| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150398921
Identifier: 150398921
GI number: 150398921
Start: 192380
End: 193318
Strand: Reverse
Name: 150398921
Synonym: Mevan_0165
Alternate gene names: NA
Gene position: 193318-192380 (Counterclockwise)
Preceding gene: 150398922
Following gene: 150398918
Centisome position: 11.24
GC content: 28.75
Gene sequence:
>939_bases ATGTATAAAAAAATACTAATAGGGCTGTTGTGTTTGCTTGTATTTTCACCATTACAAGGTCAAGAAATGCCTCAAGGAAA CATTACAGTTAATATTCCAAAGTATAACGTATCTTTTGACTACCATTTAACAGAAAATAAAAATTTTACATTTATAGAAT TAAATGAATCAAAGAAATGTTCAATAGTTGGTTACTTTGATAATTTACCAAATATGATTTATAGTGTAGAAAACGAAAAC TACAATATTACTCTTGTAAATGGAACAGTAGCAATAGTTTCTATAAATGCTACAGGATATAACAAAGTAAAAACTGCTGA AAACTGTAAATTCGTAGGTTGGAACTATACAATTAACCATGCATTCTTTTTAGTAACCGATATATATGAAATGACTACGG CTAAAATAGTTCTTACTAATCAAACTACATCAGATGGTGACAACTCTAGCACAGATCCTCCGTCAAACAATAACCGTAGA GGAGGTAGTGGAAGTGTAACTACTGATCAGACAGAAATCTCTAAAAACGTAATAAGTTCAATAAAGTCAGAAAAAATTAA ACAAATTCTTTCAAACGCTAAAGTAGTAGCTGGAAATACAGTTGACTATAATTATGCAGCAAATTTAAGAACTGATTCAA TGATTACAACAGTATCTGAATTAAATCAAGATACAGTAATTGTTGGAGGACCATTGGCAAATCCATACGCTAAAATGTAT GATAATAAATTTGACTTAAAAATAACTAATGATTATCCTGGAGAAAATAAAGGAGTAATTCAAGTTAAAGAAATTAATGG ATACATGGTAATTTATATTGCAGGTTCAGATAGATTTGGAACACTTGCAGCATTAGAATATTTTAAAACATTAGATGAAT TACCTGAAAAACCATTAATTATAGAATGGACTAGTACTGGATCAAAATTAATAAAGTAA
Upstream 100 bases:
>100_bases GGGGGCAAATATTAAAGAAATTAGTGGTAAAACTGTAATAACAATAGATGCAGTGGATGGATAATCCATTTAATTAAATC TTTTTCAAGGTGAACTTAAA
Downstream 100 bases:
>100_bases CTTTTTATTAAAAAAATAACTTTTTTTTATTTTTTAAAGGGTAGTTTCAGTATAAGGTAAAAGCTATGATTTTTACCCCA TGTAATGTTTATTTTACATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MYKKILIGLLCLLVFSPLQGQEMPQGNITVNIPKYNVSFDYHLTENKNFTFIELNESKKCSIVGYFDNLPNMIYSVENEN YNITLVNGTVAIVSINATGYNKVKTAENCKFVGWNYTINHAFFLVTDIYEMTTAKIVLTNQTTSDGDNSSTDPPSNNNRR GGSGSVTTDQTEISKNVISSIKSEKIKQILSNAKVVAGNTVDYNYAANLRTDSMITTVSELNQDTVIVGGPLANPYAKMY DNKFDLKITNDYPGENKGVIQVKEINGYMVIYIAGSDRFGTLAALEYFKTLDELPEKPLIIEWTSTGSKLIK
Sequences:
>Translated_312_residues MYKKILIGLLCLLVFSPLQGQEMPQGNITVNIPKYNVSFDYHLTENKNFTFIELNESKKCSIVGYFDNLPNMIYSVENEN YNITLVNGTVAIVSINATGYNKVKTAENCKFVGWNYTINHAFFLVTDIYEMTTAKIVLTNQTTSDGDNSSTDPPSNNNRR GGSGSVTTDQTEISKNVISSIKSEKIKQILSNAKVVAGNTVDYNYAANLRTDSMITTVSELNQDTVIVGGPLANPYAKMY DNKFDLKITNDYPGENKGVIQVKEINGYMVIYIAGSDRFGTLAALEYFKTLDELPEKPLIIEWTSTGSKLIK >Mature_312_residues MYKKILIGLLCLLVFSPLQGQEMPQGNITVNIPKYNVSFDYHLTENKNFTFIELNESKKCSIVGYFDNLPNMIYSVENEN YNITLVNGTVAIVSINATGYNKVKTAENCKFVGWNYTINHAFFLVTDIYEMTTAKIVLTNQTTSDGDNSSTDPPSNNNRR GGSGSVTTDQTEISKNVISSIKSEKIKQILSNAKVVAGNTVDYNYAANLRTDSMITTVSELNQDTVIVGGPLANPYAKMY DNKFDLKITNDYPGENKGVIQVKEINGYMVIYIAGSDRFGTLAALEYFKTLDELPEKPLIIEWTSTGSKLIK
Specific function: Unknown
COG id: COG1800
COG function: function code R; Predicted transglutaminase-like proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0252 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022651 - InterPro: IPR007562 [H]
Pfam domain/function: PF04473 DUF553; PF05124 S_layer_C [H]
EC number: NA
Molecular weight: Translated: 34701; Mature: 34701
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKKILIGLLCLLVFSPLQGQEMPQGNITVNIPKYNVSFDYHLTENKNFTFIELNESKKC CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEEEEEEEEECCCCEEEEEECCCCCE SIVGYFDNLPNMIYSVENENYNITLVNGTVAIVSINATGYNKVKTAENCKFVGWNYTINH EEEEECCCCCCEEEEEECCCEEEEEEECEEEEEEEECCCCCCEECCCCCEEEEEEEEECC AFFLVTDIYEMTTAKIVLTNQTTSDGDNSSTDPPSNNNRRGGSGSVTTDQTEISKNVISS EEEEEEEHHHHCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH IKSEKIKQILSNAKVVAGNTVDYNYAANLRTDSMITTVSELNQDTVIVGGPLANPYAKMY HHHHHHHHHHCCCEEEECCEEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHC DNKFDLKITNDYPGENKGVIQVKEINGYMVIYIAGSDRFGTLAALEYFKTLDELPEKPLI CCEEEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEE IEWTSTGSKLIK EEECCCCHHHCC >Mature Secondary Structure MYKKILIGLLCLLVFSPLQGQEMPQGNITVNIPKYNVSFDYHLTENKNFTFIELNESKKC CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEEEEEEEEECCCCEEEEEECCCCCE SIVGYFDNLPNMIYSVENENYNITLVNGTVAIVSINATGYNKVKTAENCKFVGWNYTINH EEEEECCCCCCEEEEEECCCEEEEEEECEEEEEEEECCCCCCEECCCCCEEEEEEEEECC AFFLVTDIYEMTTAKIVLTNQTTSDGDNSSTDPPSNNNRRGGSGSVTTDQTEISKNVISS EEEEEEEHHHHCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH IKSEKIKQILSNAKVVAGNTVDYNYAANLRTDSMITTVSELNQDTVIVGGPLANPYAKMY HHHHHHHHHHCCCEEEECCEEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHC DNKFDLKITNDYPGENKGVIQVKEINGYMVIYIAGSDRFGTLAALEYFKTLDELPEKPLI CCEEEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEE IEWTSTGSKLIK EEECCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]