| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is modD [H]
Identifier: 150399296
GI number: 150399296
Start: 599172
End: 600023
Strand: Reverse
Name: modD [H]
Synonym: Mevan_0544
Alternate gene names: 150399296
Gene position: 600023-599172 (Counterclockwise)
Preceding gene: 150399298
Following gene: 150399291
Centisome position: 34.88
GC content: 30.05
Gene sequence:
>852_bases ATGTCATTTTATATAGCTGATTCTGAATTAGAAAAAATAATTGAAGAAGACGTAAATCCATTAGATTTAACTTCACAATT AATGGACTTAAGTAGATTTAATGCAAAAATTTCATACATTGCAAGACATGACATGGTAATATGTTGTACTGAGGAATCCG CAAGAATCTGTACTACTATAGGACTAACTGTAAAAAATTATTTAAGTTCGGGAACCTTTGTAAAAAAAGGCCAGGTATTT TTTGAAGCATTTGGAAGAGCGGATAAAATCCACCTCGCATGGAAAAGTGTTTTAAGATTACTTGAGGGATATTCTGGAAT TGCTACAAAAACAAAGGAATTTGTAGATATTTCAAAAAAGTACAACAATCATGTAAATATAGTAACAACTAGAAAAAGCG CTGCTGGAACTAAAAAACTCTCAATAAAGGCAGTAATTTCAGGAGGTGCTTATCCTCATAGGATGGGGCTATCAGAGACA GTTCTGATTTTTAATGAACACCTTATATTTTTAAAAGATGATTCAGAACTCCAAAACACTTTGGAAATAATGAAATCAAA AGTTCTTGAAAAGAAAATAGGAATAGAAACAGATAATCATGAAATTGGGTTGAAATATGTTAAAATGGGTTTTGATTTTA TTCAACTTGATAAATTAAGTCCAAAAGAGGTAGAAAACTTTATTAAAGATGCTAAATCAGTAAACCAGAAAATAACTGTG GCTTGTGCAGGTGGAATTAATATTGAAAATATTGAAGAATATGCAAAAACAGGTGTTGACGTTATAGTTACTTCATCGCT TTATTTTACAAAGCCTGCGGATATAAAAGCATTAATTGAAAAAATAGATTAA
Upstream 100 bases:
>100_bases GTAACCTATAAAAAATGCCATTATTTGAAATTTAAATGGCAAATAATATATGTTAAAATAAATATTTAGATTAATAAATT ATAATAATTTGAGGGTTAAA
Downstream 100 bases:
>100_bases TATTTTTCAAATAATTTAAAAATTACTTTTTAATCTTACATATTCATTAAACGCTTCTCTGGTAGTTCCAACAACAACTC GTTTATAGCATTTTTTCCCG
Product: modD protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSFYIADSELEKIIEEDVNPLDLTSQLMDLSRFNAKISYIARHDMVICCTEESARICTTIGLTVKNYLSSGTFVKKGQVF FEAFGRADKIHLAWKSVLRLLEGYSGIATKTKEFVDISKKYNNHVNIVTTRKSAAGTKKLSIKAVISGGAYPHRMGLSET VLIFNEHLIFLKDDSELQNTLEIMKSKVLEKKIGIETDNHEIGLKYVKMGFDFIQLDKLSPKEVENFIKDAKSVNQKITV ACAGGINIENIEEYAKTGVDVIVTSSLYFTKPADIKALIEKID
Sequences:
>Translated_283_residues MSFYIADSELEKIIEEDVNPLDLTSQLMDLSRFNAKISYIARHDMVICCTEESARICTTIGLTVKNYLSSGTFVKKGQVF FEAFGRADKIHLAWKSVLRLLEGYSGIATKTKEFVDISKKYNNHVNIVTTRKSAAGTKKLSIKAVISGGAYPHRMGLSET VLIFNEHLIFLKDDSELQNTLEIMKSKVLEKKIGIETDNHEIGLKYVKMGFDFIQLDKLSPKEVENFIKDAKSVNQKITV ACAGGINIENIEEYAKTGVDVIVTSSLYFTKPADIKALIEKID >Mature_282_residues SFYIADSELEKIIEEDVNPLDLTSQLMDLSRFNAKISYIARHDMVICCTEESARICTTIGLTVKNYLSSGTFVKKGQVFF EAFGRADKIHLAWKSVLRLLEGYSGIATKTKEFVDISKKYNNHVNIVTTRKSAAGTKKLSIKAVISGGAYPHRMGLSETV LIFNEHLIFLKDDSELQNTLEIMKSKVLEKKIGIETDNHEIGLKYVKMGFDFIQLDKLSPKEVENFIKDAKSVNQKITVA CAGGINIENIEEYAKTGVDVIVTSSLYFTKPADIKALIEKID
Specific function: NAD biosynthesis; aspartate to NaMN; third (last) step. [C]
COG id: COG0157
COG function: function code H; Nicotinate-nucleotide pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadC/modD family [H]
Homologues:
Organism=Escherichia coli, GI1786299, Length=250, Percent_Identity=25.6, Blast_Score=71, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6321162, Length=271, Percent_Identity=23.9852398523985, Blast_Score=77, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006242 - InterPro: IPR002638 - InterPro: IPR022412 [H]
Pfam domain/function: PF01729 QRPTase_C; PF02749 QRPTase_N [H]
EC number: 2.4.2.-
Molecular weight: Translated: 31705; Mature: 31574
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFYIADSELEKIIEEDVNPLDLTSQLMDLSRFNAKISYIARHDMVICCTEESARICTTI CEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEECCEEEEECCCCCCEEHHH GLTVKNYLSSGTFVKKGQVFFEAFGRADKIHLAWKSVLRLLEGYSGIATKTKEFVDISKK HHHHHHHHCCCCEEECCHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH YNNHVNIVTTRKSAAGTKKLSIKAVISGGAYPHRMGLSETVLIFNEHLIFLKDDSELQNT HCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECEEEEEECCHHHHHH LEIMKSKVLEKKIGIETDNHEIGLKYVKMGFDFIQLDKLSPKEVENFIKDAKSVNQKITV HHHHHHHHHHHHHCCCCCCCHHCEEEEEECCCEEEECCCCHHHHHHHHHHHHHCCCEEEE ACAGGINIENIEEYAKTGVDVIVTSSLYFTKPADIKALIEKID EEECCCCHHHHHHHHHCCCEEEEECCEEEECCHHHHHHHHHCC >Mature Secondary Structure SFYIADSELEKIIEEDVNPLDLTSQLMDLSRFNAKISYIARHDMVICCTEESARICTTI EEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEECCEEEEECCCCCCEEHHH GLTVKNYLSSGTFVKKGQVFFEAFGRADKIHLAWKSVLRLLEGYSGIATKTKEFVDISKK HHHHHHHHCCCCEEECCHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH YNNHVNIVTTRKSAAGTKKLSIKAVISGGAYPHRMGLSETVLIFNEHLIFLKDDSELQNT HCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECEEEEEECCHHHHHH LEIMKSKVLEKKIGIETDNHEIGLKYVKMGFDFIQLDKLSPKEVENFIKDAKSVNQKITV HHHHHHHHHHHHHCCCCCCCHHCEEEEEECCCEEEECCCCHHHHHHHHHHHHHCCCEEEE ACAGGINIENIEEYAKTGVDVIVTSSLYFTKPADIKALIEKID EEECCCCHHHHHHHHHCCCEEEEECCEEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]