| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
Click here to switch to the map view.
The map label for this gene is 150399291
Identifier: 150399291
GI number: 150399291
Start: 594905
End: 596080
Strand: Reverse
Name: 150399291
Synonym: Mevan_0539
Alternate gene names: NA
Gene position: 596080-594905 (Counterclockwise)
Preceding gene: 150399296
Following gene: 150399290
Centisome position: 34.65
GC content: 31.55
Gene sequence:
>1176_bases ATGGATTTTGAAAAGTACGATATAATAATTGTTGGAGGGGGCCCAGCCGGATTTATAACTGGGGAAAATATTACGGATAA AAAAGTGCTTGTTTTAGAGGAGCATCAAGAAATTGGGGTACCACTACAATGTGCAGGACTTATAAGTGTAAATGGGGTAA AAGAACTTGGCAATCCTAAGGGTTCAGTAAATAAGGTTCGAGGAGCAAATATATTTTCAAAAAACAATGTATTTACAGTT GGAAATGAGAAAGTTAGGGCAGAAGTTTTTGAAAGAAAGGTAATGGATAAAGATATTGCAAAAAGGGCCTCAAAAAGAGT AGATGTTTTAATGAAATCGTATGGGAAAATCAAAAATTCAAACCAAAAAAGACGTAATTACATTACTAAATCTAGCCTTA AAGAAAAATTTCAAAAGCTTGAAATAATGCATCTTGGTGAAAGTTACGAAGTATGCCCTAAAATAATTATCGGTGCTGAT GGAATCCGCTCAAATATTGGAAAATCACTTCAAATGAATAAGAAAAGAGAAATAATATCCGGAATACAGATAGAATATGC AAATGCAAAAATTGATGATGATTTTGTAAATGTATTTTATGATAAAAGATATTCTGAAAGGTTTTTTACTTGGATAATTC CACTTGGAAATGATAGAGTAAGAGTTGGAACGTGTGATTCAAATAATTCTTACAAAAAATTAACGGAATTTTTAAAAAAT AACCGTATTGCAAATGAAATTTTAAAAAATGCAACTCCAATTGAATTTACGTCTGGTGCAATTCCTATAGGCTATTCAAA AACTGTAACGGATAATGTAATGCTTGTTGGGGACTCTGCAGGGCAAGTAAAACCTTTAAGTGGTGGCGGACTCTACTACG GTGCTAAATGTGGAAAAATCTGTGCAAATACTATAAATAACTATTTTAAAGGAAATTATTCGCTTGAATTCCTAAAAAGC TATGAAAAAGACTGGAAAAAGGAATTTTCAAAAGAAATCGATAAAAATCTTAAAATAAGAAGGATTTTTAACATGATTGA CGATGGCAAAATCGACAGGATTTTGGAATACGTAACTAAAAATAATCTTTTAGACATTATAAATGAAAAAGGAGATATGG ATAGCCCTTCAAGTGTAGTTTGGCCAATTTTGGAGAAGGCCGTATTTGGAAAATAA
Upstream 100 bases:
>100_bases TTTTATTAGTAATTCTTAGTTATTAATTCTTAATTAATAGTTTTTAATTAGGGCTATTTTTAAAAACTACGGTAACTTTA AAAAAATTTTCGGGAATAAG
Downstream 100 bases:
>100_bases TATGTTACTAAACTACATTTCTAAAAATTTAGCCCTTAAAGTTACAACCATTTTAAAATAATGTAGCTGATTTTAGATAA TGAGATATTTGCGGTTTTAA
Product: geranylgeranyl reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MDFEKYDIIIVGGGPAGFITGENITDKKVLVLEEHQEIGVPLQCAGLISVNGVKELGNPKGSVNKVRGANIFSKNNVFTV GNEKVRAEVFERKVMDKDIAKRASKRVDVLMKSYGKIKNSNQKRRNYITKSSLKEKFQKLEIMHLGESYEVCPKIIIGAD GIRSNIGKSLQMNKKREIISGIQIEYANAKIDDDFVNVFYDKRYSERFFTWIIPLGNDRVRVGTCDSNNSYKKLTEFLKN NRIANEILKNATPIEFTSGAIPIGYSKTVTDNVMLVGDSAGQVKPLSGGGLYYGAKCGKICANTINNYFKGNYSLEFLKS YEKDWKKEFSKEIDKNLKIRRIFNMIDDGKIDRILEYVTKNNLLDIINEKGDMDSPSSVVWPILEKAVFGK
Sequences:
>Translated_391_residues MDFEKYDIIIVGGGPAGFITGENITDKKVLVLEEHQEIGVPLQCAGLISVNGVKELGNPKGSVNKVRGANIFSKNNVFTV GNEKVRAEVFERKVMDKDIAKRASKRVDVLMKSYGKIKNSNQKRRNYITKSSLKEKFQKLEIMHLGESYEVCPKIIIGAD GIRSNIGKSLQMNKKREIISGIQIEYANAKIDDDFVNVFYDKRYSERFFTWIIPLGNDRVRVGTCDSNNSYKKLTEFLKN NRIANEILKNATPIEFTSGAIPIGYSKTVTDNVMLVGDSAGQVKPLSGGGLYYGAKCGKICANTINNYFKGNYSLEFLKS YEKDWKKEFSKEIDKNLKIRRIFNMIDDGKIDRILEYVTKNNLLDIINEKGDMDSPSSVVWPILEKAVFGK >Mature_391_residues MDFEKYDIIIVGGGPAGFITGENITDKKVLVLEEHQEIGVPLQCAGLISVNGVKELGNPKGSVNKVRGANIFSKNNVFTV GNEKVRAEVFERKVMDKDIAKRASKRVDVLMKSYGKIKNSNQKRRNYITKSSLKEKFQKLEIMHLGESYEVCPKIIIGAD GIRSNIGKSLQMNKKREIISGIQIEYANAKIDDDFVNVFYDKRYSERFFTWIIPLGNDRVRVGTCDSNNSYKKLTEFLKN NRIANEILKNATPIEFTSGAIPIGYSKTVTDNVMLVGDSAGQVKPLSGGGLYYGAKCGKICANTINNYFKGNYSLEFLKS YEKDWKKEFSKEIDKNLKIRRIFNMIDDGKIDRILEYVTKNNLLDIINEKGDMDSPSSVVWPILEKAVFGK
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011777 - InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: NA
Molecular weight: Translated: 44098; Mature: 44098
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFEKYDIIIVGGGPAGFITGENITDKKVLVLEEHQEIGVPLQCAGLISVNGVKELGNPK CCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECHHHCCCCEEEECEEEECCHHHHCCCC GSVNKVRGANIFSKNNVFTVGNEKVRAEVFERKVMDKDIAKRASKRVDVLMKSYGKIKNS CCCCCCCCCCEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NQKRRNYITKSSLKEKFQKLEIMHLGESYEVCPKIIIGADGIRSNIGKSLQMNKKREIIS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHCCCHHHCCHHHHHHC GIQIEYANAKIDDDFVNVFYDKRYSERFFTWIIPLGNDRVRVGTCDSNNSYKKLTEFLKN CCEEEECCCCCCHHHHHHHHHCHHCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHC NRIANEILKNATPIEFTSGAIPIGYSKTVTDNVMLVGDSAGQVKPLSGGGLYYGAKCGKI CCHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCEEECCHHHHH CANTINNYFKGNYSLEFLKSYEKDWKKEFSKEIDKNLKIRRIFNMIDDGKIDRILEYVTK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHH NNLLDIINEKGDMDSPSSVVWPILEKAVFGK CCHHHHHCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MDFEKYDIIIVGGGPAGFITGENITDKKVLVLEEHQEIGVPLQCAGLISVNGVKELGNPK CCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECHHHCCCCEEEECEEEECCHHHHCCCC GSVNKVRGANIFSKNNVFTVGNEKVRAEVFERKVMDKDIAKRASKRVDVLMKSYGKIKNS CCCCCCCCCCEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NQKRRNYITKSSLKEKFQKLEIMHLGESYEVCPKIIIGADGIRSNIGKSLQMNKKREIIS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHCCCHHHCCHHHHHHC GIQIEYANAKIDDDFVNVFYDKRYSERFFTWIIPLGNDRVRVGTCDSNNSYKKLTEFLKN CCEEEECCCCCCHHHHHHHHHCHHCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHC NRIANEILKNATPIEFTSGAIPIGYSKTVTDNVMLVGDSAGQVKPLSGGGLYYGAKCGKI CCHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCEEECCHHHHH CANTINNYFKGNYSLEFLKSYEKDWKKEFSKEIDKNLKIRRIFNMIDDGKIDRILEYVTK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHH NNLLDIINEKGDMDSPSSVVWPILEKAVFGK CCHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]