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The map label for this gene is cbiD

Identifier: 150399270

GI number: 150399270

Start: 569359

End: 570468

Strand: Reverse

Name: cbiD

Synonym: Mevan_0518

Alternate gene names: 150399270

Gene position: 570468-569359 (Counterclockwise)

Preceding gene: 150399271

Following gene: 150399269

Centisome position: 33.17

GC content: 30.36

Gene sequence:

>1110_bases
ATGACTATCGATTTTCGAACAGAAACGACTTTTGGATATACAACTGGTGCATGTGCGGTTTCGGGTGCATATTCTGCACT
CTATTTTTTAAAAAATAATAAAAAGTTGGATTTTGTAGAAATTTTAAATTTGAAAAATGAAACTTTAATAATTCCAATAC
AAAATATCGAAAGAAGCGAAAATACTGCTTTTGCAACAGTTAAAAAATTTTCCGGAAAAGACATCGATATTACAAACAAC
ATGACAATTAATGTTGAAGTTACGCTTCAAAAATTGGATAATAATTCTAATTTAAAGTTAATCGAAATATTTGGCGGAAA
TGGCGTTGGCATCGTTACAAAACGAGGTCTGCAAATTGATGTGGGCGATTATGCAATAAATCCAAAACCAAGAGAAATGA
TTGAGAAAAACTTAATTTCACTTTTAAATGATGGTGAAAAGGCCGTTGTAAGAATATCTATTCCAAATGGGGATGAAATT
TCTAAAAAAACGTTAAACCCGAAATTAGGAATAATTGGGGGAATTTCAATTCTTGGTACAACAGGAATTGTAAGGCCAAT
GTCTAATGATGCATATAAAGAATCCCTTTTACCTCAAATTGATATAGCAATACAAAATGGCTTTGAAAATTTAGTGTTTG
TTCCGGGAAACATAGGTACAAAATACGCTAAATCGGTTTTAAATATTGAAGAAGACCAAATTATAGAAGTTTCAAATTTT
TGGGGTTTTATGCTTGAAAAAGCAGGAGAAAAAGGCGTTAAAGATATAACTGTTTTTGGACACGCTGGGAAAATAGTAAA
ACTTGCAGGAGGTATTTTTGATACTCACTCAAAGGTATCCGATGCAAGAAATGAAATTTTATGTGCGTATACGTCAACTC
TATGCAATAATCAAGAATTAATGAAAAAAATACTTCAATCAAATACTACTGAAGAAATAATAGAGATTTTGGCTGAGAAG
GATATTTTAAATGAAGTCTTTAACCTTATTTCAAAAAGAGTTGTTGAAAGACTTTGTTTAAGATTTCCAAATATTAAATT
TTCTTGTATTATTGTGGATATAAACGGAAAAATCCTTGGAAAATGCTTTTTAGGTGATCGATTTGATTAG

Upstream 100 bases:

>100_bases
ACTTCTGATTCAGTATACAAGTTATGACCTCTTAAAAAGTAATTATTTATATCTTGTTCTCAATTATATAATAATATTTA
ATTTAAAACTTGTGAAAACC

Downstream 100 bases:

>100_bases
GAAAGAGTATACTATTTTTGAGATAGGTATTTTTAAAAAAGAAGAAACTGAATCTTACTTGGAGATTTTTCCAGAGTTTT
TTGACGGAACTGAAGGACTA

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MTIDFRTETTFGYTTGACAVSGAYSALYFLKNNKKLDFVEILNLKNETLIIPIQNIERSENTAFATVKKFSGKDIDITNN
MTINVEVTLQKLDNNSNLKLIEIFGGNGVGIVTKRGLQIDVGDYAINPKPREMIEKNLISLLNDGEKAVVRISIPNGDEI
SKKTLNPKLGIIGGISILGTTGIVRPMSNDAYKESLLPQIDIAIQNGFENLVFVPGNIGTKYAKSVLNIEEDQIIEVSNF
WGFMLEKAGEKGVKDITVFGHAGKIVKLAGGIFDTHSKVSDARNEILCAYTSTLCNNQELMKKILQSNTTEEIIEILAEK
DILNEVFNLISKRVVERLCLRFPNIKFSCIIVDINGKILGKCFLGDRFD

Sequences:

>Translated_369_residues
MTIDFRTETTFGYTTGACAVSGAYSALYFLKNNKKLDFVEILNLKNETLIIPIQNIERSENTAFATVKKFSGKDIDITNN
MTINVEVTLQKLDNNSNLKLIEIFGGNGVGIVTKRGLQIDVGDYAINPKPREMIEKNLISLLNDGEKAVVRISIPNGDEI
SKKTLNPKLGIIGGISILGTTGIVRPMSNDAYKESLLPQIDIAIQNGFENLVFVPGNIGTKYAKSVLNIEEDQIIEVSNF
WGFMLEKAGEKGVKDITVFGHAGKIVKLAGGIFDTHSKVSDARNEILCAYTSTLCNNQELMKKILQSNTTEEIIEILAEK
DILNEVFNLISKRVVERLCLRFPNIKFSCIIVDINGKILGKCFLGDRFD
>Mature_368_residues
TIDFRTETTFGYTTGACAVSGAYSALYFLKNNKKLDFVEILNLKNETLIIPIQNIERSENTAFATVKKFSGKDIDITNNM
TINVEVTLQKLDNNSNLKLIEIFGGNGVGIVTKRGLQIDVGDYAINPKPREMIEKNLISLLNDGEKAVVRISIPNGDEIS
KKTLNPKLGIIGGISILGTTGIVRPMSNDAYKESLLPQIDIAIQNGFENLVFVPGNIGTKYAKSVLNIEEDQIIEVSNFW
GFMLEKAGEKGVKDITVFGHAGKIVKLAGGIFDTHSKVSDARNEILCAYTSTLCNNQELMKKILQSNTTEEIIEILAEKD
ILNEVFNLISKRVVERLCLRFPNIKFSCIIVDINGKILGKCFLGDRFD

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CBID_METVS (A6UPK3)

Other databases:

- EMBL:   CP000742
- RefSeq:   YP_001323037.1
- ProteinModelPortal:   A6UPK3
- SMR:   A6UPK3
- STRING:   A6UPK3
- GeneID:   5325708
- GenomeReviews:   CP000742_GR
- KEGG:   mvn:Mevan_0518
- eggNOG:   arNOG08460
- HOGENOM:   HBG705387
- OMA:   RRGWTTG
- ProtClustDB:   PRK00075
- HAMAP:   MF_00787
- InterPro:   IPR002748
- PIRSF:   PIRSF026782
- TIGRFAMs:   TIGR00312

Pfam domain/function: PF01888 CbiD; SSF111342 Cbl_biosynth_CbiD

EC number: NA

Molecular weight: Translated: 40823; Mature: 40692

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDFRTETTFGYTTGACAVSGAYSALYFLKNNKKLDFVEILNLKNETLIIPIQNIERSE
CEEEEECCCCCCCCCCCHHHHCCCEEEEEEECCCCCCHHEEECCCCCEEEEEECCCCCCC
NTAFATVKKFSGKDIDITNNMTINVEVTLQKLDNNSNLKLIEIFGGNGVGIVTKRGLQID
CCEEEEEEECCCCEEEEECCEEEEEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEE
VGDYAINPKPREMIEKNLISLLNDGEKAVVRISIPNGDEISKKTLNPKLGIIGGISILGT
ECCEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHCCCCCEEEECCCEECC
TGIVRPMSNDAYKESLLPQIDIAIQNGFENLVFVPGNIGTKYAKSVLNIEEDQIIEVSNF
CCEECCCCCCHHHHHCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCEEEEHHH
WGFMLEKAGEKGVKDITVFGHAGKIVKLAGGIFDTHSKVSDARNEILCAYTSTLCNNQEL
HHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHCCEEEEEHHHHCCCHHH
MKKILQSNTTEEIIEILAEKDILNEVFNLISKRVVERLCLRFPNIKFSCIIVDINGKILG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEE
KCFLGDRFD
EEECCCCCC
>Mature Secondary Structure 
TIDFRTETTFGYTTGACAVSGAYSALYFLKNNKKLDFVEILNLKNETLIIPIQNIERSE
EEEEECCCCCCCCCCCHHHHCCCEEEEEEECCCCCCHHEEECCCCCEEEEEECCCCCCC
NTAFATVKKFSGKDIDITNNMTINVEVTLQKLDNNSNLKLIEIFGGNGVGIVTKRGLQID
CCEEEEEEECCCCEEEEECCEEEEEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEE
VGDYAINPKPREMIEKNLISLLNDGEKAVVRISIPNGDEISKKTLNPKLGIIGGISILGT
ECCEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHCCCCCEEEECCCEECC
TGIVRPMSNDAYKESLLPQIDIAIQNGFENLVFVPGNIGTKYAKSVLNIEEDQIIEVSNF
CCEECCCCCCHHHHHCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCEEEEHHH
WGFMLEKAGEKGVKDITVFGHAGKIVKLAGGIFDTHSKVSDARNEILCAYTSTLCNNQEL
HHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHCCEEEEEHHHHCCCHHH
MKKILQSNTTEEIIEILAEKDILNEVFNLISKRVVERLCLRFPNIKFSCIIVDINGKILG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEE
KCFLGDRFD
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA