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The map label for this gene is lysA [H]

Identifier: 150399162

GI number: 150399162

Start: 461432

End: 462661

Strand: Reverse

Name: lysA [H]

Synonym: Mevan_0409

Alternate gene names: 150399162

Gene position: 462661-461432 (Counterclockwise)

Preceding gene: 150399163

Following gene: 150399161

Centisome position: 26.9

GC content: 28.37

Gene sequence:

>1230_bases
ATGGAACTTAATTGGAACGTTTTAAATAAGTTAAATGAAGATTTTGGTGATTCATTTTATTTACTTGATTCAAATAAATT
CGTTAAAAATTATGATGAATTTCTAGGAGAATTTCAGAAAATATACCCTAATACGGTAATTGCATATTCATATAAAACGA
ATTACCTGCCACATTTATGTTCAATTGTTAACAAAAAAGGTGGCTTTGCAGAAGTAGTTTCTAAAATGGAGTATGATTTA
GCAATAAAGATTGGGGTAATCCCCTCCAACATTATTGTAAACGGGCCCCTCAAAACAAAAGAACATTTGGAGTATTTTTT
ACTCAAAGGAAGCATTGTAAATGTTGATTCATACCGAGAATTAGACTTAATTAGAGAAATTGCAAATTCCAATCCAGGTA
AAATTTTATCCGTTGGCATAAGGTGTAATTTTGAGATGGGTTCTACAGTATCCCGTTTTGGTTTTGATGTAAGGGATGCA
GAATTTATTGAAAAATTCAAAGAACTTAAAAAAATCGATAATTTATACATCAAAGGAATTCATTGTCATTTTCCAGATAG
AAATTTAGATTCATACTCAAAAAGAGTTGATAATTTAATAAATATTTTAGATTTGTTGTTTAAAGAGAATATCCCTGAAT
TTGTAGATATTGGTGGAGGTTATTTTGGAAAAGTAAACGACTTTTTGGCAAAGCAATTCAATTGCAATGTTCCATCGTAT
TCCGATTATGCAAGTATCATCGCATCAAGATTTAAAGAATATTTTAAAAATATACCTGAAAATAGAAAGCCGAAATTAAT
TTTGGAACCGGGCACGGCACTTGTAGCAGATACTATGAAGTTTATTGCTAAAATTGTTGAAATTAAAAATATTAGGGGTA
AAAAAATTGCAATGACTACGGGTAGTAAATTTAATATGGGATTATTCGGTTTAAGCATAAATTTACCAATTAATGTATAT
TCTGAATTTAAAAATGGAAAATTTATTAATAATGTTGACATTTCGGGATATACTTGTATTGAAGCAGATTATTTATTTAA
AAACTACTGCGGAATTTTGAATATCGGAGATTATATTGCTTTTGACAATGTAGGTTCTTATTCATTCGTTTTTAAACCAC
CATTCATCTGTCCAAACGTTCCAATAATTGATTATAATGGGGATAAGTTTAAAATTGTTAAACATAAAGAGACTTTTGAA
GATATTTTTAAAACATATATGTTCGAGTAA

Upstream 100 bases:

>100_bases
CCCAATTAGTTAACGTTAGTGGGGAAAAAACATTTGATGAAGTAAAACCGATATTGAAAAAATTAGTGCCTACTTATAAA
GAATTCGATATGGTGTAAAA

Downstream 100 bases:

>100_bases
AATAGGGGCATTGGCATGGAAACAGAAAGATTAATCTGGTTTAAAGAAGAAATAATTCCTGTAAGTCAGGCCAAAATAAA
TGTTTTAGCCCCTACAAGCC

Product: Orn/DAP/Arg decarboxylase 2

Products: NA

Alternate protein names: DAP decarboxylase [H]

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MELNWNVLNKLNEDFGDSFYLLDSNKFVKNYDEFLGEFQKIYPNTVIAYSYKTNYLPHLCSIVNKKGGFAEVVSKMEYDL
AIKIGVIPSNIIVNGPLKTKEHLEYFLLKGSIVNVDSYRELDLIREIANSNPGKILSVGIRCNFEMGSTVSRFGFDVRDA
EFIEKFKELKKIDNLYIKGIHCHFPDRNLDSYSKRVDNLINILDLLFKENIPEFVDIGGGYFGKVNDFLAKQFNCNVPSY
SDYASIIASRFKEYFKNIPENRKPKLILEPGTALVADTMKFIAKIVEIKNIRGKKIAMTTGSKFNMGLFGLSINLPINVY
SEFKNGKFINNVDISGYTCIEADYLFKNYCGILNIGDYIAFDNVGSYSFVFKPPFICPNVPIIDYNGDKFKIVKHKETFE
DIFKTYMFE

Sequences:

>Translated_409_residues
MELNWNVLNKLNEDFGDSFYLLDSNKFVKNYDEFLGEFQKIYPNTVIAYSYKTNYLPHLCSIVNKKGGFAEVVSKMEYDL
AIKIGVIPSNIIVNGPLKTKEHLEYFLLKGSIVNVDSYRELDLIREIANSNPGKILSVGIRCNFEMGSTVSRFGFDVRDA
EFIEKFKELKKIDNLYIKGIHCHFPDRNLDSYSKRVDNLINILDLLFKENIPEFVDIGGGYFGKVNDFLAKQFNCNVPSY
SDYASIIASRFKEYFKNIPENRKPKLILEPGTALVADTMKFIAKIVEIKNIRGKKIAMTTGSKFNMGLFGLSINLPINVY
SEFKNGKFINNVDISGYTCIEADYLFKNYCGILNIGDYIAFDNVGSYSFVFKPPFICPNVPIIDYNGDKFKIVKHKETFE
DIFKTYMFE
>Mature_409_residues
MELNWNVLNKLNEDFGDSFYLLDSNKFVKNYDEFLGEFQKIYPNTVIAYSYKTNYLPHLCSIVNKKGGFAEVVSKMEYDL
AIKIGVIPSNIIVNGPLKTKEHLEYFLLKGSIVNVDSYRELDLIREIANSNPGKILSVGIRCNFEMGSTVSRFGFDVRDA
EFIEKFKELKKIDNLYIKGIHCHFPDRNLDSYSKRVDNLINILDLLFKENIPEFVDIGGGYFGKVNDFLAKQFNCNVPSY
SDYASIIASRFKEYFKNIPENRKPKLILEPGTALVADTMKFIAKIVEIKNIRGKKIAMTTGSKFNMGLFGLSINLPINVY
SEFKNGKFINNVDISGYTCIEADYLFKNYCGILNIGDYIAFDNVGSYSFVFKPPFICPNVPIIDYNGDKFKIVKHKETFE
DIFKTYMFE

Specific function: Unknown

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-II family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009006
- InterPro:   IPR002986
- InterPro:   IPR022643
- InterPro:   IPR022657
- InterPro:   IPR022644
- InterPro:   IPR022653
- InterPro:   IPR000183 [H]

Pfam domain/function: PF02784 Orn_Arg_deC_N; PF00278 Orn_DAP_Arg_deC [H]

EC number: =4.1.1.20 [H]

Molecular weight: Translated: 46945; Mature: 46945

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELNWNVLNKLNEDFGDSFYLLDSNKFVKNYDEFLGEFQKIYPNTVIAYSYKTNYLPHLC
CCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHH
SIVNKKGGFAEVVSKMEYDLAIKIGVIPSNIIVNGPLKTKEHLEYFLLKGSIVNVDSYRE
HHHCCCCCHHHHHHHCCCCEEEEEEEECCCEEEECCCCCHHHHHEEEEECCEECCCCHHH
LDLIREIANSNPGKILSVGIRCNFEMGSTVSRFGFDVRDAEFIEKFKELKKIDNLYIKGI
HHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEE
HCHFPDRNLDSYSKRVDNLINILDLLFKENIPEFVDIGGGYFGKVNDFLAKQFNCNVPSY
EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCH
SDYASIIASRFKEYFKNIPENRKPKLILEPGTALVADTMKFIAKIVEIKNIRGKKIAMTT
HHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEC
GSKFNMGLFGLSINLPINVYSEFKNGKFINNVDISGYTCIEADYLFKNYCGILNIGDYIA
CCCCCCEEEEEEEECCEEEEECCCCCCEEEECCCCCEEEEEHHHHHHHCCCEEECCCEEE
FDNVGSYSFVFKPPFICPNVPIIDYNGDKFKIVKHKETFEDIFKTYMFE
ECCCCCEEEEECCCCCCCCCCEEECCCCEEEEEECHHHHHHHHHHHCCC
>Mature Secondary Structure
MELNWNVLNKLNEDFGDSFYLLDSNKFVKNYDEFLGEFQKIYPNTVIAYSYKTNYLPHLC
CCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHH
SIVNKKGGFAEVVSKMEYDLAIKIGVIPSNIIVNGPLKTKEHLEYFLLKGSIVNVDSYRE
HHHCCCCCHHHHHHHCCCCEEEEEEEECCCEEEECCCCCHHHHHEEEEECCEECCCCHHH
LDLIREIANSNPGKILSVGIRCNFEMGSTVSRFGFDVRDAEFIEKFKELKKIDNLYIKGI
HHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEE
HCHFPDRNLDSYSKRVDNLINILDLLFKENIPEFVDIGGGYFGKVNDFLAKQFNCNVPSY
EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCH
SDYASIIASRFKEYFKNIPENRKPKLILEPGTALVADTMKFIAKIVEIKNIRGKKIAMTT
HHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEC
GSKFNMGLFGLSINLPINVYSEFKNGKFINNVDISGYTCIEADYLFKNYCGILNIGDYIA
CCCCCCEEEEEEEECCEEEEECCCCCCEEEECCCCCEEEEEHHHHHHHCCCEEECCCEEE
FDNVGSYSFVFKPPFICPNVPIIDYNGDKFKIVKHKETFEDIFKTYMFE
ECCCCCEEEEECCCCCCCCCCEEECCCCEEEEEECHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]