| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
Click here to switch to the map view.
The map label for this gene is 150398936
Identifier: 150398936
GI number: 150398936
Start: 211076
End: 211717
Strand: Reverse
Name: 150398936
Synonym: Mevan_0180
Alternate gene names: NA
Gene position: 211717-211076 (Counterclockwise)
Preceding gene: 150398937
Following gene: 150398935
Centisome position: 12.31
GC content: 33.18
Gene sequence:
>642_bases ATGACGTTAATTCCAGGAAGTGAAGTTTTAAGTACAACATTACATGCAATATCTCAAAGTTTACTGATTCCAGTAATTGT TGTACTTTTGATTTTTATGATTTATTCCGTAATGCTTTTTGGGGAGTTCATGGCAGAGTATTCGGGTAGAACCAAAATAA ATTCTAAAGAACTTCAAAAAATAATAACTGAAATTTCCAATAAACGTTCAAACGAAGTTTTAGAATCTATTAATAAACTA AATATCCCAAAATCATATATTAAAATAATTGAAGAATCCGATTTAAATGAATCAGCTGACCATAAATTAAGGGAAGCAAA TGCAAGAACTATTCTTGAAAAAGAAGAACTAAGGCTCGAAAAAACTCTTGAAAAAACGGACTTTATAACCCGACTTGGGC CAACATTTGGATTAATGGGAACTTTAATTCCAATGGGGCCAGGACTTGCAGCATTAGGTGCTGGGGATGTAACTTCCCTT GCAAATGCAATAATTATCGCATTTGATACAACCGTTGTAGGGCTTGCAGCAGGGGGTATTTGCTATGTTATTTCAAAAAT CAGGCGAAGATGGTATGAAGAACAAATGTATAACCTTGAATCAATTCTTGAATCTTTTCTGGAGGCTTTAAAAAATGATT AG
Upstream 100 bases:
>100_bases TCAAAAGAACTGTTTTTCGTAAGTTTGATTAGTATTTCACTATTTTTATTGGGTTACATAAAAAACAAAAAAGTGTCAAA AATAAAATGAGGCTGATTTA
Downstream 100 bases:
>100_bases AAAAAAGAATAGAAAAAGATTCAATAAGGGTGAAGAAGACCCAATGGCTGGAACTTCAAACCTTGTAGATGCAATGCTGG TTTTATCTGTTGGATTTTTA
Product: MotA/TolQ/ExbB proton channel
Products: NA
Alternate protein names: MotA/lQ/ExbB Proton Channel Family Protein; MotA/lQ/ExbB Proton Channel Family Domain Protein; Integral Membrane Protein; Transport-Related Membrane Protein; Transporter MotA/lQ/ExbB Proton Channel Family
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MTLIPGSEVLSTTLHAISQSLLIPVIVVLLIFMIYSVMLFGEFMAEYSGRTKINSKELQKIITEISNKRSNEVLESINKL NIPKSYIKIIEESDLNESADHKLREANARTILEKEELRLEKTLEKTDFITRLGPTFGLMGTLIPMGPGLAALGAGDVTSL ANAIIIAFDTTVVGLAAGGICYVISKIRRRWYEEQMYNLESILESFLEALKND
Sequences:
>Translated_213_residues MTLIPGSEVLSTTLHAISQSLLIPVIVVLLIFMIYSVMLFGEFMAEYSGRTKINSKELQKIITEISNKRSNEVLESINKL NIPKSYIKIIEESDLNESADHKLREANARTILEKEELRLEKTLEKTDFITRLGPTFGLMGTLIPMGPGLAALGAGDVTSL ANAIIIAFDTTVVGLAAGGICYVISKIRRRWYEEQMYNLESILESFLEALKND >Mature_212_residues TLIPGSEVLSTTLHAISQSLLIPVIVVLLIFMIYSVMLFGEFMAEYSGRTKINSKELQKIITEISNKRSNEVLESINKLN IPKSYIKIIEESDLNESADHKLREANARTILEKEELRLEKTLEKTDFITRLGPTFGLMGTLIPMGPGLAALGAGDVTSLA NAIIIAFDTTVVGLAAGGICYVISKIRRRWYEEQMYNLESILESFLEALKND
Specific function: Unknown
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23713; Mature: 23582
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLIPGSEVLSTTLHAISQSLLIPVIVVLLIFMIYSVMLFGEFMAEYSGRTKINSKELQK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH IITEISNKRSNEVLESINKLNIPKSYIKIIEESDLNESADHKLREANARTILEKEELRLE HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH KTLEKTDFITRLGPTFGLMGTLIPMGPGLAALGAGDVTSLANAIIIAFDTTVVGLAAGGI HHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH CYVISKIRRRWYEEQMYNLESILESFLEALKND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLIPGSEVLSTTLHAISQSLLIPVIVVLLIFMIYSVMLFGEFMAEYSGRTKINSKELQK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH IITEISNKRSNEVLESINKLNIPKSYIKIIEESDLNESADHKLREANARTILEKEELRLE HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH KTLEKTDFITRLGPTFGLMGTLIPMGPGLAALGAGDVTSLANAIIIAFDTTVVGLAAGGI HHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH CYVISKIRRRWYEEQMYNLESILESFLEALKND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA