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The map label for this gene is cdhD [H]

Identifier: 150399061

GI number: 150399061

Start: 357296

End: 358450

Strand: Reverse

Name: cdhD [H]

Synonym: Mevan_0307

Alternate gene names: 150399061

Gene position: 358450-357296 (Counterclockwise)

Preceding gene: 150399062

Following gene: 150399060

Centisome position: 20.84

GC content: 35.93

Gene sequence:

>1155_bases
ATGGATACGATGTCACAGATACTGAAACTACTCGAAAAAAACGATTACATCGAAATAAATGAGTTTAGAATGGATGTAGA
GGAACTTGAACTTACTTTAATGCCAACCCTACAAAAAGTCGTTCAAAAAGTTGCTGAAAAACAATTAGATGCTAAAAAAG
AGTTAGAAAATAATTTAGCATTTAAATATCCTGTAAATGAATACCCTGGAAAAGTAAATGAAGTACTCTTAGGTGGAAAA
AATAGAAATACAGTAAAACTTGGTGGGCAAAATAGTTTATATCGTTTTGAAGAACCACAACCAAATGCTCCTGTAGTTAC
TTTTGACGTTTTTGATATTCCTATGAAAGGACTACCTAGGCCGATTAAAGAGAATTTTGAAGAAGTAATGGATAGTCCTG
GAGAATGGGCAAGAAAAGCCGTTAAAGAGTTTGGGGCAGATATGATTACACTTCATTTAATTGGGACAGATCCAAAAGTT
AAAGATAAATCCTTAAAAGATGCATCAAAAGATTTAGAAGAAGTATTACAGGCAGTAAAGGTTCCATTAGTAATTGGCGG
GTCAGGAAATCCTCAAAAAGATCCATTAGTTTTAGAAATGGCTGCAGAAGTTGCAGATGGTGAGAGATGTTTACTTGCAT
CTGCAAACCTTGATTTGGACTACCAAAAAATTGCACGGGCTGCAGTAAAACATAACCATGCAGTACTTTCTTGGGCGATT
TCTGATATAAATATGCAAAAAGTACTGAATAAAGCACTTATAAAAGAAGGACTGACTCCAAATGATATCGTAATGGACCC
AACAACATGTGCACTTGGATACGGGATTGAATTTTCAATTGATGTTATGACAAGAACAAGACTCGCCGCTTTAAAAGGAG
AGGAAATTCTACAAATGCCAATGTCTTCAGGAACAACAAACGCTTGGGGTTCAAGAGAAGCATGGATGAAAAAAGATGAA
TGGGGGCCTACTAAATATCGAGGGCCTATTTGGGAAGTAGTAACTGGACTTACGATGATGCTATGCGGGGTTGACATATT
CATGATGCTACACCCGCTTTCAGTTAAAACGTTAAAAGAAATCGGTTCAACACTTACAAAAGAATATAAATCAAAAGAAT
CCCAGGATATTTCCGAATGGATAAGCAAGTTCTAA

Upstream 100 bases:

>100_bases
TGGAAGGAAAACCATTATTTGAGCTTCCTGATGATTCAAATACTGTAATTTCCGTTTCAAAAATTATTGAAAAAATTTTA
GGTTAACTGGATGTGAAATC

Downstream 100 bases:

>100_bases
GGGGGTTTTAAAAGTGAAAGCTACAGCAATGGATATCTATAAATTACTTCCAAAAACGAACTGTGGAAAATGTGGTGACG
CATCTTGCATGGCATTTGCA

Product: acetyl-CoA decarbonylase/synthase complex subunit delta

Products: CO2; AH2

Alternate protein names: ACDS complex subunit delta; Corrinoid/iron-sulfur component small subunit [H]

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MDTMSQILKLLEKNDYIEINEFRMDVEELELTLMPTLQKVVQKVAEKQLDAKKELENNLAFKYPVNEYPGKVNEVLLGGK
NRNTVKLGGQNSLYRFEEPQPNAPVVTFDVFDIPMKGLPRPIKENFEEVMDSPGEWARKAVKEFGADMITLHLIGTDPKV
KDKSLKDASKDLEEVLQAVKVPLVIGGSGNPQKDPLVLEMAAEVADGERCLLASANLDLDYQKIARAAVKHNHAVLSWAI
SDINMQKVLNKALIKEGLTPNDIVMDPTTCALGYGIEFSIDVMTRTRLAALKGEEILQMPMSSGTTNAWGSREAWMKKDE
WGPTKYRGPIWEVVTGLTMMLCGVDIFMMLHPLSVKTLKEIGSTLTKEYKSKESQDISEWISKF

Sequences:

>Translated_384_residues
MDTMSQILKLLEKNDYIEINEFRMDVEELELTLMPTLQKVVQKVAEKQLDAKKELENNLAFKYPVNEYPGKVNEVLLGGK
NRNTVKLGGQNSLYRFEEPQPNAPVVTFDVFDIPMKGLPRPIKENFEEVMDSPGEWARKAVKEFGADMITLHLIGTDPKV
KDKSLKDASKDLEEVLQAVKVPLVIGGSGNPQKDPLVLEMAAEVADGERCLLASANLDLDYQKIARAAVKHNHAVLSWAI
SDINMQKVLNKALIKEGLTPNDIVMDPTTCALGYGIEFSIDVMTRTRLAALKGEEILQMPMSSGTTNAWGSREAWMKKDE
WGPTKYRGPIWEVVTGLTMMLCGVDIFMMLHPLSVKTLKEIGSTLTKEYKSKESQDISEWISKF
>Mature_384_residues
MDTMSQILKLLEKNDYIEINEFRMDVEELELTLMPTLQKVVQKVAEKQLDAKKELENNLAFKYPVNEYPGKVNEVLLGGK
NRNTVKLGGQNSLYRFEEPQPNAPVVTFDVFDIPMKGLPRPIKENFEEVMDSPGEWARKAVKEFGADMITLHLIGTDPKV
KDKSLKDASKDLEEVLQAVKVPLVIGGSGNPQKDPLVLEMAAEVADGERCLLASANLDLDYQKIARAAVKHNHAVLSWAI
SDINMQKVLNKALIKEGLTPNDIVMDPTTCALGYGIEFSIDVMTRTRLAALKGEEILQMPMSSGTTNAWGSREAWMKKDE
WGPTKYRGPIWEVVTGLTMMLCGVDIFMMLHPLSVKTLKEIGSTLTKEYKSKESQDISEWISKF

Specific function: Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). Probably maintains the overall quaternary structure of the ACDS complex [H]

COG id: COG2069

COG function: function code C; CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdhD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016041
- InterPro:   IPR004486
- InterPro:   IPR011005
- InterPro:   IPR000489 [H]

Pfam domain/function: PF03599 CdhD [H]

EC number: 1.2.99.2

Molecular weight: Translated: 43063; Mature: 43063

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTMSQILKLLEKNDYIEINEFRMDVEELELTLMPTLQKVVQKVAEKQLDAKKELENNLA
CCHHHHHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FKYPVNEYPGKVNEVLLGGKNRNTVKLGGQNSLYRFEEPQPNAPVVTFDVFDIPMKGLPR
EEECCHHCCCCHHHEEECCCCCCEEEECCCCCCEECCCCCCCCCEEEEEEEECCCCCCCC
PIKENFEEVMDSPGEWARKAVKEFGADMITLHLIGTDPKVKDKSLKDASKDLEEVLQAVK
HHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHC
VPLVIGGSGNPQKDPLVLEMAAEVADGERCLLASANLDLDYQKIARAAVKHNHAVLSWAI
CCEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEH
SDINMQKVLNKALIKEGLTPNDIVMDPTTCALGYGIEFSIDVMTRTRLAALKGEEILQMP
HHCCHHHHHHHHHHHCCCCCCCEEECCCHHHCCCCCEEEEEHHHHHHHHHHCCHHHHHCC
MSSGTTNAWGSREAWMKKDEWGPTKYRGPIWEVVTGLTMMLCGVDIFMMLHPLSVKTLKE
CCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IGSTLTKEYKSKESQDISEWISKF
HHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MDTMSQILKLLEKNDYIEINEFRMDVEELELTLMPTLQKVVQKVAEKQLDAKKELENNLA
CCHHHHHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FKYPVNEYPGKVNEVLLGGKNRNTVKLGGQNSLYRFEEPQPNAPVVTFDVFDIPMKGLPR
EEECCHHCCCCHHHEEECCCCCCEEEECCCCCCEECCCCCCCCCEEEEEEEECCCCCCCC
PIKENFEEVMDSPGEWARKAVKEFGADMITLHLIGTDPKVKDKSLKDASKDLEEVLQAVK
HHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHC
VPLVIGGSGNPQKDPLVLEMAAEVADGERCLLASANLDLDYQKIARAAVKHNHAVLSWAI
CCEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEH
SDINMQKVLNKALIKEGLTPNDIVMDPTTCALGYGIEFSIDVMTRTRLAALKGEEILQMP
HHCCHHHHHHHHHHHCCCCCCCEEECCCHHHCCCCCEEEEEHHHHHHHHHHCCHHHHHCC
MSSGTTNAWGSREAWMKKDEWGPTKYRGPIWEVVTGLTMMLCGVDIFMMLHPLSVKTLKE
CCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IGSTLTKEYKSKESQDISEWISKF
HHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CO; H2O; A

Specific reaction: CO + H2O + A = CO2 + AH2

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]