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The map label for this gene is vhcD [H]

Identifier: 150398831

GI number: 150398831

Start: 72243

End: 72665

Strand: Reverse

Name: vhcD [H]

Synonym: Mevan_0072

Alternate gene names: 150398831

Gene position: 72665-72243 (Counterclockwise)

Preceding gene: 150398836

Following gene: 150398830

Centisome position: 4.22

GC content: 39.48

Gene sequence:

>423_bases
TTGTCTGAAGAATGGGAGCCAAAAATAGTCGGCTTTTGTTGCAACTGGTGTACATACGGTGGTGCAGATACAGCGGGAGT
TGGTAGGATGCAGTACCCCCCAAGCATTAGAATTATAAGAGTTATGTGTTCTGGAAGAATTGAACCGTCATTTATTCTAA
AAGCATTCAAAGAAGGGGCTGATGGTGTATTTATAGGTGGATGCCACCTTGGCGACTGCCACTATGATGCCGGAAACTAC
AAATGGCAAAGAAGAGTTTTGATGCTTTATGACATGCTTGATGAGCTTGGAATCGGAAAAGAAAGATTAATGCACGAATG
GATTTCTGCTTCAGAAGGGGAAAAGTTCCAGATAAAAATGAATGAAATTTATAGTAGAATAAAAACTATGGGTCCGTGCA
CCTTGAAAGAAAATATTAAATAA

Upstream 100 bases:

>100_bases
TGTTTAATTTATATATAACTAATCGTTATACTCACATCAATTAGATTAACTATTGTAGGTATTAATTTACCAAATATCTA
ATAACATCTGAGGTGAAATA

Downstream 100 bases:

>100_bases
TCGTTAAAGGTGGTATAATGGTAAAAATAGCTACAACTTGGCTTGGATGCTGTTCTGGATGCCACATAAGTCTTTTGGAT
TTACACGAAGATTTACTGTC

Product: methyl-viologen-reducing hydrogenase subunit delta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSEEWEPKIVGFCCNWCTYGGADTAGVGRMQYPPSIRIIRVMCSGRIEPSFILKAFKEGADGVFIGGCHLGDCHYDAGNY
KWQRRVLMLYDMLDELGIGKERLMHEWISASEGEKFQIKMNEIYSRIKTMGPCTLKENIK

Sequences:

>Translated_140_residues
MSEEWEPKIVGFCCNWCTYGGADTAGVGRMQYPPSIRIIRVMCSGRIEPSFILKAFKEGADGVFIGGCHLGDCHYDAGNY
KWQRRVLMLYDMLDELGIGKERLMHEWISASEGEKFQIKMNEIYSRIKTMGPCTLKENIK
>Mature_139_residues
SEEWEPKIVGFCCNWCTYGGADTAGVGRMQYPPSIRIIRVMCSGRIEPSFILKAFKEGADGVFIGGCHLGDCHYDAGNYK
WQRRVLMLYDMLDELGIGKERLMHEWISASEGEKFQIKMNEIYSRIKTMGPCTLKENIK

Specific function: Unknown

COG id: COG1908

COG function: function code C; Coenzyme F420-reducing hydrogenase, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mvhD/vhuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003813 [H]

Pfam domain/function: PF02662 FlpD [H]

EC number: NA

Molecular weight: Translated: 15984; Mature: 15853

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
10.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEWEPKIVGFCCNWCTYGGADTAGVGRMQYPPSIRIIRVMCSGRIEPSFILKAFKEGA
CCCCCCCHHEEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCC
DGVFIGGCHLGDCHYDAGNYKWQRRVLMLYDMLDELGIGKERLMHEWISASEGEKFQIKM
CEEEECCEEECCCEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEH
NEIYSRIKTMGPCTLKENIK
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SEEWEPKIVGFCCNWCTYGGADTAGVGRMQYPPSIRIIRVMCSGRIEPSFILKAFKEGA
CCCCCCHHEEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCC
DGVFIGGCHLGDCHYDAGNYKWQRRVLMLYDMLDELGIGKERLMHEWISASEGEKFQIKM
CEEEECCEEECCCEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEH
NEIYSRIKTMGPCTLKENIK
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1603063 [H]