Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399291

Identifier: 150399291

GI number: 150399291

Start: 594905

End: 596080

Strand: Reverse

Name: 150399291

Synonym: Mevan_0539

Alternate gene names: NA

Gene position: 596080-594905 (Counterclockwise)

Preceding gene: 150399296

Following gene: 150399290

Centisome position: 34.65

GC content: 31.55

Gene sequence:

>1176_bases
ATGGATTTTGAAAAGTACGATATAATAATTGTTGGAGGGGGCCCAGCCGGATTTATAACTGGGGAAAATATTACGGATAA
AAAAGTGCTTGTTTTAGAGGAGCATCAAGAAATTGGGGTACCACTACAATGTGCAGGACTTATAAGTGTAAATGGGGTAA
AAGAACTTGGCAATCCTAAGGGTTCAGTAAATAAGGTTCGAGGAGCAAATATATTTTCAAAAAACAATGTATTTACAGTT
GGAAATGAGAAAGTTAGGGCAGAAGTTTTTGAAAGAAAGGTAATGGATAAAGATATTGCAAAAAGGGCCTCAAAAAGAGT
AGATGTTTTAATGAAATCGTATGGGAAAATCAAAAATTCAAACCAAAAAAGACGTAATTACATTACTAAATCTAGCCTTA
AAGAAAAATTTCAAAAGCTTGAAATAATGCATCTTGGTGAAAGTTACGAAGTATGCCCTAAAATAATTATCGGTGCTGAT
GGAATCCGCTCAAATATTGGAAAATCACTTCAAATGAATAAGAAAAGAGAAATAATATCCGGAATACAGATAGAATATGC
AAATGCAAAAATTGATGATGATTTTGTAAATGTATTTTATGATAAAAGATATTCTGAAAGGTTTTTTACTTGGATAATTC
CACTTGGAAATGATAGAGTAAGAGTTGGAACGTGTGATTCAAATAATTCTTACAAAAAATTAACGGAATTTTTAAAAAAT
AACCGTATTGCAAATGAAATTTTAAAAAATGCAACTCCAATTGAATTTACGTCTGGTGCAATTCCTATAGGCTATTCAAA
AACTGTAACGGATAATGTAATGCTTGTTGGGGACTCTGCAGGGCAAGTAAAACCTTTAAGTGGTGGCGGACTCTACTACG
GTGCTAAATGTGGAAAAATCTGTGCAAATACTATAAATAACTATTTTAAAGGAAATTATTCGCTTGAATTCCTAAAAAGC
TATGAAAAAGACTGGAAAAAGGAATTTTCAAAAGAAATCGATAAAAATCTTAAAATAAGAAGGATTTTTAACATGATTGA
CGATGGCAAAATCGACAGGATTTTGGAATACGTAACTAAAAATAATCTTTTAGACATTATAAATGAAAAAGGAGATATGG
ATAGCCCTTCAAGTGTAGTTTGGCCAATTTTGGAGAAGGCCGTATTTGGAAAATAA

Upstream 100 bases:

>100_bases
TTTTATTAGTAATTCTTAGTTATTAATTCTTAATTAATAGTTTTTAATTAGGGCTATTTTTAAAAACTACGGTAACTTTA
AAAAAATTTTCGGGAATAAG

Downstream 100 bases:

>100_bases
TATGTTACTAAACTACATTTCTAAAAATTTAGCCCTTAAAGTTACAACCATTTTAAAATAATGTAGCTGATTTTAGATAA
TGAGATATTTGCGGTTTTAA

Product: geranylgeranyl reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MDFEKYDIIIVGGGPAGFITGENITDKKVLVLEEHQEIGVPLQCAGLISVNGVKELGNPKGSVNKVRGANIFSKNNVFTV
GNEKVRAEVFERKVMDKDIAKRASKRVDVLMKSYGKIKNSNQKRRNYITKSSLKEKFQKLEIMHLGESYEVCPKIIIGAD
GIRSNIGKSLQMNKKREIISGIQIEYANAKIDDDFVNVFYDKRYSERFFTWIIPLGNDRVRVGTCDSNNSYKKLTEFLKN
NRIANEILKNATPIEFTSGAIPIGYSKTVTDNVMLVGDSAGQVKPLSGGGLYYGAKCGKICANTINNYFKGNYSLEFLKS
YEKDWKKEFSKEIDKNLKIRRIFNMIDDGKIDRILEYVTKNNLLDIINEKGDMDSPSSVVWPILEKAVFGK

Sequences:

>Translated_391_residues
MDFEKYDIIIVGGGPAGFITGENITDKKVLVLEEHQEIGVPLQCAGLISVNGVKELGNPKGSVNKVRGANIFSKNNVFTV
GNEKVRAEVFERKVMDKDIAKRASKRVDVLMKSYGKIKNSNQKRRNYITKSSLKEKFQKLEIMHLGESYEVCPKIIIGAD
GIRSNIGKSLQMNKKREIISGIQIEYANAKIDDDFVNVFYDKRYSERFFTWIIPLGNDRVRVGTCDSNNSYKKLTEFLKN
NRIANEILKNATPIEFTSGAIPIGYSKTVTDNVMLVGDSAGQVKPLSGGGLYYGAKCGKICANTINNYFKGNYSLEFLKS
YEKDWKKEFSKEIDKNLKIRRIFNMIDDGKIDRILEYVTKNNLLDIINEKGDMDSPSSVVWPILEKAVFGK
>Mature_391_residues
MDFEKYDIIIVGGGPAGFITGENITDKKVLVLEEHQEIGVPLQCAGLISVNGVKELGNPKGSVNKVRGANIFSKNNVFTV
GNEKVRAEVFERKVMDKDIAKRASKRVDVLMKSYGKIKNSNQKRRNYITKSSLKEKFQKLEIMHLGESYEVCPKIIIGAD
GIRSNIGKSLQMNKKREIISGIQIEYANAKIDDDFVNVFYDKRYSERFFTWIIPLGNDRVRVGTCDSNNSYKKLTEFLKN
NRIANEILKNATPIEFTSGAIPIGYSKTVTDNVMLVGDSAGQVKPLSGGGLYYGAKCGKICANTINNYFKGNYSLEFLKS
YEKDWKKEFSKEIDKNLKIRRIFNMIDDGKIDRILEYVTKNNLLDIINEKGDMDSPSSVVWPILEKAVFGK

Specific function: Unknown

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: NA

Molecular weight: Translated: 44098; Mature: 44098

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFEKYDIIIVGGGPAGFITGENITDKKVLVLEEHQEIGVPLQCAGLISVNGVKELGNPK
CCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECHHHCCCCEEEECEEEECCHHHHCCCC
GSVNKVRGANIFSKNNVFTVGNEKVRAEVFERKVMDKDIAKRASKRVDVLMKSYGKIKNS
CCCCCCCCCCEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NQKRRNYITKSSLKEKFQKLEIMHLGESYEVCPKIIIGADGIRSNIGKSLQMNKKREIIS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHCCCHHHCCHHHHHHC
GIQIEYANAKIDDDFVNVFYDKRYSERFFTWIIPLGNDRVRVGTCDSNNSYKKLTEFLKN
CCEEEECCCCCCHHHHHHHHHCHHCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHC
NRIANEILKNATPIEFTSGAIPIGYSKTVTDNVMLVGDSAGQVKPLSGGGLYYGAKCGKI
CCHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCEEECCHHHHH
CANTINNYFKGNYSLEFLKSYEKDWKKEFSKEIDKNLKIRRIFNMIDDGKIDRILEYVTK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHH
NNLLDIINEKGDMDSPSSVVWPILEKAVFGK
CCHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFEKYDIIIVGGGPAGFITGENITDKKVLVLEEHQEIGVPLQCAGLISVNGVKELGNPK
CCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECHHHCCCCEEEECEEEECCHHHHCCCC
GSVNKVRGANIFSKNNVFTVGNEKVRAEVFERKVMDKDIAKRASKRVDVLMKSYGKIKNS
CCCCCCCCCCEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NQKRRNYITKSSLKEKFQKLEIMHLGESYEVCPKIIIGADGIRSNIGKSLQMNKKREIIS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHCCCHHHCCHHHHHHC
GIQIEYANAKIDDDFVNVFYDKRYSERFFTWIIPLGNDRVRVGTCDSNNSYKKLTEFLKN
CCEEEECCCCCCHHHHHHHHHCHHCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHC
NRIANEILKNATPIEFTSGAIPIGYSKTVTDNVMLVGDSAGQVKPLSGGGLYYGAKCGKI
CCHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCEEECCHHHHH
CANTINNYFKGNYSLEFLKSYEKDWKKEFSKEIDKNLKIRRIFNMIDDGKIDRILEYVTK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHH
NNLLDIINEKGDMDSPSSVVWPILEKAVFGK
CCHHHHHCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]