Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

Click here to switch to the map view.

The map label for this gene is 150399147

Identifier: 150399147

GI number: 150399147

Start: 449042

End: 449446

Strand: Reverse

Name: 150399147

Synonym: Mevan_0394

Alternate gene names: NA

Gene position: 449446-449042 (Counterclockwise)

Preceding gene: 150399148

Following gene: 150399146

Centisome position: 26.13

GC content: 29.38

Gene sequence:

>405_bases
ATGATAATCAAGATAAATGCTAAGGTAAAACCAACTGAAGATAGTGAAAAGGTTTTAAACGCAATTAAAAATATTTTTAT
GGATATAAAAACAGAATTTGACGAAAATATTATTTTTTGTGAGTCAAAAAATGTATCAAGATTTAAAGAATTACTTCGAA
GTCAGGCAATACTTGATGCAGCTAGAAACGTTTTAGAACGGAATATTATCGGAAATAGGACTAAATTTTACATAAATAAA
CAAGCTGCATATTCGGGGTTATTGAATTTTGATAAGGATATTCATGGTGGAATAAAACTTGAATTTATCGCAGAAGAGGG
CGAAGATATTTTAAAACTATTAAAGGACATTGCGCCAAGAACAAGGCACGGCGTAATTATTGATGAAGATGAAGAAGATA
ATTAA

Upstream 100 bases:

>100_bases
TAAAAATTCTTAAAATTTTATTAACTGGACTTTCATTAATTAAAATTTTATTAATTAGTATATATTCAAAAATTTCTTTA
AGATCTGTTAGTGATAATTT

Downstream 100 bases:

>100_bases
AATATAGGCTTATTAATAAATAAATTCTTAAAAATATTAAACGTAAATTTTATAAAAAAATTAAAAGAAAATTAAAACAA
AATAAATAACCTTATATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MIIKINAKVKPTEDSEKVLNAIKNIFMDIKTEFDENIIFCESKNVSRFKELLRSQAILDAARNVLERNIIGNRTKFYINK
QAAYSGLLNFDKDIHGGIKLEFIAEEGEDILKLLKDIAPRTRHGVIIDEDEEDN

Sequences:

>Translated_134_residues
MIIKINAKVKPTEDSEKVLNAIKNIFMDIKTEFDENIIFCESKNVSRFKELLRSQAILDAARNVLERNIIGNRTKFYINK
QAAYSGLLNFDKDIHGGIKLEFIAEEGEDILKLLKDIAPRTRHGVIIDEDEEDN
>Mature_134_residues
MIIKINAKVKPTEDSEKVLNAIKNIFMDIKTEFDENIIFCESKNVSRFKELLRSQAILDAARNVLERNIIGNRTKFYINK
QAAYSGLLNFDKDIHGGIKLEFIAEEGEDILKLLKDIAPRTRHGVIIDEDEEDN

Specific function: Unknown

COG id: COG1931

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0201 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022803
- InterPro:   IPR002739 [H]

Pfam domain/function: PF01877 DUF54 [H]

EC number: NA

Molecular weight: Translated: 15394; Mature: 15394

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKINAKVKPTEDSEKVLNAIKNIFMDIKTEFDENIIFCESKNVSRFKELLRSQAILDA
CEEEECCEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHH
ARNVLERNIIGNRTKFYINKQAAYSGLLNFDKDIHGGIKLEFIAEEGEDILKLLKDIAPR
HHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCC
TRHGVIIDEDEEDN
CCCCEEECCCCCCC
>Mature Secondary Structure
MIIKINAKVKPTEDSEKVLNAIKNIFMDIKTEFDENIIFCESKNVSRFKELLRSQAILDA
CEEEECCEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHH
ARNVLERNIIGNRTKFYINKQAAYSGLLNFDKDIHGGIKLEFIAEEGEDILKLLKDIAPR
HHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCC
TRHGVIIDEDEEDN
CCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]