| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
Click here to switch to the map view.
The map label for this gene is 150399020
Identifier: 150399020
GI number: 150399020
Start: 311981
End: 312403
Strand: Reverse
Name: 150399020
Synonym: Mevan_0266
Alternate gene names: NA
Gene position: 312403-311981 (Counterclockwise)
Preceding gene: 150399021
Following gene: 150399016
Centisome position: 18.16
GC content: 39.01
Gene sequence:
>423_bases ATGTGTATCACAAACGAAGAAAACTGGAACGTCGTGAAGGACAAAAAAGTCTGGGGCGTTTCTGAAATGTACAAAAACAC GATCGCGAAGGTTGAAAAGGGCGATATGTTACTGATTTACGAAATGGGTATAACTGGAAAAGAACCAAAGCCACAATACA TTCGTGGACTTTATGAAGTCACTTCAGACGTTAATCGTGATGGAAAAAAGATATTTGGAACACACCCGAATAGGCCAAAC GAAACGTACCCGCTCAGAGTTAAATTAAAAGAGATTGAAGTGTTCAAGTCACCAATTCTATTTAAGCCACTAGTTGGTGA TCTCGAATTCATAAAAAACAAAAAACAGTGGTCAGGTTCACTCAGACGTGCGATGGTTCCGTTAAGCGAAAAAGACTTCA ACACTATTCGAAACGGTAAATAA
Upstream 100 bases:
>100_bases TACCGTTTACACCATCATTTCGAAAATGTTAAGTTGGGGTAACAACAAAATGTTTTGGTAGATAATATCGAGGGCGGTGG TTATTCTGACAAATTACTTC
Downstream 100 bases:
>100_bases CACATTTTACTTATTCTTCCTGATTAAACATAAGTTCTTCAGGCTGTTTTGCGCATAACATTTCATGTTCATGTAGTTCA AGCTGAGATAATATATACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MCITNEENWNVVKDKKVWGVSEMYKNTIAKVEKGDMLLIYEMGITGKEPKPQYIRGLYEVTSDVNRDGKKIFGTHPNRPN ETYPLRVKLKEIEVFKSPILFKPLVGDLEFIKNKKQWSGSLRRAMVPLSEKDFNTIRNGK
Sequences:
>Translated_140_residues MCITNEENWNVVKDKKVWGVSEMYKNTIAKVEKGDMLLIYEMGITGKEPKPQYIRGLYEVTSDVNRDGKKIFGTHPNRPN ETYPLRVKLKEIEVFKSPILFKPLVGDLEFIKNKKQWSGSLRRAMVPLSEKDFNTIRNGK >Mature_140_residues MCITNEENWNVVKDKKVWGVSEMYKNTIAKVEKGDMLLIYEMGITGKEPKPQYIRGLYEVTSDVNRDGKKIFGTHPNRPN ETYPLRVKLKEIEVFKSPILFKPLVGDLEFIKNKKQWSGSLRRAMVPLSEKDFNTIRNGK
Specific function: Unknown
COG id: COG1673
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0310 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002740 - InterPro: IPR015947 - InterPro: IPR022996 [H]
Pfam domain/function: PF01878 DUF55 [H]
EC number: NA
Molecular weight: Translated: 16264; Mature: 16264
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCITNEENWNVVKDKKVWGVSEMYKNTIAKVEKGDMLLIYEMGITGKEPKPQYIRGLYEV CCCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHH TSDVNRDGKKIFGTHPNRPNETYPLRVKLKEIEVFKSPILFKPLVGDLEFIKNKKQWSGS HHHCCCCCCEEECCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHH LRRAMVPLSEKDFNTIRNGK HHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MCITNEENWNVVKDKKVWGVSEMYKNTIAKVEKGDMLLIYEMGITGKEPKPQYIRGLYEV CCCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHH TSDVNRDGKKIFGTHPNRPNETYPLRVKLKEIEVFKSPILFKPLVGDLEFIKNKKQWSGS HHHCCCCCCEEECCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHH LRRAMVPLSEKDFNTIRNGK HHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]