEKLGVDIINIHVGLDQQVLNIDPVELVKKVSERCKHAKIAAAGGLNSETA CCHHHHHHHHHHCCCEEEEEEECCCCCEECCCHHHHHHHHHHHHHHCEEEECCCCCCCHH VKAYEAGADIIIVGGPLYKSESPEKTARDIITSLKTGKPISTSKFKKFNEKELLDAFKIV HHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHH STSNISDAMHRTGEMRGLKPVVDFKKPLKFAGPAVTVRTYAGDWSKPVSAIDVCSAGDVL CCCCHHHHHHHHCCCCCCCHHHHHHCCHHHCCCEEEEEEECCCCCCCCHHHHHCCCCCEE VIDNCGSEISCWGGLATLSCKTKGIVAVIVDGAVRDVEEILKIGIPVFSKSITPTAGEPK EEECCCCCEEECCCEEEEEECCCCEEEEEECCHHHHHHHHHHCCCHHHCCCCCCCCCCCC GFGEINSAILCAGRTVEPGDWIIGDENGIIVVPKKDAMEIANRAIDVKEREDRVKEEINR CCCCCCCEEEECCCCCCCCCEEEECCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHC GNTLGKVIRLKDWELKK CCCHHHEEEECCCCCCC >Mature Secondary Structure MENYDIPPVQVALDLLDLPRAIEIAKEAVLGGVTWIEAGTPLIKSEGMNAIRKLRENFPN CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCHHHCCHHHHHHHHHHCCC LTIVADMKTMDAGSTEVEMAAKAGADVILILGVGPDSMIKEAVLAGKKYGVLVGTDLIAT EEEEEECEECCCCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEECCHHCC YDPVERAYELEKLGVDIINIHVGLDQQVLNIDPVELVKKVSERCKHAKIAAAGGLNSETA CCHHHHHHHHHHCCCEEEEEEECCCCCEECCCHHHHHHHHHHHHHHCEEEECCCCCCCHH VKAYEAGADIIIVGGPLYKSESPEKTARDIITSLKTGKPISTSKFKKFNEKELLDAFKIV HHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHH STSNISDAMHRTGEMRGLKPVVDFKKPLKFAGPAVTVRTYAGDWSKPVSAIDVCSAGDVL CCCCHHHHHHHHCCCCCCCHHHHHHCCHHHCCCEEEEEEECCCCCCCCHHHHHCCCCCEE VIDNCGSEISCWGGLATLSCKTKGIVAVIVDGAVRDVEEILKIGIPVFSKSITPTAGEPK EEECCCCCEEECCCEEEEEECCCCEEEEEECCHHHHHHHHHHCCCHHHCCCCCCCCCCCC GFGEINSAILCAGRTVEPGDWIIGDENGIIVVPKKDAMEIANRAIDVKEREDRVKEEINR CCCCCCCEEEECCCCCCCCCEEEECCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHC GNTLGKVIRLKDWELKK CCCHHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA