Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is yaeB [C]

Identifier: 150399269

GI number: 150399269

Start: 568983

End: 569366

Strand: Reverse

Name: yaeB [C]

Synonym: Mevan_0517

Alternate gene names: 150399269

Gene position: 569366-568983 (Counterclockwise)

Preceding gene: 150399270

Following gene: 150399268

Centisome position: 33.1

GC content: 30.21

Gene sequence:

>384_bases
TTGATTAGGAAAGAGTATACTATTTTTGAGATAGGTATTTTTAAAAAAGAAGAAACTGAATCTTACTTGGAGATTTTTCC
AGAGTTTTTTGACGGAACTGAAGGACTAACTAATAATTCAAAAATTTTAATTTTTTTGTGGTTTAATGGGTCAGATAATG
AAGATAAAAGGCGTACATTACGCGTACACCCAAAAGGAAACCTAAAAAATCCTGTTAGAGGGGTTTTTTCAACAAGATCA
CCAGTTAGGCCTAACCCTATTGCACTATATACTGTAAATATCAATAAAATCGTGGAAAATAGGATCTATATTGAAGAAAT
TGACGCATTTTCAGAAACGCCGTTAATTGATATAAAAATCTATTCAAAAGAACTTGATTTATAG

Upstream 100 bases:

>100_bases
GTTGAAAGACTTTGTTTAAGATTTCCAAATATTAAATTTTCTTGTATTATTGTGGATATAAACGGAAAAATCCTTGGAAA
ATGCTTTTTAGGTGATCGAT

Downstream 100 bases:

>100_bases
GGATATTATGAAATCGATTGGAAAAATTGCGATTAATATCTTAATAATTTTAACTTTAATTTTTGCGAGCTGTATTTCTT
TTAACAATGAAGTAAGTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MIRKEYTIFEIGIFKKEETESYLEIFPEFFDGTEGLTNNSKILIFLWFNGSDNEDKRRTLRVHPKGNLKNPVRGVFSTRS
PVRPNPIALYTVNINKIVENRIYIEEIDAFSETPLIDIKIYSKELDL

Sequences:

>Translated_127_residues
MIRKEYTIFEIGIFKKEETESYLEIFPEFFDGTEGLTNNSKILIFLWFNGSDNEDKRRTLRVHPKGNLKNPVRGVFSTRS
PVRPNPIALYTVNINKIVENRIYIEEIDAFSETPLIDIKIYSKELDL
>Mature_127_residues
MIRKEYTIFEIGIFKKEETESYLEIFPEFFDGTEGLTNNSKILIFLWFNGSDNEDKRRTLRVHPKGNLKNPVRGVFSTRS
PVRPNPIALYTVNINKIVENRIYIEEIDAFSETPLIDIKIYSKELDL

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 14903; Mature: 14903

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKEYTIFEIGIFKKEETESYLEIFPEFFDGTEGLTNNSKILIFLWFNGSDNEDKRRTL
CCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCEEE
RVHPKGNLKNPVRGVFSTRSPVRPNPIALYTVNINKIVENRIYIEEIDAFSETPLIDIKI
EECCCCCCCCCHHHHHCCCCCCCCCCEEEEEEEHHHHHCCEEEEEECCCCCCCCEEEEEE
YSKELDL
ECEECCC
>Mature Secondary Structure
MIRKEYTIFEIGIFKKEETESYLEIFPEFFDGTEGLTNNSKILIFLWFNGSDNEDKRRTL
CCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCEEE
RVHPKGNLKNPVRGVFSTRSPVRPNPIALYTVNINKIVENRIYIEEIDAFSETPLIDIKI
EECCCCCCCCCHHHHHCCCCCCCCCCEEEEEEEHHHHHCCEEEEEECCCCCCCCEEEEEE
YSKELDL
ECEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]