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The map label for this gene is epsC [H]

Identifier: 150399163

GI number: 150399163

Start: 462664

End: 464100

Strand: Reverse

Name: epsC [H]

Synonym: Mevan_0410

Alternate gene names: 150399163

Gene position: 464100-462664 (Counterclockwise)

Preceding gene: 150399164

Following gene: 150399162

Centisome position: 26.98

GC content: 28.18

Gene sequence:

>1437_bases
ATGGACAATGAAAAAGCCATAATCATTGGTGCAGGGGGCGCTGGAAAAGAACTTTTGAATGAATTTATAGCTGGTTCATA
TCCAATAAATATTTTGGGATTTATAGATGATAACGTAACTGAATCAATAAAAAGTTTCCCAATCCTCGGTAAAATTGAAA
ATTTAAAACAAATTATACCAAAATATGGTATAAAAATAGTTTTTATTGCAATGCCTGCTACTGAAGGTGAATTACTTAAA
AAAATTTATCTTGAATGTATTAAGTTTCCAGTTAAAATTAAATTAATACCAAGATATTCTGAAATATTATTAAATAGGGT
TAATCTAACCCAATTAAGGGAAATTTCTGTTGAAGACATTATTGGAAAAAAGGTTACAAAAAAAATGTTTGAAAATATCT
CAAAAAAGGTTGAGGGTAAAACATTTATTGTCTTTGGTGCTGCTGGATCTATTGGCTCAAAATTATGTCAACAAATTGCA
AGTTTATGCCCTAAAAAATTAATCATGGTCGACTGGTCAGAAAATGGAATGTTTTATCTAGAAGACAAGATAAATAAAAT
TATTAAGACAAATGATAAGGTTTCATTAAATAATTTTTCATACTATATTGGAAATATTCAAGATGAAGTCCGCATGAATC
AAATAATTGGTAGTGAAAAACCAGACGTAATTATTAATGCTGCAGCATATAAACACGTTCCACTAATGGAATTAAATTAC
TATGAAGCTATCAAAAATAATGTAATGGGTTCAAAAAATTTATATGAAATTGCAATCAAACACCAAGTAAAAAATTTTAT
ATTAATATCTTCAGATAAGGCTGTAAATCCGACAAATATTATGGGCGTTACAAAAAGAATAACTGAAAAAATGATGCATT
ACTATGCATCACTAGACAATTCAAAAACTTCCTTTTTAGCCGTTAGATTTGGAAATGTAATAAATAGTAATGGAAGTGTT
ATACCTACATTTCAAAAACAAATTAGGGAAGGCCGTATAACAATAACTCATAAAGATATTATTCGGTATTTCATGAGTAT
AGATGAAGCTGTTTATTTGATATTACAGTGTTGGGTTCAAGGAACTAATGATGAAATATTTGTTTTAGATATGGGGGAAC
CAATTAAGATTATTGACCTTGCAACACTAATGATAAAAATTGCAGGTTTGGAATTAGATAAAGATGTTAAATTAGAATTT
ATCGGATTAAGACCTGGGGAAAAACTATATGAAGAACCGTTAACAAAAATTGAAGAAACGTTGGCAACAAAAAACGACAA
AATTTATATTTTAAAAAGAGATGAAGAATTTGACCATAAAGAATTTATCGATACAGTAACCCAATTAGTTAACGTTAGTG
GGGAAAAAACATTTGATGAAGTAAAACCGATATTGAAAAAATTAGTGCCTACTTATAAAGAATTCGATATGGTGTAA

Upstream 100 bases:

>100_bases
ATGGGTCAAAATAATATTAAACATATAAACAAAAATTATAATTATTATCTAGAAATGGAAAAAGTTGAAAAAATTTACAA
AGAAGTACTCGGGTGTAAAA

Downstream 100 bases:

>100_bases
AAATGGAACTTAATTGGAACGTTTTAAATAAGTTAAATGAAGATTTTGGTGATTCATTTTATTTACTTGATTCAAATAAA
TTCGTTAAAAATTATGATGA

Product: polysaccharide biosynthesis protein CapD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MDNEKAIIIGAGGAGKELLNEFIAGSYPINILGFIDDNVTESIKSFPILGKIENLKQIIPKYGIKIVFIAMPATEGELLK
KIYLECIKFPVKIKLIPRYSEILLNRVNLTQLREISVEDIIGKKVTKKMFENISKKVEGKTFIVFGAAGSIGSKLCQQIA
SLCPKKLIMVDWSENGMFYLEDKINKIIKTNDKVSLNNFSYYIGNIQDEVRMNQIIGSEKPDVIINAAAYKHVPLMELNY
YEAIKNNVMGSKNLYEIAIKHQVKNFILISSDKAVNPTNIMGVTKRITEKMMHYYASLDNSKTSFLAVRFGNVINSNGSV
IPTFQKQIREGRITITHKDIIRYFMSIDEAVYLILQCWVQGTNDEIFVLDMGEPIKIIDLATLMIKIAGLELDKDVKLEF
IGLRPGEKLYEEPLTKIEETLATKNDKIYILKRDEEFDHKEFIDTVTQLVNVSGEKTFDEVKPILKKLVPTYKEFDMV

Sequences:

>Translated_478_residues
MDNEKAIIIGAGGAGKELLNEFIAGSYPINILGFIDDNVTESIKSFPILGKIENLKQIIPKYGIKIVFIAMPATEGELLK
KIYLECIKFPVKIKLIPRYSEILLNRVNLTQLREISVEDIIGKKVTKKMFENISKKVEGKTFIVFGAAGSIGSKLCQQIA
SLCPKKLIMVDWSENGMFYLEDKINKIIKTNDKVSLNNFSYYIGNIQDEVRMNQIIGSEKPDVIINAAAYKHVPLMELNY
YEAIKNNVMGSKNLYEIAIKHQVKNFILISSDKAVNPTNIMGVTKRITEKMMHYYASLDNSKTSFLAVRFGNVINSNGSV
IPTFQKQIREGRITITHKDIIRYFMSIDEAVYLILQCWVQGTNDEIFVLDMGEPIKIIDLATLMIKIAGLELDKDVKLEF
IGLRPGEKLYEEPLTKIEETLATKNDKIYILKRDEEFDHKEFIDTVTQLVNVSGEKTFDEVKPILKKLVPTYKEFDMV
>Mature_478_residues
MDNEKAIIIGAGGAGKELLNEFIAGSYPINILGFIDDNVTESIKSFPILGKIENLKQIIPKYGIKIVFIAMPATEGELLK
KIYLECIKFPVKIKLIPRYSEILLNRVNLTQLREISVEDIIGKKVTKKMFENISKKVEGKTFIVFGAAGSIGSKLCQQIA
SLCPKKLIMVDWSENGMFYLEDKINKIIKTNDKVSLNNFSYYIGNIQDEVRMNQIIGSEKPDVIINAAAYKHVPLMELNY
YEAIKNNVMGSKNLYEIAIKHQVKNFILISSDKAVNPTNIMGVTKRITEKMMHYYASLDNSKTSFLAVRFGNVINSNGSV
IPTFQKQIREGRITITHKDIIRYFMSIDEAVYLILQCWVQGTNDEIFVLDMGEPIKIIDLATLMIKIAGLELDKDVKLEF
IGLRPGEKLYEEPLTKIEETLATKNDKIYILKRDEEFDHKEFIDTVTQLVNVSGEKTFDEVKPILKKLVPTYKEFDMV

Specific function: Involved in biofilm formation [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 54353; Mature: 54353

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNEKAIIIGAGGAGKELLNEFIAGSYPINILGFIDDNVTESIKSFPILGKIENLKQIIP
CCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHH
KYGIKIVFIAMPATEGELLKKIYLECIKFPVKIKLIPRYSEILLNRVNLTQLREISVEDI
HCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCHHHHHHCCHHHH
IGKKVTKKMFENISKKVEGKTFIVFGAAGSIGSKLCQQIASLCPKKLIMVDWSENGMFYL
HHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEE
EDKINKIIKTNDKVSLNNFSYYIGNIQDEVRMNQIIGSEKPDVIINAAAYKHVPLMELNY
HHHHHHHHCCCCCEEECCEEEEECCCHHHHHHHHHHCCCCCCEEEEECHHCCCCEEECHH
YEAIKNNVMGSKNLYEIAIKHQVKNFILISSDKAVNPTNIMGVTKRITEKMMHYYASLDN
HHHHHHCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SKTSFLAVRFGNVINSNGSVIPTFQKQIREGRITITHKDIIRYFMSIDEAVYLILQCWVQ
CCCEEEEEEECCEECCCCCEEHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHC
GTNDEIFVLDMGEPIKIIDLATLMIKIAGLELDKDVKLEFIGLRPGEKLYEEPLTKIEET
CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
LATKNDKIYILKRDEEFDHKEFIDTVTQLVNVSGEKTFDEVKPILKKLVPTYKEFDMV
HHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure
MDNEKAIIIGAGGAGKELLNEFIAGSYPINILGFIDDNVTESIKSFPILGKIENLKQIIP
CCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHH
KYGIKIVFIAMPATEGELLKKIYLECIKFPVKIKLIPRYSEILLNRVNLTQLREISVEDI
HCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCHHHHHHCCHHHH
IGKKVTKKMFENISKKVEGKTFIVFGAAGSIGSKLCQQIASLCPKKLIMVDWSENGMFYL
HHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEE
EDKINKIIKTNDKVSLNNFSYYIGNIQDEVRMNQIIGSEKPDVIINAAAYKHVPLMELNY
HHHHHHHHCCCCCEEECCEEEEECCCHHHHHHHHHHCCCCCCEEEEECHHCCCCEEECHH
YEAIKNNVMGSKNLYEIAIKHQVKNFILISSDKAVNPTNIMGVTKRITEKMMHYYASLDN
HHHHHHCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SKTSFLAVRFGNVINSNGSVIPTFQKQIREGRITITHKDIIRYFMSIDEAVYLILQCWVQ
CCCEEEEEEECCEECCCCCEEHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHC
GTNDEIFVLDMGEPIKIIDLATLMIKIAGLELDKDVKLEFIGLRPGEKLYEEPLTKIEET
CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
LATKNDKIYILKRDEEFDHKEFIDTVTQLVNVSGEKTFDEVKPILKKLVPTYKEFDMV
HHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]