| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399188
Identifier: 150399188
GI number: 150399188
Start: 488219
End: 489307
Strand: Reverse
Name: 150399188
Synonym: Mevan_0436
Alternate gene names: NA
Gene position: 489307-488219 (Counterclockwise)
Preceding gene: 150399189
Following gene: 150399187
Centisome position: 28.45
GC content: 28.93
Gene sequence:
>1089_bases ATGGATGTAATAACTATGAAAAATTTTATAGATTTTAAGGATTTAAAAGTTGGCCCCCACCACATTTTCGTTATATTATC TTCTTTATTCGTATTATTTTCAAGTGTTTCAGGATCTACATCACTAATTGTACTTTTTTCAAGCTTTTTCTTTTATATTT CATTTATTTCTGGAAAAAAACTACTTAAAAACCTTGAATTTAAGCCATATAAAATAGATTTTAAAAAGCATTATTTATTC GGCATTTTCCTTATATTTATCGGCGTATTATTTACGATTTTAGACTTATTATGGGTTAGGGGAGTTCCATTATTTGATCC AGTATCAAGAAAGTTTTTAAATGTTCTTTATACTGCATTATCTCATATGTTACCATTAGGATTTGCAATAGCCATTTCAA GTTCAAAATTAAGCCTTAAAAGAATAGTTTTATATTCGGTAGCATTTTCTGCTCTAATCATGCTTTTAGGATATCGGACG CAAGTAATTTTGTTATTACTTTCAACCGTATTTTCACTTTATTATTCAAAAAGAATAAAAAATAATGCACTAGTTTATTC ATTTTTAGTACTTTTTATAGTTACTTTTGGGCTTTCATTTTTGAGACATTCCGTACTTGGAATTGGTGGAAACCCGATAA CTTCAAGAATAAGCCTTACAATGAGCGTACTTGATGTAATTGTTAATAATTTTACCGGAACTTATGAAGGAATTATTCAT ACATCTATATTTTCATCATACGGTATAATTCCCGGTTCTAGATTTGGCCCAAGAACGTTAATTGCAAACAGTATTGGAAT TACTGGAGTTACAATAACACCTACAATATTTGGAGCAGTTTTAATGGATTTTGGAATACTTGGAATTATTCCTTACTTTG GAATTTTCGGGTTACTTCTTGGAATTTCTCAAAAAATAGGCGAATGTTTAAAAGGGGCATATCTTGGAGTTTATTCAATA ATGGCGGCATATTTTCTTATTGGGATAGAAACAGGAATATTGGACTTTGATGTAATTATGGTTTATTTATTGGGGGCAAT TTTATCATTAAACGGCATTTTTAAGGGGATTTTAAATGTTAAAAAATAA
Upstream 100 bases:
>100_bases TCGAAAAAATTGTAACTTCTAATCTTACAGTTAGTATTATTTTAAATGAGACAAAAAGTGAAATAAATATGAGTAATTAC GAAAATGCAAAAGTAGCAAC
Downstream 100 bases:
>100_bases ATTTAATAATTTAGCTTTAAAAATTGATTCTAAATTTCATTTTGAACTTGATAATCCTGTGGTAATTATATCACTCGGAC ATTTGTTTTTATTTGTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MDVITMKNFIDFKDLKVGPHHIFVILSSLFVLFSSVSGSTSLIVLFSSFFFYISFISGKKLLKNLEFKPYKIDFKKHYLF GIFLIFIGVLFTILDLLWVRGVPLFDPVSRKFLNVLYTALSHMLPLGFAIAISSSKLSLKRIVLYSVAFSALIMLLGYRT QVILLLLSTVFSLYYSKRIKNNALVYSFLVLFIVTFGLSFLRHSVLGIGGNPITSRISLTMSVLDVIVNNFTGTYEGIIH TSIFSSYGIIPGSRFGPRTLIANSIGITGVTITPTIFGAVLMDFGILGIIPYFGIFGLLLGISQKIGECLKGAYLGVYSI MAAYFLIGIETGILDFDVIMVYLLGAILSLNGIFKGILNVKK
Sequences:
>Translated_362_residues MDVITMKNFIDFKDLKVGPHHIFVILSSLFVLFSSVSGSTSLIVLFSSFFFYISFISGKKLLKNLEFKPYKIDFKKHYLF GIFLIFIGVLFTILDLLWVRGVPLFDPVSRKFLNVLYTALSHMLPLGFAIAISSSKLSLKRIVLYSVAFSALIMLLGYRT QVILLLLSTVFSLYYSKRIKNNALVYSFLVLFIVTFGLSFLRHSVLGIGGNPITSRISLTMSVLDVIVNNFTGTYEGIIH TSIFSSYGIIPGSRFGPRTLIANSIGITGVTITPTIFGAVLMDFGILGIIPYFGIFGLLLGISQKIGECLKGAYLGVYSI MAAYFLIGIETGILDFDVIMVYLLGAILSLNGIFKGILNVKK >Mature_362_residues MDVITMKNFIDFKDLKVGPHHIFVILSSLFVLFSSVSGSTSLIVLFSSFFFYISFISGKKLLKNLEFKPYKIDFKKHYLF GIFLIFIGVLFTILDLLWVRGVPLFDPVSRKFLNVLYTALSHMLPLGFAIAISSSKLSLKRIVLYSVAFSALIMLLGYRT QVILLLLSTVFSLYYSKRIKNNALVYSFLVLFIVTFGLSFLRHSVLGIGGNPITSRISLTMSVLDVIVNNFTGTYEGIIH TSIFSSYGIIPGSRFGPRTLIANSIGITGVTITPTIFGAVLMDFGILGIIPYFGIFGLLLGISQKIGECLKGAYLGVYSI MAAYFLIGIETGILDFDVIMVYLLGAILSLNGIFKGILNVKK
Specific function: Unknown
COG id: COG1822
COG function: function code S; Predicted archaeal membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002760 [H]
Pfam domain/function: PF01901 DUF70 [H]
EC number: NA
Molecular weight: Translated: 40070; Mature: 40070
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVITMKNFIDFKDLKVGPHHIFVILSSLFVLFSSVSGSTSLIVLFSSFFFYISFISGKK CCCEEHHHHCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LLKNLEFKPYKIDFKKHYLFGIFLIFIGVLFTILDLLWVRGVPLFDPVSRKFLNVLYTAL HHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH SHMLPLGFAIAISSSKLSLKRIVLYSVAFSALIMLLGYRTQVILLLLSTVFSLYYSKRIK HHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NNALVYSFLVLFIVTFGLSFLRHSVLGIGGNPITSRISLTMSVLDVIVNNFTGTYEGIIH CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH TSIFSSYGIIPGSRFGPRTLIANSIGITGVTITPTIFGAVLMDFGILGIIPYFGIFGLLL HHHHHHCCCCCCCCCCCHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH GISQKIGECLKGAYLGVYSIMAAYFLIGIETGILDFDVIMVYLLGAILSLNGIFKGILNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC KK CC >Mature Secondary Structure MDVITMKNFIDFKDLKVGPHHIFVILSSLFVLFSSVSGSTSLIVLFSSFFFYISFISGKK CCCEEHHHHCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LLKNLEFKPYKIDFKKHYLFGIFLIFIGVLFTILDLLWVRGVPLFDPVSRKFLNVLYTAL HHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH SHMLPLGFAIAISSSKLSLKRIVLYSVAFSALIMLLGYRTQVILLLLSTVFSLYYSKRIK HHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NNALVYSFLVLFIVTFGLSFLRHSVLGIGGNPITSRISLTMSVLDVIVNNFTGTYEGIIH CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH TSIFSSYGIIPGSRFGPRTLIANSIGITGVTITPTIFGAVLMDFGILGIIPYFGIFGLLL HHHHHHCCCCCCCCCCCHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH GISQKIGECLKGAYLGVYSIMAAYFLIGIETGILDFDVIMVYLLGAILSLNGIFKGILNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC KK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]