| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150398981
Identifier: 150398981
GI number: 150398981
Start: 270468
End: 271097
Strand: Reverse
Name: 150398981
Synonym: Mevan_0227
Alternate gene names: NA
Gene position: 271097-270468 (Counterclockwise)
Preceding gene: 150398982
Following gene: 150398980
Centisome position: 15.76
GC content: 26.83
Gene sequence:
>630_bases ATGAAATCGTCTCAAAATTCTTTTAATAATTTTGAAGGATTCAATGAAAATGAATATTACATAACTCCTTCAGAAATGCT TGAATTTTTGTATTGTAAACGATATACCTACTTTATGAATTATTTGGGAATAAGCCAGCATGAAGAAAAACGGTACAAAG TTTTAAAGGGTAGAACAATTCATGAAAAAAAGGAGTTAGAAAATGCGAACTACTTACGTAAAAAAATAAACGTGGTTGAC AAAAAAATAAACGTTTCAATGGTTTCGAAAAACTATGGTATTAAAGGGATTGCCGATGAAGTTTTAACACTTTCAAACGG AACCATGGCTTCACTCGATTACAAATTTGCTGAGTACAATGACATAATATATAAAACATATAAAATGCAAACTATAATGT ACTCTTTAATGATAGCTGAAACTTTTAATGCAGAAGTTACACAAGGATATATATTATATTGTCGTGGAAAAAATGTCTTA AAAGAAATAGAAGTGAATATAAAAGAAATAAATAAGCTGAATAAATATTTAGAGGAGTTTAAAAAAGTAATGTCTGGACA TTACCCAAAATCAGCGTCAAATAAATTAAAATGTATTGATTGTTGTTATAAAAATATTTGTGTAAAATAA
Upstream 100 bases:
>100_bases AATTTAGATATTGATTCAATCTATGTATTTCCAATGAGTAAAGATGAATTAAATAAAGCAGGATTAATTGGCCAAGCGTT TGATAAAGAGTTGGTATCTG
Downstream 100 bases:
>100_bases TTGTTCCTTAAAAATTATAAACTTTAATTTGAGCTTATTTTTTAACATTGGTATCTAAAAAATTCTTAAAAATACGTAAT ACTTAAAAATAAATCTTTAA
Product: CRISPR-associated Cas4 family protein
Products: NA
Alternate protein names: CRISPR-Associated Exonuclease Cas4 Family Protein
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MKSSQNSFNNFEGFNENEYYITPSEMLEFLYCKRYTYFMNYLGISQHEEKRYKVLKGRTIHEKKELENANYLRKKINVVD KKINVSMVSKNYGIKGIADEVLTLSNGTMASLDYKFAEYNDIIYKTYKMQTIMYSLMIAETFNAEVTQGYILYCRGKNVL KEIEVNIKEINKLNKYLEEFKKVMSGHYPKSASNKLKCIDCCYKNICVK
Sequences:
>Translated_209_residues MKSSQNSFNNFEGFNENEYYITPSEMLEFLYCKRYTYFMNYLGISQHEEKRYKVLKGRTIHEKKELENANYLRKKINVVD KKINVSMVSKNYGIKGIADEVLTLSNGTMASLDYKFAEYNDIIYKTYKMQTIMYSLMIAETFNAEVTQGYILYCRGKNVL KEIEVNIKEINKLNKYLEEFKKVMSGHYPKSASNKLKCIDCCYKNICVK >Mature_209_residues MKSSQNSFNNFEGFNENEYYITPSEMLEFLYCKRYTYFMNYLGISQHEEKRYKVLKGRTIHEKKELENANYLRKKINVVD KKINVSMVSKNYGIKGIADEVLTLSNGTMASLDYKFAEYNDIIYKTYKMQTIMYSLMIAETFNAEVTQGYILYCRGKNVL KEIEVNIKEINKLNKYLEEFKKVMSGHYPKSASNKLKCIDCCYKNICVK
Specific function: Unknown
COG id: COG1468
COG function: function code L; RecB family exonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24659; Mature: 24659
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSQNSFNNFEGFNENEYYITPSEMLEFLYCKRYTYFMNYLGISQHEEKRYKVLKGRTI CCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCH HEKKELENANYLRKKINVVDKKINVSMVSKNYGIKGIADEVLTLSNGTMASLDYKFAEYN HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHEECCCCCEEEEECHHHHHC DIIYKTYKMQTIMYSLMIAETFNAEVTQGYILYCRGKNVLKEIEVNIKEINKLNKYLEEF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH KKVMSGHYPKSASNKLKCIDCCYKNICVK HHHHCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKSSQNSFNNFEGFNENEYYITPSEMLEFLYCKRYTYFMNYLGISQHEEKRYKVLKGRTI CCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCH HEKKELENANYLRKKINVVDKKINVSMVSKNYGIKGIADEVLTLSNGTMASLDYKFAEYN HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHEECCCCCEEEEECHHHHHC DIIYKTYKMQTIMYSLMIAETFNAEVTQGYILYCRGKNVLKEIEVNIKEINKLNKYLEEF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH KKVMSGHYPKSASNKLKCIDCCYKNICVK HHHHCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA